RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 CGREF1Q99674 301 aa10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 CCDC106Q9BWC9 280 aa10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 SFXN3Q9BWM7 321 aa10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 TRIM8Q9BZR9 551 aa10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 TMEM38AQ9H6F2 299 aa10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 MRGBPQ9NV56 204 aa10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 RLIMQ9NVW2 624 aa10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 PAQR5Q9NXK6 330 aaPredicted RBP10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 CACNA1CQ13936 2221 aa10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 KIAA1549Q9HCM3 1950 aa10.54□□□□□ -0.72
HMGXB3-203ENST00000510472 CRYBG3Q68DQ2 2970 aa10.53□□□□□ -0.72
HMGXB3-203ENST00000510472 A8MXE2 369 aa10.53□□□□□ -0.72
HMGXB3-203ENST00000510472 EIF1AYO14602 144 aaKnown RBP10.53□□□□□ -0.72
HMGXB3-203ENST00000510472 TNFSF11O14788 317 aa10.53□□□□□ -0.72
HMGXB3-203ENST00000510472 CXCL13O43927 109 aa10.53□□□□□ -0.72
HMGXB3-203ENST00000510472 CGAP01215 116 aa10.53□□□□□ -0.72
HMGXB3-203ENST00000510472 THBS1P07996 1170 aa10.53□□□□□ -0.72
HMGXB3-203ENST00000510472 COX6B1P14854 86 aa10.53□□□□□ -0.72
HMGXB3-203ENST00000510472 ETS2P15036 469 aa10.53□□□□□ -0.72
HMGXB3-203ENST00000510472 IL7RP16871 459 aa10.53□□□□□ -0.72
HMGXB3-203ENST00000510472 ACAA2P42765 397 aaKnown RBP10.53□□□□□ -0.72
HMGXB3-203ENST00000510472 ASCL1P50553 236 aa10.53□□□□□ -0.72
HMGXB3-203ENST00000510472 GZMMP51124 257 aa10.53□□□□□ -0.72
HMGXB3-203ENST00000510472 CARD18P57730 90 aa10.53□□□□□ -0.72
HMGXB3-203ENST00000510472 SF3A3Q12874 501 aaKnown RBP eCLIP10.53□□□□□ -0.72
HMGXB3-203ENST00000510472 GNA13Q14344 377 aa10.53□□□□□ -0.72
HMGXB3-203ENST00000510472 ZSWIM7Q19AV6 140 aa10.53□□□□□ -0.72
HMGXB3-203ENST00000510472 TMEM176BQ3YBM2 270 aaPredicted RBP10.53□□□□□ -0.72
HMGXB3-203ENST00000510472 MRPL2Q5T653 305 aaKnown RBP10.53□□□□□ -0.72
HMGXB3-203ENST00000510472 RNF220Q5VTB9 566 aa10.53□□□□□ -0.72
HMGXB3-203ENST00000510472 OR2A2Q6IF42 318 aa10.53□□□□□ -0.72
HMGXB3-203ENST00000510472 ADGRG3Q86Y34 549 aa10.53□□□□□ -0.72
HMGXB3-203ENST00000510472 PTOV1Q86YD1 416 aa10.53□□□□□ -0.72
HMGXB3-203ENST00000510472 PEX5LQ8IYB4 626 aa10.53□□□□□ -0.72
HMGXB3-203ENST00000510472 GCNT2Q8N0V5 402 aa10.53□□□□□ -0.72
HMGXB3-203ENST00000510472 WDR60Q8WVS4 1066 aa10.53□□□□□ -0.72
HMGXB3-203ENST00000510472 TMEM234Q8WY98 164 aa10.53□□□□□ -0.72
HMGXB3-203ENST00000510472 STARD4Q96DR4 205 aa10.53□□□□□ -0.72
HMGXB3-203ENST00000510472 ADAM19Q9H013 955 aa10.53□□□□□ -0.72
HMGXB3-203ENST00000510472 TMEM185BQ9H7F4 350 aa10.53□□□□□ -0.72
HMGXB3-203ENST00000510472 COQ10BQ9H8M1 238 aa10.53□□□□□ -0.72
HMGXB3-203ENST00000510472 FXYD1O00168 92 aa10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 AP3D1O14617 1153 aa10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 ANGPT2O15123 496 aa10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 SLC22A2O15244 555 aa10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 GCM2O75603 506 aaPredicted RBP10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 ME2P23368 584 aa10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 RYKP34925 604 aa10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 APOBEC1P41238 236 aaKnown RBP10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 EIF1AXP47813 144 aaKnown RBP10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 PCYT1AP49585 367 aa10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 CCR4P51679 360 aa10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 CDK6Q00534 326 aa10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 EPS8Q12929 822 aa10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 SELENBP1Q13228 472 aa10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 SELPLGQ14242 412 aa10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 SGCBQ16585 318 aa10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 LIN52Q52LA3 116 aa10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 COQ5Q5HYK3 327 aa10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 GCNT6Q5T4J0 391 aa10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 HBMQ6B0K9 141 aa10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 MEX3BQ6ZN04 569 aaKnown RBP10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 ZNF836Q6ZNA1 936 aa10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 GRINAQ7Z429 371 aa10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 NET1Q7Z628 596 aaPredicted RBP10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 BTLAQ7Z6A9 289 aa10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 DHDDSQ86SQ9 333 aa10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 MCEMP1Q8IX19 187 aa10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 ZNF440Q8IYI8 595 aa10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 TMCO5AQ8N6Q1 288 aa10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 BBS10Q8TAM1 723 aa10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 RNASE6Q93091 150 aaKnown RBP10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 C14orf79Q96F83 325 aa10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 SPATA9Q9BWV2 254 aa10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 SRXN1Q9BYN0 137 aa10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 PIGMQ9H3S5 423 aa10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 KAT8Q9H7Z6 458 aaKnown RBP10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 FOXD3Q9UJU5 478 aaPredicted RBP10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 ZNF232Q9UNY5 417 aa10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 CORO2BQ9UQ03 480 aa10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 ZNF443Q9Y2A4 671 aaPredicted RBP10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 IFT52Q9Y366 437 aa10.52□□□□□ -0.73
HMGXB3-203ENST00000510472 FBN2P35556 2912 aa10.51□□□□□ -0.73
HMGXB3-203ENST00000510472 CENPEQ02224 2701 aa10.51□□□□□ -0.73
HMGXB3-203ENST00000510472 CFAP73A6NFT4 308 aa10.51□□□□□ -0.73
HMGXB3-203ENST00000510472 GJE1A6NN92 205 aa10.51□□□□□ -0.73
HMGXB3-203ENST00000510472 EVPLLA8MZ36 301 aa10.51□□□□□ -0.73
HMGXB3-203ENST00000510472 MSTNO14793 375 aa10.51□□□□□ -0.73
HMGXB3-203ENST00000510472 NPPAP01160 153 aa10.51□□□□□ -0.73
HMGXB3-203ENST00000510472 PABPC4LP0CB38 370 aaKnown RBP10.51□□□□□ -0.73
HMGXB3-203ENST00000510472 FCGR2AP12318 317 aa10.51□□□□□ -0.73
HMGXB3-203ENST00000510472 PRG2P13727 222 aa10.51□□□□□ -0.73
HMGXB3-203ENST00000510472 FKBP2P26885 142 aaKnown RBP10.51□□□□□ -0.73
HMGXB3-203ENST00000510472 SFTPDP35247 375 aa10.51□□□□□ -0.73
HMGXB3-203ENST00000510472 SLC1A3P43003 542 aa10.51□□□□□ -0.73
HMGXB3-203ENST00000510472 IDH2P48735 452 aaKnown RBP10.51□□□□□ -0.73
HMGXB3-203ENST00000510472 SEC24CP53992 1094 aa10.51□□□□□ -0.73
HMGXB3-203ENST00000510472 PCBP3P57721 371 aaKnown RBP10.51□□□□□ -0.73
HMGXB3-203ENST00000510472 RAC3P60763 192 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms