RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 SMAP2Q8WU79 429 aaPredicted RBP16.2■□□□□ 0.18
USH1C-205ENST00000527020 RIT1Q92963 219 aa16.2■□□□□ 0.18
USH1C-205ENST00000527020 NECTIN4Q96NY8 510 aa16.2■□□□□ 0.18
USH1C-205ENST00000527020 GPR174Q9BXC1 333 aa16.2■□□□□ 0.18
USH1C-205ENST00000527020 EVA1AQ9H8M9 152 aa16.2■□□□□ 0.18
USH1C-205ENST00000527020 B3GAT2Q9NPZ5 323 aa16.2■□□□□ 0.18
USH1C-205ENST00000527020 CDC123O75794 336 aaPredicted RBP16.2■□□□□ 0.18
USH1C-205ENST00000527020 HLA-DQB1P01920 261 aa16.2■□□□□ 0.18
USH1C-205ENST00000527020 SBK2P0C263 348 aa16.2■□□□□ 0.18
USH1C-205ENST00000527020 IGLV3-21P80748 117 aaPredicted RBP16.2■□□□□ 0.18
USH1C-205ENST00000527020 DAB2P98082 770 aa16.2■□□□□ 0.18
USH1C-205ENST00000527020 ZNF85Q03923 595 aa16.2■□□□□ 0.18
USH1C-205ENST00000527020 RSBN1Q5VWQ0 802 aaPredicted RBP16.2■□□□□ 0.18
USH1C-205ENST00000527020 ARMC6Q6NXE6 501 aa16.2■□□□□ 0.18
USH1C-205ENST00000527020 RDH10Q8IZV5 341 aa16.2■□□□□ 0.18
USH1C-205ENST00000527020 LSMEM1Q8N8F7 131 aa16.2■□□□□ 0.18
USH1C-205ENST00000527020 PEX11GQ96HA9 241 aa16.2■□□□□ 0.18
USH1C-205ENST00000527020 SPACA7Q96KW9 195 aa16.2■□□□□ 0.18
USH1C-205ENST00000527020 CTRCQ99895 268 aa16.2■□□□□ 0.18
USH1C-205ENST00000527020 LRRC61Q9BV99 259 aa16.2■□□□□ 0.18
USH1C-205ENST00000527020 MARCH7Q9H992 704 aa16.2■□□□□ 0.18
USH1C-205ENST00000527020 MALT1Q9UDY8 824 aa16.2■□□□□ 0.18
USH1C-205ENST00000527020 MEIOCA2RUB1 952 aa16.19■□□□□ 0.18
USH1C-205ENST00000527020 OR2W5A6NFC9 320 aa16.19■□□□□ 0.18
USH1C-205ENST00000527020 CHRNB1P11230 501 aa16.19■□□□□ 0.18
USH1C-205ENST00000527020 RBM34P42696 430 aaKnown RBP16.19■□□□□ 0.18
USH1C-205ENST00000527020 MAZP56270 477 aaKnown RBP16.19■□□□□ 0.18
USH1C-205ENST00000527020 RPS7P62081 194 aaKnown RBP16.19■□□□□ 0.18
USH1C-205ENST00000527020 MAT1AQ00266 395 aaKnown RBP16.19■□□□□ 0.18
USH1C-205ENST00000527020 ZNF141Q15928 474 aa16.19■□□□□ 0.18
USH1C-205ENST00000527020 ALG10BQ5I7T1 473 aa16.19■□□□□ 0.18
USH1C-205ENST00000527020 OAFQ86UD1 273 aa16.19■□□□□ 0.18
USH1C-205ENST00000527020 GATAD2AQ86YP4 633 aa16.19■□□□□ 0.18
USH1C-205ENST00000527020 RCBTB1Q8NDN9 531 aa16.19■□□□□ 0.18
USH1C-205ENST00000527020 OR5W2Q8NH69 310 aa16.19■□□□□ 0.18
USH1C-205ENST00000527020 AHCYL2Q96HN2 611 aaKnown RBP16.19■□□□□ 0.18
USH1C-205ENST00000527020 TRIM2Q9C040 744 aa16.19■□□□□ 0.18
USH1C-205ENST00000527020 INPP5EQ9NRR6 644 aa16.19■□□□□ 0.18
USH1C-205ENST00000527020 C2orf42Q9NWW7 574 aa16.19■□□□□ 0.18
USH1C-205ENST00000527020 PCDH15Q96QU1 1955 aa16.19■□□□□ 0.18
USH1C-205ENST00000527020 RIIAD1A6NNX1 92 aa16.19■□□□□ 0.18
USH1C-205ENST00000527020 B4DXG7 233 aa16.19■□□□□ 0.18
USH1C-205ENST00000527020 TFECO14948 347 aaPredicted RBP16.19■□□□□ 0.18
USH1C-205ENST00000527020 KIR2DL3P43628 341 aa16.19■□□□□ 0.18
USH1C-205ENST00000527020 MTNR1BP49286 362 aa16.19■□□□□ 0.18
USH1C-205ENST00000527020 BTG2P78543 158 aa16.19■□□□□ 0.18
USH1C-205ENST00000527020 E2F1Q01094 437 aa16.19■□□□□ 0.18
USH1C-205ENST00000527020 ERV3-1Q14264 604 aa16.19■□□□□ 0.18
USH1C-205ENST00000527020 FGFBP1Q14512 234 aa16.19■□□□□ 0.18
USH1C-205ENST00000527020 ZNHIT3Q15649 155 aaPredicted RBP16.19■□□□□ 0.18
USH1C-205ENST00000527020 ATAD3CQ5T2N8 411 aa16.19■□□□□ 0.18
USH1C-205ENST00000527020 METAP1DQ6UB28 335 aaPredicted RBP16.19■□□□□ 0.18
USH1C-205ENST00000527020 KIRREL2Q6UWL6 708 aa16.19■□□□□ 0.18
USH1C-205ENST00000527020 OR4C6Q8NH72 309 aa16.19■□□□□ 0.18
USH1C-205ENST00000527020 ST6GAL2Q96JF0 529 aa16.19■□□□□ 0.18
USH1C-205ENST00000527020 TRIM36Q9NQ86 728 aa16.19■□□□□ 0.18
USH1C-205ENST00000527020 WSB2Q9NYS7 404 aaPredicted RBP16.19■□□□□ 0.18
USH1C-205ENST00000527020 RBMX2Q9Y388 322 aaKnown RBP16.19■□□□□ 0.18
USH1C-205ENST00000527020 CACNA1IQ9P0X4 2223 aa16.18■□□□□ 0.18
USH1C-205ENST00000527020 A0A0B4J293 547 aa16.18■□□□□ 0.18
USH1C-205ENST00000527020 HTR3EA5X5Y0 456 aa16.18■□□□□ 0.18
USH1C-205ENST00000527020 CTNSO60931 367 aa16.18■□□□□ 0.18
USH1C-205ENST00000527020 SOX30O94993 753 aa16.18■□□□□ 0.18
USH1C-205ENST00000527020 GYPBP06028 91 aa16.18■□□□□ 0.18
USH1C-205ENST00000527020 PEPDP12955 493 aa16.18■□□□□ 0.18
USH1C-205ENST00000527020 RNH1P13489 461 aaKnown RBP16.18■□□□□ 0.18
USH1C-205ENST00000527020 RPS5P46782 204 aaKnown RBP16.18■□□□□ 0.18
USH1C-205ENST00000527020 SLC16A1P53985 500 aa16.18■□□□□ 0.18
USH1C-205ENST00000527020 RIN1Q13671 783 aa16.18■□□□□ 0.18
USH1C-205ENST00000527020 NDUFAF6Q330K2 333 aa16.18■□□□□ 0.18
USH1C-205ENST00000527020 RTL4Q6ZR62 310 aa16.18■□□□□ 0.18
USH1C-205ENST00000527020 SSX6Q7RTT6 188 aa16.18■□□□□ 0.18
USH1C-205ENST00000527020 Q8N402 240 aa16.18■□□□□ 0.18
USH1C-205ENST00000527020 Q8N9G6 341 aaPredicted RBP16.18■□□□□ 0.18
USH1C-205ENST00000527020 SCAIQ8N9R8 606 aa16.18■□□□□ 0.18
USH1C-205ENST00000527020 RNF31Q96EP0 1072 aa16.18■□□□□ 0.18
USH1C-205ENST00000527020 DEPDC7Q96QD5 511 aa16.18■□□□□ 0.18
USH1C-205ENST00000527020 NEK6Q9HC98 313 aa16.18■□□□□ 0.18
USH1C-205ENST00000527020 BAIAP2Q9UQB8 552 aa16.18■□□□□ 0.18
USH1C-205ENST00000527020 EML5Q05BV3 1969 aa16.18■□□□□ 0.18
USH1C-205ENST00000527020 PLPP2O43688 288 aa16.17■□□□□ 0.18
USH1C-205ENST00000527020 HYAL3O43820 417 aaPredicted RBP16.17■□□□□ 0.18
USH1C-205ENST00000527020 CT45A8P0DMV1 189 aa16.17■□□□□ 0.18
USH1C-205ENST00000527020 CT45A9P0DMV2 189 aa16.17■□□□□ 0.18
USH1C-205ENST00000527020 ZNF3P17036 446 aa16.17■□□□□ 0.18
USH1C-205ENST00000527020 HK1P19367 917 aa16.17■□□□□ 0.18
USH1C-205ENST00000527020 CFL1P23528 166 aaKnown RBP16.17■□□□□ 0.18
USH1C-205ENST00000527020 IFITM2Q01629 132 aa16.17■□□□□ 0.18
USH1C-205ENST00000527020 CRYZQ08257 329 aaKnown RBP16.17■□□□□ 0.18
USH1C-205ENST00000527020 STX4Q12846 297 aa16.17■□□□□ 0.18
USH1C-205ENST00000527020 CT45A2Q5DJT8 189 aa16.17■□□□□ 0.18
USH1C-205ENST00000527020 FAM27D1Q5T7N8 215 aa16.17■□□□□ 0.18
USH1C-205ENST00000527020 ARL9Q6T311 187 aa16.17■□□□□ 0.18
USH1C-205ENST00000527020 PARGQ86W56 976 aa16.17■□□□□ 0.18
USH1C-205ENST00000527020 C17orf47Q8NEP4 570 aa16.17■□□□□ 0.18
USH1C-205ENST00000527020 MAP3K3Q99759 626 aa16.17■□□□□ 0.18
USH1C-205ENST00000527020 KCNN2Q9H2S1 579 aa16.17■□□□□ 0.18
USH1C-205ENST00000527020 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.17■□□□□ 0.18
USH1C-205ENST00000527020 HAO2Q9NYQ3 351 aa16.17■□□□□ 0.18
USH1C-205ENST00000527020 ZNF221Q9UK13 617 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms