RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 UPB1Q9UBR1 384 aa10.17□□□□□ -0.78
SDCBP-211ENST00000523441 GPC6Q9Y625 555 aaPredicted RBP10.17□□□□□ -0.78
SDCBP-211ENST00000523441 ZNF724A8MTY0 619 aa10.16□□□□□ -0.78
SDCBP-211ENST00000523441 SULT2B1O00204 365 aa10.16□□□□□ -0.78
SDCBP-211ENST00000523441 SNUPNO95149 360 aaKnown RBP10.16□□□□□ -0.78
SDCBP-211ENST00000523441 STAMBPO95630 424 aa10.16□□□□□ -0.78
SDCBP-211ENST00000523441 NGFRP08138 427 aa10.16□□□□□ -0.78
SDCBP-211ENST00000523441 SBK3P0C264 359 aa10.16□□□□□ -0.78
SDCBP-211ENST00000523441 DAOP14920 347 aa10.16□□□□□ -0.78
SDCBP-211ENST00000523441 CCNA2P20248 432 aa10.16□□□□□ -0.78
SDCBP-211ENST00000523441 SERPINB4P48594 390 aa10.16□□□□□ -0.78
SDCBP-211ENST00000523441 DIO1P49895 249 aa10.16□□□□□ -0.78
SDCBP-211ENST00000523441 FOXA1P55317 472 aa10.16□□□□□ -0.78
SDCBP-211ENST00000523441 GUCY2DQ02846 1103 aa10.16□□□□□ -0.78
SDCBP-211ENST00000523441 QPRTQ15274 297 aa10.16□□□□□ -0.78
SDCBP-211ENST00000523441 SWI5Q1ZZU3 235 aa10.16□□□□□ -0.78
SDCBP-211ENST00000523441 TSNAXIP1Q2TAA8 658 aa10.16□□□□□ -0.78
SDCBP-211ENST00000523441 TIGD2Q4W5G0 525 aa10.16□□□□□ -0.78
SDCBP-211ENST00000523441 CASP12Q6UXS9 341 aa10.16□□□□□ -0.78
SDCBP-211ENST00000523441 IKBIPQ70UQ0 350 aa10.16□□□□□ -0.78
SDCBP-211ENST00000523441 PEG10Q86TG7 708 aaKnown RBP10.16□□□□□ -0.78
SDCBP-211ENST00000523441 SVOPLQ8N434 492 aa10.16□□□□□ -0.78
SDCBP-211ENST00000523441 WDR31Q8NA23 367 aa10.16□□□□□ -0.78
SDCBP-211ENST00000523441 SEMA6DQ8NFY4 1073 aa10.16□□□□□ -0.78
SDCBP-211ENST00000523441 MRGPRX4Q96LA9 322 aa10.16□□□□□ -0.78
SDCBP-211ENST00000523441 MS4A4EQ96PG1 132 aa10.16□□□□□ -0.78
SDCBP-211ENST00000523441 TMEM237Q96Q45 408 aa10.16□□□□□ -0.78
SDCBP-211ENST00000523441 KCNS3Q9BQ31 491 aa10.16□□□□□ -0.78
SDCBP-211ENST00000523441 MRPL57Q9BQC6 102 aaKnown RBP10.16□□□□□ -0.78
SDCBP-211ENST00000523441 HHATLQ9HCP6 504 aa10.16□□□□□ -0.78
SDCBP-211ENST00000523441 SH3BP4Q9P0V3 963 aa10.16□□□□□ -0.78
SDCBP-211ENST00000523441 PCDHGB1Q9Y5G3 927 aa10.16□□□□□ -0.78
SDCBP-211ENST00000523441 SAR1BQ9Y6B6 198 aa10.16□□□□□ -0.78
SDCBP-211ENST00000523441 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.15□□□□□ -0.78
SDCBP-211ENST00000523441 TTC36A6NLP5 189 aa10.15□□□□□ -0.78
SDCBP-211ENST00000523441 POC1B-GALNT4F8VUJ3 575 aa10.15□□□□□ -0.78
SDCBP-211ENST00000523441 H3BNH8 94 aa10.15□□□□□ -0.78
SDCBP-211ENST00000523441 KIF2AO00139 706 aaPredicted RBP10.15□□□□□ -0.78
SDCBP-211ENST00000523441 ZSCAN12O43309 604 aa10.15□□□□□ -0.78
SDCBP-211ENST00000523441 MRPL33O75394 65 aaKnown RBP10.15□□□□□ -0.78
SDCBP-211ENST00000523441 INHBAP08476 426 aa10.15□□□□□ -0.78
SDCBP-211ENST00000523441 ITGA5P08648 1049 aa10.15□□□□□ -0.78
SDCBP-211ENST00000523441 OR4A8P0C604 315 aa10.15□□□□□ -0.78
SDCBP-211ENST00000523441 IFNGR1P15260 489 aa10.15□□□□□ -0.78
SDCBP-211ENST00000523441 NTF4P34130 210 aa10.15□□□□□ -0.78
SDCBP-211ENST00000523441 SERPINF1P36955 418 aa10.15□□□□□ -0.78
SDCBP-211ENST00000523441 GNG11P61952 73 aa10.15□□□□□ -0.78
SDCBP-211ENST00000523441 MERTKQ12866 999 aa10.15□□□□□ -0.78
SDCBP-211ENST00000523441 LASP1Q14847 261 aaKnown RBP10.15□□□□□ -0.78
SDCBP-211ENST00000523441 HIKESHIQ53FT3 197 aa10.15□□□□□ -0.78
SDCBP-211ENST00000523441 ZNF385BQ569K4 471 aa10.15□□□□□ -0.78
SDCBP-211ENST00000523441 ZNF678Q5SXM1 525 aa10.15□□□□□ -0.78
SDCBP-211ENST00000523441 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.15□□□□□ -0.78
SDCBP-211ENST00000523441 OR7E24Q6IFN5 339 aa10.15□□□□□ -0.78
SDCBP-211ENST00000523441 NOXRED1Q6NXP6 359 aa10.15□□□□□ -0.78
SDCBP-211ENST00000523441 KLHL24Q6TFL4 600 aa10.15□□□□□ -0.78
SDCBP-211ENST00000523441 SSX8Q7RTT4 187 aa10.15□□□□□ -0.78
SDCBP-211ENST00000523441 CCDC103Q8IW40 242 aa10.15□□□□□ -0.78
SDCBP-211ENST00000523441 ZNF540Q8NDQ6 660 aa10.15□□□□□ -0.78
SDCBP-211ENST00000523441 ZNF418Q8TF45 676 aaPredicted RBP10.15□□□□□ -0.78
SDCBP-211ENST00000523441 GIMAP5Q96F15 307 aa10.15□□□□□ -0.78
SDCBP-211ENST00000523441 ZNF382Q96SR6 550 aa10.15□□□□□ -0.78
SDCBP-211ENST00000523441 THUMPD3Q9BV44 507 aaKnown RBP10.15□□□□□ -0.78
SDCBP-211ENST00000523441 SHCBP1LQ9BZQ2 653 aa10.15□□□□□ -0.78
SDCBP-211ENST00000523441 MID1IP1Q9NPA3 183 aa10.15□□□□□ -0.78
SDCBP-211ENST00000523441 ICAM5Q9UMF0 924 aa10.15□□□□□ -0.78
SDCBP-211ENST00000523441 A0A1W2PQD3 144 aa10.14□□□□□ -0.79
SDCBP-211ENST00000523441 FAM187AA6NFU0 413 aa10.14□□□□□ -0.79
SDCBP-211ENST00000523441 TRIM49D1C9J1S8 452 aa10.14□□□□□ -0.79
SDCBP-211ENST00000523441 LILRA1O75019 489 aa10.14□□□□□ -0.79
SDCBP-211ENST00000523441 SEC22BO75396 215 aa10.14□□□□□ -0.79
SDCBP-211ENST00000523441 CRCPO75575 148 aa10.14□□□□□ -0.79
SDCBP-211ENST00000523441 TAC1P20366 129 aa10.14□□□□□ -0.79
SDCBP-211ENST00000523441 MAP3K8P41279 467 aa10.14□□□□□ -0.79
SDCBP-211ENST00000523441 CDH15P55291 814 aa10.14□□□□□ -0.79
SDCBP-211ENST00000523441 OR2B6P58173 313 aa10.14□□□□□ -0.79
SDCBP-211ENST00000523441 TUBA1BP68363 451 aa10.14□□□□□ -0.79
SDCBP-211ENST00000523441 TUBA4AP68366 448 aa10.14□□□□□ -0.79
SDCBP-211ENST00000523441 C3orf33Q6P1S2 294 aa10.14□□□□□ -0.79
SDCBP-211ENST00000523441 GALNT18Q6P9A2 607 aa10.14□□□□□ -0.79
SDCBP-211ENST00000523441 ZDHHC24Q6UX98 284 aa10.14□□□□□ -0.79
SDCBP-211ENST00000523441 TUBA1AQ71U36 451 aa10.14□□□□□ -0.79
SDCBP-211ENST00000523441 OLIG3Q7RTU3 272 aa10.14□□□□□ -0.79
SDCBP-211ENST00000523441 GLCCI1Q86VQ1 547 aa10.14□□□□□ -0.79
SDCBP-211ENST00000523441 CCNYL1Q8N7R7 359 aa10.14□□□□□ -0.79
SDCBP-211ENST00000523441 ZNF527Q8NB42 609 aa10.14□□□□□ -0.79
SDCBP-211ENST00000523441 ZFP28Q8NHY6 868 aa10.14□□□□□ -0.79
SDCBP-211ENST00000523441 PPCDCQ96CD2 204 aa10.14□□□□□ -0.79
SDCBP-211ENST00000523441 MUS81Q96NY9 551 aa10.14□□□□□ -0.79
SDCBP-211ENST00000523441 NAPGQ99747 312 aaPredicted RBP10.14□□□□□ -0.79
SDCBP-211ENST00000523441 BTBD2Q9BX70 525 aa10.14□□□□□ -0.79
SDCBP-211ENST00000523441 RAB1BQ9H0U4 201 aa10.14□□□□□ -0.79
SDCBP-211ENST00000523441 TPK1Q9H3S4 243 aa10.14□□□□□ -0.79
SDCBP-211ENST00000523441 MYOZ1Q9NP98 299 aaPredicted RBP10.14□□□□□ -0.79
SDCBP-211ENST00000523441 SLC17A5Q9NRA2 495 aa10.14□□□□□ -0.79
SDCBP-211ENST00000523441 ZCCHC3Q9NUD5 404 aaKnown RBP10.14□□□□□ -0.79
SDCBP-211ENST00000523441 PCDHB10Q9UN67 800 aa10.14□□□□□ -0.79
SDCBP-211ENST00000523441 AMDHD2Q9Y303 409 aa10.14□□□□□ -0.79
SDCBP-211ENST00000523441 UTP11Q9Y3A2 253 aaKnown RBP10.14□□□□□ -0.79
SDCBP-211ENST00000523441 BOLA1Q9Y3E2 137 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms