RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 HOXD12P35452 270 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 HTR3AP46098 478 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 TGM4P49221 684 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 FXYD6P3P58550 94 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 STARD6P59095 220 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 MXD1Q05195 221 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 SCN1BQ07699 218 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 FUT7Q11130 342 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 BAK1Q16611 211 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 CRTC2Q53ET0 693 aaPredicted RBP12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 ZMAT1Q5H9K5 638 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 DDI2Q5TDH0 399 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 NIPAL3Q6P499 406 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 PLBD1Q6P4A8 553 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 LHFPL3Q86UP9 236 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 CMIPQ8IY22 773 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 ZNF485Q8NCK3 441 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 RCBTB1Q8NDN9 531 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 C16orf52Q8NHV5 167 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 ARSGQ96EG1 525 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 AHCYL2Q96HN2 611 aaKnown RBP12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 PTCHD1Q96NR3 888 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 COQ7Q99807 217 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 JAM3Q9BX67 310 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 RAB33BQ9H082 229 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 TOR4AQ9NXH8 423 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 TNFRSF10DQ9UBN6 386 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 CLDN16Q9Y5I7 305 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 PCDH15Q96QU1 1955 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 TRDV1A0A1B0GX56 115 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 A0A1W2PQL4 384 aaPredicted RBP12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 FAM183AA6NL82 134 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 NPIPB9F8W1W9 429 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 KRT8P05787 483 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 CLEC2LP0C7M8 214 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 PAICSP22234 425 aaKnown RBP12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 CD1CP29017 333 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 GALNSP34059 522 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 SDC2P34741 201 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 ACAA2P42765 397 aaKnown RBP12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 RFX2P48378 723 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 ATP12AP54707 1039 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 ACSM1Q08AH1 577 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 BIKQ13323 160 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 ASAH1Q13510 395 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 NNATQ16517 81 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 ALG10BQ5I7T1 473 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 RSBN1Q5VWQ0 802 aaPredicted RBP12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 NKAIN2Q5VXU1 208 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 FAM131AQ6UXB0 335 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 ZNF517Q6ZMY9 492 aaPredicted RBP12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 RAB43Q86YS6 212 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 BCORP1Q8N888 145 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 OR52N1Q8NH53 320 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 MEPEQ9NQ76 525 aaPredicted RBP12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 UCKL1Q9NWZ5 548 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 PRODH2Q9UF12 536 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 SIGLEC7Q9Y286 467 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 RNF215Q9Y6U7 377 aa12.69□□□□□ -0.38
LDLRAD3-202ENST00000524419 SYNDIG1LA6NDD5 238 aa12.68□□□□□ -0.38
LDLRAD3-202ENST00000524419 OR2W5A6NFC9 320 aa12.68□□□□□ -0.38
LDLRAD3-202ENST00000524419 FABP12A6NFH5 140 aa12.68□□□□□ -0.38
LDLRAD3-202ENST00000524419 RIIAD1A6NNX1 92 aa12.68□□□□□ -0.38
LDLRAD3-202ENST00000524419 AKAP8O43823 692 aaKnown RBP12.68□□□□□ -0.38
LDLRAD3-202ENST00000524419 CD79BP40259 229 aa12.68□□□□□ -0.38
LDLRAD3-202ENST00000524419 RPS5P46782 204 aaKnown RBP12.68□□□□□ -0.38
LDLRAD3-202ENST00000524419 SLC35F1Q5T1Q4 408 aa12.68□□□□□ -0.38
LDLRAD3-202ENST00000524419 PTCRAQ6ISU1 281 aaPredicted RBP12.68□□□□□ -0.38
LDLRAD3-202ENST00000524419 MEPCEQ7L2J0 689 aaKnown RBP12.68□□□□□ -0.38
LDLRAD3-202ENST00000524419 GATAD2AQ86YP4 633 aa12.68□□□□□ -0.38
LDLRAD3-202ENST00000524419 CADM2Q8N3J6 435 aa12.68□□□□□ -0.38
LDLRAD3-202ENST00000524419 LSMEM1Q8N8F7 131 aa12.68□□□□□ -0.38
LDLRAD3-202ENST00000524419 NACC2Q96BF6 587 aa12.68□□□□□ -0.38
LDLRAD3-202ENST00000524419 ZNF486Q96H40 463 aaPredicted RBP12.68□□□□□ -0.38
LDLRAD3-202ENST00000524419 SECISBP2Q96T21 854 aaKnown RBP12.68□□□□□ -0.38
LDLRAD3-202ENST00000524419 KATNB1Q9BVA0 655 aa12.68□□□□□ -0.38
LDLRAD3-202ENST00000524419 SLC22A4Q9H015 551 aa12.68□□□□□ -0.38
LDLRAD3-202ENST00000524419 TIGARQ9NQ88 270 aa12.68□□□□□ -0.38
LDLRAD3-202ENST00000524419 CMC2Q9NRP2 79 aa12.68□□□□□ -0.38
LDLRAD3-202ENST00000524419 ZNF221Q9UK13 617 aa12.68□□□□□ -0.38
LDLRAD3-202ENST00000524419 BAIAP2Q9UQB8 552 aa12.68□□□□□ -0.38
LDLRAD3-202ENST00000524419 TMEM184BQ9Y519 407 aaPredicted RBP12.68□□□□□ -0.38
LDLRAD3-202ENST00000524419 NUP210LQ5VU65 1888 aa12.68□□□□□ -0.38
LDLRAD3-202ENST00000524419 PRUNE2Q8WUY3 3088 aa12.68□□□□□ -0.38
LDLRAD3-202ENST00000524419 TRAV27A0A087WT01 109 aa12.67□□□□□ -0.38
LDLRAD3-202ENST00000524419 A0A1W2PQ09 198 aa12.67□□□□□ -0.38
LDLRAD3-202ENST00000524419 PIAS2O75928 621 aa12.67□□□□□ -0.38
LDLRAD3-202ENST00000524419 CT45A8P0DMV1 189 aa12.67□□□□□ -0.38
LDLRAD3-202ENST00000524419 CT45A9P0DMV2 189 aa12.67□□□□□ -0.38
LDLRAD3-202ENST00000524419 CSNK1EP49674 416 aaKnown RBP12.67□□□□□ -0.38
LDLRAD3-202ENST00000524419 ARL4DP49703 201 aa12.67□□□□□ -0.38
LDLRAD3-202ENST00000524419 FOXK2Q01167 660 aa12.67□□□□□ -0.38
LDLRAD3-202ENST00000524419 FABP5Q01469 135 aa12.67□□□□□ -0.38
LDLRAD3-202ENST00000524419 KCNAB1Q14722 419 aa12.67□□□□□ -0.38
LDLRAD3-202ENST00000524419 ZNF791Q3KP31 576 aaPredicted RBP12.67□□□□□ -0.38
LDLRAD3-202ENST00000524419 CT45A2Q5DJT8 189 aa12.67□□□□□ -0.38
LDLRAD3-202ENST00000524419 TMEM53Q6P2H8 277 aa12.67□□□□□ -0.38
LDLRAD3-202ENST00000524419 ULK3Q6PHR2 472 aa12.67□□□□□ -0.38
LDLRAD3-202ENST00000524419 THSD4Q6ZMP0 1018 aa12.67□□□□□ -0.38
LDLRAD3-202ENST00000524419 LSRQ86X29 649 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms