RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 ZFP28Q8NHY6 868 aa9.77□□□□□ -0.85
RNF4-218ENST00000513284 HOXB13Q92826 284 aaPredicted RBP9.77□□□□□ -0.85
RNF4-218ENST00000513284 HPS1Q92902 700 aa9.77□□□□□ -0.85
RNF4-218ENST00000513284 ELP4Q96EB1 424 aa9.77□□□□□ -0.85
RNF4-218ENST00000513284 METTL2AQ96IZ6 378 aaKnown RBP9.77□□□□□ -0.85
RNF4-218ENST00000513284 MRGPRX4Q96LA9 322 aa9.77□□□□□ -0.85
RNF4-218ENST00000513284 MID1IP1Q9NPA3 183 aa9.77□□□□□ -0.85
RNF4-218ENST00000513284 MYNNQ9NPC7 610 aa9.77□□□□□ -0.85
RNF4-218ENST00000513284 ARMCX1Q9P291 453 aa9.77□□□□□ -0.85
RNF4-218ENST00000513284 DCDC2Q9UHG0 476 aa9.77□□□□□ -0.85
RNF4-218ENST00000513284 ZNF281Q9Y2X9 895 aa9.77□□□□□ -0.85
RNF4-218ENST00000513284 A0A1W2PNR3 127 aa9.76□□□□□ -0.85
RNF4-218ENST00000513284 ZNF724A8MTY0 619 aa9.76□□□□□ -0.85
RNF4-218ENST00000513284 KIF2AO00139 706 aaPredicted RBP9.76□□□□□ -0.85
RNF4-218ENST00000513284 CYTIPO60759 359 aa9.76□□□□□ -0.85
RNF4-218ENST00000513284 GLRA3O75311 464 aa9.76□□□□□ -0.85
RNF4-218ENST00000513284 RSL1D1O76021 490 aaKnown RBP9.76□□□□□ -0.85
RNF4-218ENST00000513284 NGFRP08138 427 aa9.76□□□□□ -0.85
RNF4-218ENST00000513284 IGFBP1P08833 259 aaPredicted RBP9.76□□□□□ -0.85
RNF4-218ENST00000513284 MYL2P10916 166 aa9.76□□□□□ -0.85
RNF4-218ENST00000513284 CREB1P16220 341 aa9.76□□□□□ -0.85
RNF4-218ENST00000513284 APEX1P27695 318 aaKnown RBP9.76□□□□□ -0.85
RNF4-218ENST00000513284 GPC1P35052 558 aa9.76□□□□□ -0.85
RNF4-218ENST00000513284 HTR6P50406 440 aa9.76□□□□□ -0.85
RNF4-218ENST00000513284 HILS1P60008 231 aa9.76□□□□□ -0.85
RNF4-218ENST00000513284 RAC3P60763 192 aa9.76□□□□□ -0.85
RNF4-218ENST00000513284 TOMM34Q15785 309 aaPredicted RBP9.76□□□□□ -0.85
RNF4-218ENST00000513284 MIDNQ504T8 468 aa9.76□□□□□ -0.85
RNF4-218ENST00000513284 CFAP157Q5JU67 520 aa9.76□□□□□ -0.85
RNF4-218ENST00000513284 FBXW9Q5XUX1 488 aa9.76□□□□□ -0.85
RNF4-218ENST00000513284 C1orf229Q6ZS94 237 aaPredicted RBP9.76□□□□□ -0.85
RNF4-218ENST00000513284 IFT20Q8IY31 132 aa9.76□□□□□ -0.85
RNF4-218ENST00000513284 TMEM151AQ8N4L1 468 aa9.76□□□□□ -0.85
RNF4-218ENST00000513284 ZNF540Q8NDQ6 660 aa9.76□□□□□ -0.85
RNF4-218ENST00000513284 ATP6V1C2Q8NEY4 427 aa9.76□□□□□ -0.85
RNF4-218ENST00000513284 CEP70Q8NHQ1 597 aa9.76□□□□□ -0.85
RNF4-218ENST00000513284 FBXO27Q8NI29 283 aa9.76□□□□□ -0.85
RNF4-218ENST00000513284 VRK1Q99986 396 aaPredicted RBP9.76□□□□□ -0.85
RNF4-218ENST00000513284 TRMOQ9BU70 441 aa9.76□□□□□ -0.85
RNF4-218ENST00000513284 GLIPR2Q9H4G4 154 aa9.76□□□□□ -0.85
RNF4-218ENST00000513284 TAS2R7Q9NYW3 318 aa9.76□□□□□ -0.85
RNF4-218ENST00000513284 KLHL9Q9P2J3 617 aa9.76□□□□□ -0.85
RNF4-218ENST00000513284 PSMC3IPQ9P2W1 217 aaPredicted RBP9.76□□□□□ -0.85
RNF4-218ENST00000513284 MID2Q9UJV3 735 aa9.76□□□□□ -0.85
RNF4-218ENST00000513284 PCDHB10Q9UN67 800 aa9.76□□□□□ -0.85
RNF4-218ENST00000513284 TRAF6Q9Y4K3 522 aa9.76□□□□□ -0.85
RNF4-218ENST00000513284 TIMM22Q9Y584 194 aa9.76□□□□□ -0.85
RNF4-218ENST00000513284 FKBP7Q9Y680 259 aa9.76□□□□□ -0.85
RNF4-218ENST00000513284 ATP6V1G2-DDX39BF2Z307 99 aa9.75□□□□□ -0.85
RNF4-218ENST00000513284 NKX2-2O95096 273 aa9.75□□□□□ -0.85
RNF4-218ENST00000513284 HPGDP15428 266 aa9.75□□□□□ -0.85
RNF4-218ENST00000513284 PGCP20142 388 aa9.75□□□□□ -0.85
RNF4-218ENST00000513284 ZNF41P51814 821 aaPredicted RBP9.75□□□□□ -0.85
RNF4-218ENST00000513284 CHN2P52757 468 aa9.75□□□□□ -0.85
RNF4-218ENST00000513284 SLC29A2Q14542 456 aa9.75□□□□□ -0.85
RNF4-218ENST00000513284 FAM71E1Q6IPT2 247 aa9.75□□□□□ -0.85
RNF4-218ENST00000513284 CBLN3Q6UW01 205 aa9.75□□□□□ -0.85
RNF4-218ENST00000513284 TREML4Q6UXN2 200 aa9.75□□□□□ -0.85
RNF4-218ENST00000513284 USP43Q70EL4 1123 aa9.75□□□□□ -0.85
RNF4-218ENST00000513284 ZCCHC24Q8N2G6 241 aaKnown RBP9.75□□□□□ -0.85
RNF4-218ENST00000513284 CCNYL1Q8N7R7 359 aa9.75□□□□□ -0.85
RNF4-218ENST00000513284 NUP43Q8NFH3 380 aa9.75□□□□□ -0.85
RNF4-218ENST00000513284 B4GALNT2Q8NHY0 566 aa9.75□□□□□ -0.85
RNF4-218ENST00000513284 KIF18AQ8NI77 898 aa9.75□□□□□ -0.85
RNF4-218ENST00000513284 ZFP90Q8TF47 636 aa9.75□□□□□ -0.85
RNF4-218ENST00000513284 SNX18Q96RF0 628 aa9.75□□□□□ -0.85
RNF4-218ENST00000513284 MYOZ1Q9NP98 299 aaPredicted RBP9.75□□□□□ -0.85
RNF4-218ENST00000513284 ESM1Q9NQ30 184 aa9.75□□□□□ -0.85
RNF4-218ENST00000513284 MOKQ9UQ07 419 aa9.75□□□□□ -0.85
RNF4-218ENST00000513284 POLR3HQ9Y535 204 aaPredicted RBP9.75□□□□□ -0.85
RNF4-218ENST00000513284 NOTCH1P46531 2555 aa9.75□□□□□ -0.85
RNF4-218ENST00000513284 CIB4A0PJX0 185 aa9.74□□□□□ -0.85
RNF4-218ENST00000513284 TRIM77I1YAP6 450 aa9.74□□□□□ -0.85
RNF4-218ENST00000513284 PDLIM1O00151 329 aa9.74□□□□□ -0.85
RNF4-218ENST00000513284 SLC28A1O00337 649 aa9.74□□□□□ -0.85
RNF4-218ENST00000513284 PDPK1O15530 556 aa9.74□□□□□ -0.85
RNF4-218ENST00000513284 RIPK2O43353 540 aa9.74□□□□□ -0.85
RNF4-218ENST00000513284 HSPA4LO95757 839 aa9.74□□□□□ -0.85
RNF4-218ENST00000513284 CHEK2O96017 543 aa9.74□□□□□ -0.85
RNF4-218ENST00000513284 AVPP01185 164 aa9.74□□□□□ -0.85
RNF4-218ENST00000513284 ITGA5P08648 1049 aa9.74□□□□□ -0.85
RNF4-218ENST00000513284 PRPS2P11908 318 aa9.74□□□□□ -0.85
RNF4-218ENST00000513284 NEFHP12036 1026 aa9.74□□□□□ -0.85
RNF4-218ENST00000513284 ELK4P28324 431 aa9.74□□□□□ -0.85
RNF4-218ENST00000513284 GCAP28676 217 aa9.74□□□□□ -0.85
RNF4-218ENST00000513284 LCN1P31025 176 aa9.74□□□□□ -0.85
RNF4-218ENST00000513284 SERPINF1P36955 418 aa9.74□□□□□ -0.85
RNF4-218ENST00000513284 EIF1P41567 113 aaKnown RBP9.74□□□□□ -0.85
RNF4-218ENST00000513284 CCT5P48643 541 aa9.74□□□□□ -0.85
RNF4-218ENST00000513284 RIN1Q13671 783 aa9.74□□□□□ -0.85
RNF4-218ENST00000513284 CCDC153Q494R4 210 aa9.74□□□□□ -0.85
RNF4-218ENST00000513284 ZYG11AQ6WRX3 759 aa9.74□□□□□ -0.85
RNF4-218ENST00000513284 THSD4Q6ZMP0 1018 aa9.74□□□□□ -0.85
RNF4-218ENST00000513284 TRIM46Q7Z4K8 759 aa9.74□□□□□ -0.85
RNF4-218ENST00000513284 GALNT5Q7Z7M9 940 aa9.74□□□□□ -0.85
RNF4-218ENST00000513284 MISPQ8IVT2 679 aa9.74□□□□□ -0.85
RNF4-218ENST00000513284 ZNF100Q8IYN0 542 aa9.74□□□□□ -0.85
RNF4-218ENST00000513284 SVOPLQ8N434 492 aa9.74□□□□□ -0.85
RNF4-218ENST00000513284 CDRT4Q8N9R6 151 aa9.74□□□□□ -0.85
RNF4-218ENST00000513284 CCDC63Q8NA47 563 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms