RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 CSMD3Q7Z407 3707 aa9.24□□□□□ -0.93
SNF8-207ENST00000509995 VSTM5A8MXK1 200 aa9.24□□□□□ -0.93
SNF8-207ENST00000509995 CCDC188H7C350 402 aa9.24□□□□□ -0.93
SNF8-207ENST00000509995 PIP5K1BO14986 540 aa9.24□□□□□ -0.93
SNF8-207ENST00000509995 RP2O75695 350 aa9.24□□□□□ -0.93
SNF8-207ENST00000509995 IGKV1D-16P01601 117 aa9.24□□□□□ -0.93
SNF8-207ENST00000509995 NGFRP08138 427 aa9.24□□□□□ -0.93
SNF8-207ENST00000509995 CECR9P0C854 216 aa9.24□□□□□ -0.93
SNF8-207ENST00000509995 CD1DP15813 335 aa9.24□□□□□ -0.93
SNF8-207ENST00000509995 GPC1P35052 558 aa9.24□□□□□ -0.93
SNF8-207ENST00000509995 PIK3CGP48736 1102 aa9.24□□□□□ -0.93
SNF8-207ENST00000509995 MRPS11P82912 194 aaKnown RBP9.24□□□□□ -0.93
SNF8-207ENST00000509995 HGFACQ04756 655 aa9.24□□□□□ -0.93
SNF8-207ENST00000509995 PDK3Q15120 406 aa9.24□□□□□ -0.93
SNF8-207ENST00000509995 KLF17Q5JT82 389 aaPredicted RBP9.24□□□□□ -0.93
SNF8-207ENST00000509995 METTL4Q8N3J2 472 aa9.24□□□□□ -0.93
SNF8-207ENST00000509995 TEX9Q8N6V9 391 aa9.24□□□□□ -0.93
SNF8-207ENST00000509995 B4GALNT2Q8NHY0 566 aa9.24□□□□□ -0.93
SNF8-207ENST00000509995 ZNF416Q9BWM5 594 aa9.24□□□□□ -0.93
SNF8-207ENST00000509995 FAIM2Q9BWQ8 316 aa9.24□□□□□ -0.93
SNF8-207ENST00000509995 GATA5Q9BWX5 397 aaPredicted RBP9.24□□□□□ -0.93
SNF8-207ENST00000509995 KCNF1Q9H3M0 494 aa9.24□□□□□ -0.93
SNF8-207ENST00000509995 TCF7L1Q9HCS4 588 aa9.24□□□□□ -0.93
SNF8-207ENST00000509995 OBP2BQ9NPH6 170 aa9.24□□□□□ -0.93
SNF8-207ENST00000509995 NECAP2Q9NVZ3 263 aa9.24□□□□□ -0.93
SNF8-207ENST00000509995 AHSPQ9NZD4 102 aa9.24□□□□□ -0.93
SNF8-207ENST00000509995 REXO2Q9Y3B8 237 aaKnown RBP9.24□□□□□ -0.93
SNF8-207ENST00000509995 ZNF716A6NP11 495 aa9.23□□□□□ -0.93
SNF8-207ENST00000509995 M0R233 179 aa9.23□□□□□ -0.93
SNF8-207ENST00000509995 UGDHO60701 494 aa9.23□□□□□ -0.93
SNF8-207ENST00000509995 MRPL33O75394 65 aaKnown RBP9.23□□□□□ -0.93
SNF8-207ENST00000509995 BANF1O75531 89 aa9.23□□□□□ -0.93
SNF8-207ENST00000509995 KCNH1O95259 989 aa9.23□□□□□ -0.93
SNF8-207ENST00000509995 IGHV2-5P01817 119 aa9.23□□□□□ -0.93
SNF8-207ENST00000509995 OPN1MWP04001 364 aa9.23□□□□□ -0.93
SNF8-207ENST00000509995 OPN1MW2P0DN77 364 aa9.23□□□□□ -0.93
SNF8-207ENST00000509995 OPN1MW3P0DN78 364 aa9.23□□□□□ -0.93
SNF8-207ENST00000509995 ATP4BP51164 291 aa9.23□□□□□ -0.93
SNF8-207ENST00000509995 SLC29A2Q14542 456 aa9.23□□□□□ -0.93
SNF8-207ENST00000509995 HIKESHIQ53FT3 197 aa9.23□□□□□ -0.93
SNF8-207ENST00000509995 GLE1Q53GS7 698 aaKnown RBP9.23□□□□□ -0.93
SNF8-207ENST00000509995 REP15Q6BDI9 236 aa9.23□□□□□ -0.93
SNF8-207ENST00000509995 ANKRD16Q6P6B7 361 aa9.23□□□□□ -0.93
SNF8-207ENST00000509995 TRMT10BQ6PF06 316 aaKnown RBP9.23□□□□□ -0.93
SNF8-207ENST00000509995 ADGRG3Q86Y34 549 aa9.23□□□□□ -0.93
SNF8-207ENST00000509995 TREML1Q86YW5 311 aa9.23□□□□□ -0.93
SNF8-207ENST00000509995 MISPQ8IVT2 679 aa9.23□□□□□ -0.93
SNF8-207ENST00000509995 WDFY1Q8IWB7 410 aa9.23□□□□□ -0.93
SNF8-207ENST00000509995 SAMD14Q8IZD0 417 aaPredicted RBP9.23□□□□□ -0.93
SNF8-207ENST00000509995 FAM9CQ8IZT9 166 aa9.23□□□□□ -0.93
SNF8-207ENST00000509995 NOA1Q8NC60 698 aaKnown RBP9.23□□□□□ -0.93
SNF8-207ENST00000509995 DEFB108BQ8NET1 73 aa9.23□□□□□ -0.93
SNF8-207ENST00000509995 OR4C3Q8NH37 302 aa9.23□□□□□ -0.93
SNF8-207ENST00000509995 CEP70Q8NHQ1 597 aa9.23□□□□□ -0.93
SNF8-207ENST00000509995 JADE3Q92613 823 aa9.23□□□□□ -0.93
SNF8-207ENST00000509995 PPP1R14AQ96A00 147 aa9.23□□□□□ -0.93
SNF8-207ENST00000509995 SEC61A2Q9H9S3 476 aa9.23□□□□□ -0.93
SNF8-207ENST00000509995 NUDT4Q9NZJ9 180 aa9.23□□□□□ -0.93
SNF8-207ENST00000509995 C1RLQ9NZP8 487 aa9.23□□□□□ -0.93
SNF8-207ENST00000509995 CRNNQ9UBG3 495 aaPredicted RBP9.23□□□□□ -0.93
SNF8-207ENST00000509995 UPB1Q9UBR1 384 aa9.23□□□□□ -0.93
SNF8-207ENST00000509995 REV1Q9UBZ9 1251 aa9.23□□□□□ -0.93
SNF8-207ENST00000509995 RNF114Q9Y508 228 aa9.23□□□□□ -0.93
SNF8-207ENST00000509995 GPC6Q9Y625 555 aaPredicted RBP9.23□□□□□ -0.93
SNF8-207ENST00000509995 A0A087WV62 115 aa9.22□□□□□ -0.93
SNF8-207ENST00000509995 GXYLT2A0PJZ3 443 aa9.22□□□□□ -0.93
SNF8-207ENST00000509995 GPR171O14626 319 aa9.22□□□□□ -0.93
SNF8-207ENST00000509995 CBFA2T2O43439 604 aa9.22□□□□□ -0.93
SNF8-207ENST00000509995 SYNGR3O43761 229 aa9.22□□□□□ -0.93
SNF8-207ENST00000509995 CLPXO76031 633 aa9.22□□□□□ -0.93
SNF8-207ENST00000509995 NCR1O76036 304 aa9.22□□□□□ -0.93
SNF8-207ENST00000509995 PSMG1O95456 288 aa9.22□□□□□ -0.93
SNF8-207ENST00000509995 H6PDO95479 791 aa9.22□□□□□ -0.93
SNF8-207ENST00000509995 KRT14P02533 472 aa9.22□□□□□ -0.93
SNF8-207ENST00000509995 CRYBA1P05813 215 aa9.22□□□□□ -0.93
SNF8-207ENST00000509995 GSNP06396 782 aa9.22□□□□□ -0.93
SNF8-207ENST00000509995 CSF1P09603 554 aa9.22□□□□□ -0.93
SNF8-207ENST00000509995 TCN1P20061 433 aaPredicted RBP9.22□□□□□ -0.93
SNF8-207ENST00000509995 MPGP29372 298 aa9.22□□□□□ -0.93
SNF8-207ENST00000509995 MTNR1AP48039 350 aa9.22□□□□□ -0.93
SNF8-207ENST00000509995 ATP6V0D1P61421 351 aa9.22□□□□□ -0.93
SNF8-207ENST00000509995 PDCD1Q15116 288 aa9.22□□□□□ -0.93
SNF8-207ENST00000509995 TRADDQ15628 312 aa9.22□□□□□ -0.93
SNF8-207ENST00000509995 CD226Q15762 336 aa9.22□□□□□ -0.93
SNF8-207ENST00000509995 AVPI1Q5T686 147 aa9.22□□□□□ -0.93
SNF8-207ENST00000509995 CASP12Q6UXS9 341 aa9.22□□□□□ -0.93
SNF8-207ENST00000509995 NAT8LQ8N9F0 302 aa9.22□□□□□ -0.93
SNF8-207ENST00000509995 L3MBTL4Q8NA19 623 aa9.22□□□□□ -0.93
SNF8-207ENST00000509995 EXOSC8Q96B26 276 aaKnown RBP9.22□□□□□ -0.93
SNF8-207ENST00000509995 BOD1Q96IK1 185 aa9.22□□□□□ -0.93
SNF8-207ENST00000509995 OR5B2Q96R09 309 aa9.22□□□□□ -0.93
SNF8-207ENST00000509995 NAT9Q9BTE0 207 aa9.22□□□□□ -0.93
SNF8-207ENST00000509995 LMF2Q9BU23 707 aaKnown RBP9.22□□□□□ -0.93
SNF8-207ENST00000509995 MS4A5Q9H3V2 200 aa9.22□□□□□ -0.93
SNF8-207ENST00000509995 SLC7A10Q9NS82 523 aa9.22□□□□□ -0.93
SNF8-207ENST00000509995 ASH2LQ9UBL3 628 aa9.22□□□□□ -0.93
SNF8-207ENST00000509995 RNF11Q9Y3C5 154 aa9.22□□□□□ -0.93
SNF8-207ENST00000509995 ANGPTL3Q9Y5C1 460 aa9.22□□□□□ -0.93
SNF8-207ENST00000509995 DNAH7Q8WXX0 4024 aa9.21□□□□□ -0.93
SNF8-207ENST00000509995 SUPT3HB4E1H0 165 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms