RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 A0A0G2JMM0 328 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 A0A1W2PPB8 328 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 A0A1W2PRS3 328 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 CLDN24A6NM45 220 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 KIR3DP1A8MWS1 328 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 ZNF99A8MXY4 864 aaPredicted RBP7.33□□□□□ -1.24
SCN1A-207ENST00000507401 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.33□□□□□ -1.24
SCN1A-207ENST00000507401 NPIPA2E9PIF3 369 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 NPIPA3F8WFD2 350 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 G3V3Y1 287 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 DLGAP1O14490 977 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 SHOXO15266 292 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 ARHGEF9O43307 516 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 WDR1O75083 606 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 CCNKO75909 580 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 PRSS23O95084 383 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 YES1P07947 543 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 CT62P0C5K7 136 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 UBL4AP11441 157 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 PRF1P14222 555 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 GABRA1P14867 456 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 TSPAN8P19075 237 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 CD247P20963 164 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 NT5EP21589 574 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 DRD5P21918 477 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 CRHBPP24387 322 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 ACVR2AP27037 513 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 CHRNB4P30926 498 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 IFNA8P32881 189 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 RYKP34925 604 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 PPICP45877 212 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 MAN2A2P49641 1150 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 NR0B1P51843 470 aaKnown RBP7.33□□□□□ -1.24
SCN1A-207ENST00000507401 P2RX3P56373 397 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 PSPHP78330 225 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 TAGLNQ01995 201 aaKnown RBP7.33□□□□□ -1.24
SCN1A-207ENST00000507401 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.33□□□□□ -1.24
SCN1A-207ENST00000507401 SNTA1Q13424 505 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 HEPACAMQ14CZ8 416 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 RPS6KA2Q15349 733 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 CDSNQ15517 529 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 NEDD8Q15843 81 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 XP32Q5T750 250 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 XAF1Q6GPH4 301 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 HMBOX1Q6NT76 420 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 SHISA2Q6UWI4 295 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 C3P1Q6ZMU1 363 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 USP43Q70EL4 1123 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 GRAMD2AQ8IUY3 354 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 LURAP1LQ8IV03 231 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 SPARTQ8N0X7 666 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 C1orf52Q8N6N3 182 aaKnown RBP7.33□□□□□ -1.24
SCN1A-207ENST00000507401 OR10G3Q8NGC4 313 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 OR52E4Q8NGH9 312 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 SPPL2AQ8TCT8 520 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 DOK4Q8TEW6 326 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 RORBQ92753 470 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 PROX1Q92786 737 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 DIO2Q92813 273 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 CNRIP1Q96F85 164 aaPredicted RBP7.33□□□□□ -1.24
SCN1A-207ENST00000507401 METTL2AQ96IZ6 378 aaKnown RBP7.33□□□□□ -1.24
SCN1A-207ENST00000507401 LCORQ96JN0 433 aaPredicted RBP7.33□□□□□ -1.24
SCN1A-207ENST00000507401 TREX2Q9BQ50 279 aaPredicted RBP7.33□□□□□ -1.24
SCN1A-207ENST00000507401 LDAHQ9H6V9 325 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 SIAEQ9HAT2 523 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 MAT2BQ9NZL9 334 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 B4GALT7Q9UBV7 327 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 PRODH2Q9UF12 536 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 MAGEL2Q9UJ55 1249 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 ACAD8Q9UKU7 415 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 RNF6Q9Y252 685 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 ORC6Q9Y5N6 252 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 PHF3Q92576 2039 aaKnown RBP7.33□□□□□ -1.24
SCN1A-207ENST00000507401 ABCA12Q86UK0 2595 aa7.33□□□□□ -1.24
SCN1A-207ENST00000507401 DCHS2Q6V1P9 2916 aa7.32□□□□□ -1.24
SCN1A-207ENST00000507401 ATP6AP2A0A1C7CYW4 349 aa7.32□□□□□ -1.24
SCN1A-207ENST00000507401 A0A1W2PS29 197 aa7.32□□□□□ -1.24
SCN1A-207ENST00000507401 PRORSD1PA6NEY8 169 aa7.32□□□□□ -1.24
SCN1A-207ENST00000507401 AHRRA9YTQ3 701 aa7.32□□□□□ -1.24
SCN1A-207ENST00000507401 SDHDO14521 159 aa7.32□□□□□ -1.24
SCN1A-207ENST00000507401 TO15178 435 aa7.32□□□□□ -1.24
SCN1A-207ENST00000507401 PDPK1O15530 556 aa7.32□□□□□ -1.24
SCN1A-207ENST00000507401 ERAL1O75616 437 aaKnown RBP7.32□□□□□ -1.24
SCN1A-207ENST00000507401 TIPRLO75663 272 aa7.32□□□□□ -1.24
SCN1A-207ENST00000507401 PPM1BO75688 479 aa7.32□□□□□ -1.24
SCN1A-207ENST00000507401 ATP6AP2O75787 350 aa7.32□□□□□ -1.24
SCN1A-207ENST00000507401 SNAPC5O75971 98 aa7.32□□□□□ -1.24
SCN1A-207ENST00000507401 HPNP05981 417 aa7.32□□□□□ -1.24
SCN1A-207ENST00000507401 THRBP10828 461 aa7.32□□□□□ -1.24
SCN1A-207ENST00000507401 MATN1P21941 496 aa7.32□□□□□ -1.24
SCN1A-207ENST00000507401 GPX3P22352 226 aa7.32□□□□□ -1.24
SCN1A-207ENST00000507401 IL32P24001 234 aa7.32□□□□□ -1.24
SCN1A-207ENST00000507401 ELAVL4P26378 380 aaKnown RBP7.32□□□□□ -1.24
SCN1A-207ENST00000507401 ABCD3P28288 659 aa7.32□□□□□ -1.24
SCN1A-207ENST00000507401 SSTR2P30874 369 aa7.32□□□□□ -1.24
SCN1A-207ENST00000507401 MPIP34949 423 aa7.32□□□□□ -1.24
SCN1A-207ENST00000507401 SOX18P35713 384 aa7.32□□□□□ -1.24
SCN1A-207ENST00000507401 FEN1P39748 380 aaKnown RBP7.32□□□□□ -1.24
SCN1A-207ENST00000507401 CASP3P42574 277 aa7.32□□□□□ -1.24
SCN1A-207ENST00000507401 KIR3DL1P43629 444 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms