RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 NAGAP17050 411 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 DCKP27707 260 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 IL12BP29460 328 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 GSTT1P30711 240 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 SLC15A1P46059 708 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 SLC6A8P48029 635 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 TMBIM6P55061 237 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 NRG3P56975 720 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 RAB15P59190 212 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 RNF4P78317 190 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 EFR3AQ14156 821 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 NCF4Q15080 339 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 SNAPC1Q16533 368 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 TMEM44Q2T9K0 475 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 SYT6Q5T7P8 510 aaPredicted RBP7.39□□□□□ -1.23
COL4A5-208ENST00000505728 GTF2IRD2BQ6EKJ0 949 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 FAAH2Q6GMR7 532 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 WBP2NLQ6ICG8 309 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 PAPD4Q6PIY7 484 aaKnown RBP7.39□□□□□ -1.23
COL4A5-208ENST00000505728 HSDL2Q6YN16 418 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 WDR88Q6ZMY6 472 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 ZNF620Q6ZNG0 422 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 AHSA2Q719I0 299 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 GTF2IRD2Q86UP8 949 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 CYP4Z2PQ8N1L4 340 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 STX19Q8N4C7 294 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 TCEANCQ8N8B7 351 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 RNF217Q8TC41 542 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 BRIX1Q8TDN6 353 aaKnown RBP7.39□□□□□ -1.23
COL4A5-208ENST00000505728 FAR1Q8WVX9 515 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 SGCDQ92629 289 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 OMA1Q96E52 524 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 CRELD1Q96HD1 420 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 SLC38A2Q96QD8 506 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 LMF1Q96S06 567 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 ADOQ96SZ5 270 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 TSC22D3Q99576 134 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 SPSB2Q99619 263 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 DOK1Q99704 481 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 CDC6Q99741 560 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 CMKLR1Q99788 373 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 CTRCQ99895 268 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 BCL7BQ9BQE9 202 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 CRB3Q9BUF7 120 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 ZNF426Q9BUY5 554 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 STRADBQ9C0K7 418 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 DSN1Q9H410 356 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 EGLN3Q9H6Z9 239 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 C12orf10Q9HB07 376 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 RYDENQ9NUL5 291 aaKnown RBP7.39□□□□□ -1.23
COL4A5-208ENST00000505728 PTTG2Q9NZH5 202 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 CNIH4Q9P003 139 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 KLK13Q9UKR3 277 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 APC2O95996 2303 aa7.39□□□□□ -1.23
COL4A5-208ENST00000505728 AHCTF1Q8WYP5 2266 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 A0A087WUJ7 227 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 LOC102723996A0A087X1L8 192 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 IRGMA1A4Y4 181 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 OR6C70A6NIJ9 312 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 C9J4A7 227 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 AGRPO00253 132 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 TLX2O43763 284 aaPredicted RBP7.38□□□□□ -1.23
COL4A5-208ENST00000505728 HCN1O60741 890 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 NOL3O60936 208 aaKnown RBP7.38□□□□□ -1.23
COL4A5-208ENST00000505728 ADAM11O75078 769 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 CNOT3O75175 753 aaKnown RBP7.38□□□□□ -1.23
COL4A5-208ENST00000505728 ENTPD6O75354 484 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 ZFAND5O76080 213 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 IGHEP01854 428 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 PNMTP11086 282 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 BMP7P18075 431 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 MAKP20794 623 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 ACVR2AP27037 513 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 GRK5P34947 590 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 GPR4P46093 362 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 MASP1P48740 699 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 PLCXD2Q0VAA5 305 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 ST3GAL4Q11206 333 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 SKP2Q13309 424 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 IRF3Q14653 427 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 TBCEQ15813 527 aaPredicted RBP7.38□□□□□ -1.23
COL4A5-208ENST00000505728 ALG10BQ5I7T1 473 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 UBE2UQ5VVX9 321 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 RNLSQ5VYX0 342 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 LCN10Q6JVE6 187 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 SHISA6Q6ZSJ9 500 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 SLCO6A1Q86UG4 719 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 MISPQ8IVT2 679 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 NAXDQ8IW45 347 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 CADM2Q8N3J6 435 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 APCDD1LQ8NCL9 501 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 OR52L1Q8NGH7 329 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 OR8D4Q8NGM9 314 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 TMEM163Q8TC26 289 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 PHOSPHO1Q8TCT1 267 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 FGF11Q92914 225 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 MR1Q95460 341 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 NMD3Q96D46 503 aaKnown RBP7.38□□□□□ -1.23
COL4A5-208ENST00000505728 BPIFA2Q96DR5 249 aa7.38□□□□□ -1.23
COL4A5-208ENST00000505728 SGTBQ96EQ0 304 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms