RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 RAE1P78406 368 aaKnown RBP11.97□□□□□ -0.49
NKX3-1-202ENST00000523261 ZP4Q12836 540 aa11.97□□□□□ -0.49
NKX3-1-202ENST00000523261 HEPACAMQ14CZ8 416 aa11.97□□□□□ -0.49
NKX3-1-202ENST00000523261 GGTA1PQ4G0N0 100 aa11.97□□□□□ -0.49
NKX3-1-202ENST00000523261 ELFN2Q5R3F8 820 aa11.97□□□□□ -0.49
NKX3-1-202ENST00000523261 FAM219BQ5XKK7 198 aa11.97□□□□□ -0.49
NKX3-1-202ENST00000523261 METTL2BQ6P1Q9 378 aaKnown RBP11.97□□□□□ -0.49
NKX3-1-202ENST00000523261 CBLN3Q6UW01 205 aa11.97□□□□□ -0.49
NKX3-1-202ENST00000523261 RBMS3Q6XE24 437 aaKnown RBP11.97□□□□□ -0.49
NKX3-1-202ENST00000523261 RAPH1Q70E73 1250 aa11.97□□□□□ -0.49
NKX3-1-202ENST00000523261 DOK3Q7L591 496 aa11.97□□□□□ -0.49
NKX3-1-202ENST00000523261 HOXB13Q92826 284 aaPredicted RBP11.97□□□□□ -0.49
NKX3-1-202ENST00000523261 ELP4Q96EB1 424 aa11.97□□□□□ -0.49
NKX3-1-202ENST00000523261 OR5B2Q96R09 309 aa11.97□□□□□ -0.49
NKX3-1-202ENST00000523261 SHCBP1LQ9BZQ2 653 aa11.97□□□□□ -0.49
NKX3-1-202ENST00000523261 DYNLRB1Q9NP97 96 aa11.97□□□□□ -0.49
NKX3-1-202ENST00000523261 UBQLN4Q9NRR5 601 aa11.97□□□□□ -0.49
NKX3-1-202ENST00000523261 RNF14Q9UBS8 474 aa11.97□□□□□ -0.49
NKX3-1-202ENST00000523261 ZDHHC2Q9UIJ5 367 aa11.97□□□□□ -0.49
NKX3-1-202ENST00000523261 A0A0G2JMP0 313 aa11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 A0A0X1KG70 313 aa11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 SH3PXD2BA1X283 911 aa11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 J3QLI3 93 aa11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 SCDO00767 359 aa11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 MRPL33O75394 65 aaKnown RBP11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 NUDT14O95848 222 aa11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 RNASE1P07998 156 aaKnown RBP11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 ADRA2AP08913 450 aa11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 HPGDP15428 266 aa11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 DIO1P49895 249 aa11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 MYBPC1Q00872 1141 aa11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 NAAAQ02083 359 aa11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 TGFBR3Q03167 851 aa11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 SLC25A53Q5H9E4 307 aa11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 KLHL24Q6TFL4 600 aa11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 SPATA21Q7Z572 469 aa11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 CDK20Q8IZL9 346 aa11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 CENPLQ8N0S6 344 aaPredicted RBP11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 OR4M2Q8NGB6 313 aa11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 CEP70Q8NHQ1 597 aa11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 GPR119Q8TDV5 335 aa11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 C16orf78Q8WTQ4 265 aa11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 SELENOMQ8WWX9 145 aa11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 NSUN5Q96P11 429 aaKnown RBP11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 CCT8L2Q96SF2 557 aa11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 CPNE1Q99829 537 aa11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 TPK1Q9H3S4 243 aa11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 ZNF442Q9H7R0 627 aa11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 EQTNQ9NQ60 294 aa11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 SLC7A10Q9NS82 523 aa11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 NMRK1Q9NWW6 199 aa11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 TXNDC16Q9P2K2 825 aa11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 VPS29Q9UBQ0 182 aa11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 ICAM5Q9UMF0 924 aa11.96□□□□□ -0.49
NKX3-1-202ENST00000523261 TENM3Q9P273 2699 aa11.95□□□□□ -0.5
NKX3-1-202ENST00000523261 GNG14A0A1W2PPG7 69 aa11.95□□□□□ -0.5
NKX3-1-202ENST00000523261 M0QZ24 198 aa11.95□□□□□ -0.5
NKX3-1-202ENST00000523261 GPR171O14626 319 aa11.95□□□□□ -0.5
NKX3-1-202ENST00000523261 PCDH7O60245 1069 aa11.95□□□□□ -0.5
NKX3-1-202ENST00000523261 KCNK2O95069 426 aa11.95□□□□□ -0.5
NKX3-1-202ENST00000523261 NPR2P20594 1047 aa11.95□□□□□ -0.5
NKX3-1-202ENST00000523261 COL8A2P25067 703 aa11.95□□□□□ -0.5
NKX3-1-202ENST00000523261 CALCRP30988 508 aa11.95□□□□□ -0.5
NKX3-1-202ENST00000523261 THBS4P35443 961 aa11.95□□□□□ -0.5
NKX3-1-202ENST00000523261 P2RX1P51575 399 aa11.95□□□□□ -0.5
NKX3-1-202ENST00000523261 SUMO3P55854 103 aaPredicted RBP11.95□□□□□ -0.5
NKX3-1-202ENST00000523261 ARL4CP56559 192 aa11.95□□□□□ -0.5
NKX3-1-202ENST00000523261 HGFACQ04756 655 aa11.95□□□□□ -0.5
NKX3-1-202ENST00000523261 PDIA2Q13087 525 aaKnown RBP11.95□□□□□ -0.5
NKX3-1-202ENST00000523261 HIKESHIQ53FT3 197 aa11.95□□□□□ -0.5
NKX3-1-202ENST00000523261 LEG1Q6P5S2 330 aa11.95□□□□□ -0.5
NKX3-1-202ENST00000523261 Q6ZPA2 131 aa11.95□□□□□ -0.5
NKX3-1-202ENST00000523261 TMPPEQ6ZT21 453 aa11.95□□□□□ -0.5
NKX3-1-202ENST00000523261 RHOUQ7L0Q8 258 aa11.95□□□□□ -0.5
NKX3-1-202ENST00000523261 MTDHQ86UE4 582 aaKnown RBP11.95□□□□□ -0.5
NKX3-1-202ENST00000523261 SLC16A11Q8NCK7 471 aa11.95□□□□□ -0.5
NKX3-1-202ENST00000523261 NUP37Q8NFH4 326 aa11.95□□□□□ -0.5
NKX3-1-202ENST00000523261 OR4F15Q8NGB8 312 aa11.95□□□□□ -0.5
NKX3-1-202ENST00000523261 OR4F6Q8NGB9 312 aa11.95□□□□□ -0.5
NKX3-1-202ENST00000523261 PHOSPHO1Q8TCT1 267 aa11.95□□□□□ -0.5
NKX3-1-202ENST00000523261 WFDC12Q8WWY7 111 aa11.95□□□□□ -0.5
NKX3-1-202ENST00000523261 GLIPR2Q9H4G4 154 aa11.95□□□□□ -0.5
NKX3-1-202ENST00000523261 CPSF2Q9P2I0 782 aaKnown RBP11.95□□□□□ -0.5
NKX3-1-202ENST00000523261 UPB1Q9UBR1 384 aa11.95□□□□□ -0.5
NKX3-1-202ENST00000523261 OPN4Q9UHM6 478 aa11.95□□□□□ -0.5
NKX3-1-202ENST00000523261 MMP24Q9Y5R2 645 aa11.95□□□□□ -0.5
NKX3-1-202ENST00000523261 CCDC189A1A4V9 331 aa11.94□□□□□ -0.5
NKX3-1-202ENST00000523261 ETV2O00321 342 aaPredicted RBP11.94□□□□□ -0.5
NKX3-1-202ENST00000523261 PLPP2O43688 288 aa11.94□□□□□ -0.5
NKX3-1-202ENST00000523261 MPZL1O95297 269 aa11.94□□□□□ -0.5
NKX3-1-202ENST00000523261 ANPEPP15144 967 aa11.94□□□□□ -0.5
NKX3-1-202ENST00000523261 ACHEP22303 614 aa11.94□□□□□ -0.5
NKX3-1-202ENST00000523261 TYK2P29597 1187 aa11.94□□□□□ -0.5
NKX3-1-202ENST00000523261 LCN1P31025 176 aa11.94□□□□□ -0.5
NKX3-1-202ENST00000523261 SLC16A1P53985 500 aa11.94□□□□□ -0.5
NKX3-1-202ENST00000523261 SLC9B1Q4ZJI4 515 aa11.94□□□□□ -0.5
NKX3-1-202ENST00000523261 TSPO2Q5TGU0 170 aa11.94□□□□□ -0.5
NKX3-1-202ENST00000523261 ACSM5Q6NUN0 579 aa11.94□□□□□ -0.5
NKX3-1-202ENST00000523261 C3orf33Q6P1S2 294 aa11.94□□□□□ -0.5
NKX3-1-202ENST00000523261 ANKRD16Q6P6B7 361 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms