RNA–Protein interactions for RNA: ENST00000527118.5

RBBP4-218, Transcript of RB binding protein 4, chromatin remodeling factor, human

TSL 3

Gene RBBP4, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBBP4-218	ENST00000527118	HOXC12	P31275	282 aa		13.9	□□□□□ -0.18
RBBP4-218	ENST00000527118	SESN3	P58005	492 aa		13.9	□□□□□ -0.18
RBBP4-218	ENST00000527118	NKX6-1	P78426	367 aa	Predicted RBP	13.9	□□□□□ -0.18
RBBP4-218	ENST00000527118	TSC22D1	Q15714	1073 aa		13.9	□□□□□ -0.18
RBBP4-218	ENST00000527118	GPAT3	Q53EU6	434 aa		13.9	□□□□□ -0.18
RBBP4-218	ENST00000527118	ALKBH2	Q6NS38	261 aa		13.9	□□□□□ -0.18
RBBP4-218	ENST00000527118	FRRS1	Q6ZNA5	592 aa		13.9	□□□□□ -0.18
RBBP4-218	ENST00000527118	EIF3M	Q7L2H7	374 aa	Known RBP	13.9	□□□□□ -0.18
RBBP4-218	ENST00000527118	KRTAP1-3	Q8IUG1	177 aa		13.9	□□□□□ -0.18
RBBP4-218	ENST00000527118	ZG16B	Q96DA0	208 aa		13.9	□□□□□ -0.18
RBBP4-218	ENST00000527118	CCDC115	Q96NT0	180 aa		13.9	□□□□□ -0.18
RBBP4-218	ENST00000527118	OR5B2	Q96R09	309 aa		13.9	□□□□□ -0.18
RBBP4-218	ENST00000527118	INPP5K	Q9BT40	448 aa		13.9	□□□□□ -0.18
RBBP4-218	ENST00000527118	GSX1	Q9H4S2	264 aa	Predicted RBP	13.9	□□□□□ -0.18
RBBP4-218	ENST00000527118	DLL4	Q9NR61	685 aa		13.9	□□□□□ -0.18
RBBP4-218	ENST00000527118	THAP1	Q9NVV9	213 aa		13.9	□□□□□ -0.18
RBBP4-218	ENST00000527118	BTNL2	Q9UIR0	455 aa		13.9	□□□□□ -0.18
RBBP4-218	ENST00000527118	ARID1A	O14497	2285 aa		13.9	□□□□□ -0.18
RBBP4-218	ENST00000527118	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	13.89	□□□□□ -0.19
RBBP4-218	ENST00000527118	PRAMEF27	A3QJZ7	478 aa		13.89	□□□□□ -0.19
RBBP4-218	ENST00000527118	CCDC154	A6NI56	674 aa		13.89	□□□□□ -0.19
RBBP4-218	ENST00000527118	ETV2	O00321	342 aa	Predicted RBP	13.89	□□□□□ -0.19
RBBP4-218	ENST00000527118	HDAC3	O15379	428 aa		13.89	□□□□□ -0.19
RBBP4-218	ENST00000527118	KLF4	O43474	513 aa		13.89	□□□□□ -0.19
RBBP4-218	ENST00000527118	DNAJA2	O60884	412 aa		13.89	□□□□□ -0.19
RBBP4-218	ENST00000527118	SNN	O75324	88 aa	Predicted RBP	13.89	□□□□□ -0.19
RBBP4-218	ENST00000527118	PRKD3	O94806	890 aa		13.89	□□□□□ -0.19
RBBP4-218	ENST00000527118	H6PD	O95479	791 aa		13.89	□□□□□ -0.19
RBBP4-218	ENST00000527118	PPP3CB	P16298	524 aa		13.89	□□□□□ -0.19
RBBP4-218	ENST00000527118	PGM1	P36871	562 aa		13.89	□□□□□ -0.19
RBBP4-218	ENST00000527118	CDKN2C	P42773	168 aa		13.89	□□□□□ -0.19
RBBP4-218	ENST00000527118	RAC3	P60763	192 aa		13.89	□□□□□ -0.19
RBBP4-218	ENST00000527118	MAGOH	P61326	146 aa	Known RBP	13.89	□□□□□ -0.19
RBBP4-218	ENST00000527118	MERTK	Q12866	999 aa		13.89	□□□□□ -0.19
RBBP4-218	ENST00000527118	ACKR1	Q16570	336 aa		13.89	□□□□□ -0.19
RBBP4-218	ENST00000527118	C3orf33	Q6P1S2	294 aa		13.89	□□□□□ -0.19
RBBP4-218	ENST00000527118	TFAP2E	Q6VUC0	442 aa		13.89	□□□□□ -0.19
RBBP4-218	ENST00000527118	SPATA19	Q7Z5L4	167 aa		13.89	□□□□□ -0.19
RBBP4-218	ENST00000527118	LSR	Q86X29	649 aa	Predicted RBP	13.89	□□□□□ -0.19
RBBP4-218	ENST00000527118	RNF130	Q86XS8	419 aa		13.89	□□□□□ -0.19
RBBP4-218	ENST00000527118	WFDC8	Q8IUA0	241 aa		13.89	□□□□□ -0.19
RBBP4-218	ENST00000527118	ZNF619	Q8N2I2	560 aa		13.89	□□□□□ -0.19
RBBP4-218	ENST00000527118	ST8SIA1	Q92185	356 aa		13.89	□□□□□ -0.19
RBBP4-218	ENST00000527118	OR52E6	Q96RD3	313 aa		13.89	□□□□□ -0.19
RBBP4-218	ENST00000527118	PANX1	Q96RD7	426 aa		13.89	□□□□□ -0.19
RBBP4-218	ENST00000527118	CCL19	Q99731	98 aa		13.89	□□□□□ -0.19
RBBP4-218	ENST00000527118	FANCF	Q9NPI8	374 aa		13.89	□□□□□ -0.19
RBBP4-218	ENST00000527118	GPR45	Q9Y5Y3	372 aa		13.89	□□□□□ -0.19
RBBP4-218	ENST00000527118	ZFHX3	Q15911	3703 aa		13.89	□□□□□ -0.19
RBBP4-218	ENST00000527118	ROS1	P08922	2347 aa		13.89	□□□□□ -0.19
RBBP4-218	ENST00000527118	NF1	P21359	2839 aa		13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	CLDN24	A6NM45	220 aa		13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	TRPC5OS	A6NMA1	111 aa		13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	HMGN4	O00479	90 aa		13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	SMPD2	O60906	423 aa		13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	GCM2	O75603	506 aa	Predicted RBP	13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	GSN	P06396	782 aa		13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	PGR	P06401	933 aa		13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	YES1	P07947	543 aa		13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	PGC	P20142	388 aa		13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	PSMB1	P20618	241 aa	Known RBP	13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	RYK	P34925	604 aa		13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	HPCA	P84074	193 aa		13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	CHRNE	Q04844	493 aa		13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	SYPL1	Q16563	259 aa		13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	BEX5	Q5H9J7	111 aa		13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	NXN	Q6DKJ4	435 aa		13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	PLEKHM3	Q6ZWE6	761 aa		13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	GABRG1	Q8N1C3	465 aa		13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	ANKFN1	Q8N957	763 aa		13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	FAM71C	Q8NEG0	241 aa		13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	ZNF563	Q8TA94	476 aa		13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	PNPT1	Q8TCS8	783 aa	Known RBP	13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	TMEM234	Q8WY98	164 aa		13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	ARL8A	Q96BM9	186 aa		13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	S100PBP	Q96BU1	408 aa		13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	ZNF775	Q96BV0	537 aa	Predicted RBP	13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	DNAJA3	Q96EY1	480 aa		13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	PLPPR2	Q96GM1	343 aa		13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	PSD2	Q9BQI7	771 aa		13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	SAP130	Q9H0E3	1048 aa		13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	POLE3	Q9NRF9	147 aa		13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	SERINC1	Q9NRX5	453 aa		13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	ACER3	Q9NUN7	267 aa		13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	ING1	Q9UK53	422 aa	Predicted RBP	13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	SLC35A3	Q9Y2D2	325 aa		13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	GPR52	Q9Y2T5	361 aa		13.88	□□□□□ -0.19
RBBP4-218	ENST00000527118	SMAD9	O15198	467 aa	Known RBP	13.87	□□□□□ -0.19
RBBP4-218	ENST00000527118	PLAU	P00749	431 aa		13.87	□□□□□ -0.19
RBBP4-218	ENST00000527118	ADA	P00813	363 aa		13.87	□□□□□ -0.19
RBBP4-218	ENST00000527118	GUSB	P08236	651 aa		13.87	□□□□□ -0.19
RBBP4-218	ENST00000527118	FPR1	P21462	350 aa		13.87	□□□□□ -0.19
RBBP4-218	ENST00000527118	KCNJ10	P78508	379 aa		13.87	□□□□□ -0.19
RBBP4-218	ENST00000527118	PLAUR	Q03405	335 aa		13.87	□□□□□ -0.19
RBBP4-218	ENST00000527118	RASGEF1B	Q0VAM2	473 aa		13.87	□□□□□ -0.19
RBBP4-218	ENST00000527118	COX20	Q5RI15	118 aa		13.87	□□□□□ -0.19
RBBP4-218	ENST00000527118	ATG16L1	Q676U5	607 aa		13.87	□□□□□ -0.19
RBBP4-218	ENST00000527118	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	13.87	□□□□□ -0.19
RBBP4-218	ENST00000527118	ZNF621	Q6ZSS3	439 aa		13.87	□□□□□ -0.19
RBBP4-218	ENST00000527118	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms