RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 MYNNQ9NPC7 610 aa3.16□□□□□ -1.9
USP46-205ENST00000504078 FANCFQ9NPI8 374 aa3.16□□□□□ -1.9
USP46-205ENST00000504078 DDX18Q9NVP1 670 aaKnown RBP3.16□□□□□ -1.9
USP46-205ENST00000504078 HIF1ANQ9NWT6 349 aa3.16□□□□□ -1.9
USP46-205ENST00000504078 FAM120CQ9NX05 1096 aaKnown RBP3.16□□□□□ -1.9
USP46-205ENST00000504078 WHRNQ9P202 907 aa3.16□□□□□ -1.9
USP46-205ENST00000504078 ING1Q9UK53 422 aaPredicted RBP3.16□□□□□ -1.9
USP46-205ENST00000504078 ICAM5Q9UMF0 924 aa3.16□□□□□ -1.9
USP46-205ENST00000504078 PCDHB10Q9UN67 800 aa3.16□□□□□ -1.9
USP46-205ENST00000504078 CFL2Q9Y281 166 aa3.16□□□□□ -1.9
USP46-205ENST00000504078 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.16□□□□□ -1.9
USP46-205ENST00000504078 SNX8Q9Y5X2 465 aa3.16□□□□□ -1.9
USP46-205ENST00000504078 SLC25A15Q9Y619 301 aa3.16□□□□□ -1.9
USP46-205ENST00000504078 ZNF780BQ9Y6R6 833 aa3.16□□□□□ -1.9
USP46-205ENST00000504078 TENM1Q9UKZ4 2725 aa3.16□□□□□ -1.9
USP46-205ENST00000504078 LOC390937A0A1W2PQ73 354 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 TMEM82A0PJX8 343 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 C1orf226A1L170 272 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 DNAJC9-AS1A6NH13 148 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 OR5H1A6NKK0 313 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 H0YIV9 168 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 TRIM77I1YAP6 450 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 PGRMC1O00264 195 aaKnown RBP3.15□□□□□ -1.91
USP46-205ENST00000504078 PPP6CO00743 305 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 KLF11O14901 512 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 EFNA2O43921 213 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 PCDH7O60245 1069 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 COQ9O75208 318 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 SEMA3DO95025 777 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 STAMBPO95630 424 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 PDYNP01213 254 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 ACP2P11117 423 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 MTHFD2P13995 350 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 DAOP14920 347 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 IFNGR1P15260 489 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 STMN1P16949 149 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 PRKCAP17252 672 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 DDX5P17844 614 aaKnown RBP3.15□□□□□ -1.91
USP46-205ENST00000504078 TCN1P20061 433 aaPredicted RBP3.15□□□□□ -1.91
USP46-205ENST00000504078 PGCP20142 388 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 OMGP23515 440 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 PSMA4P25789 261 aaKnown RBP3.15□□□□□ -1.91
USP46-205ENST00000504078 PTX3P26022 381 aaPredicted RBP3.15□□□□□ -1.91
USP46-205ENST00000504078 SLC7A1P30825 629 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 SSTR1P30872 391 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 GABRA3P34903 492 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 OR3A2P47893 321 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 COMPP49747 757 aaPredicted RBP3.15□□□□□ -1.91
USP46-205ENST00000504078 NCBP2P52298 156 aaKnown RBP eCLIP3.15□□□□□ -1.91
USP46-205ENST00000504078 PNLIPRP2P54317 469 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 PRKAG1P54619 331 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 CARD18P57730 90 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 HILS1P60008 231 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 RAB10P61026 200 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 UBA52P62987 128 aaKnown RBP3.15□□□□□ -1.91
USP46-205ENST00000504078 MRPS22P82650 360 aaKnown RBP3.15□□□□□ -1.91
USP46-205ENST00000504078 ZNF117Q03924 483 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 CHRNB3Q05901 458 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 BTKQ06187 659 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 RASGEF1BQ0VAM2 473 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 IFT88Q13099 833 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 CUL3Q13618 768 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 E2F2Q14209 437 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 ZKSCAN8Q15776 578 aaPredicted RBP3.15□□□□□ -1.91
USP46-205ENST00000504078 DECR1Q16698 335 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 MST1LQ2TV78 715 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 ALKBH6Q3KRA9 238 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 TMEM176BQ3YBM2 270 aaPredicted RBP3.15□□□□□ -1.91
USP46-205ENST00000504078 ATP6AP1LQ52LC2 224 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 HIKESHIQ53FT3 197 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 TIMM23BQ5SRD1 257 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 AVPI1Q5T686 147 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 FRG2Q64ET8 278 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 Q6ZT83 130 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 ESPNLQ6ZVH7 1005 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 OLIG3Q7RTU3 272 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 HMGN2P46Q86SG4 172 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 TBC1D1Q86TI0 1168 aaPredicted RBP3.15□□□□□ -1.91
USP46-205ENST00000504078 CTAGE3PQ8IX95 158 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 KLHL7Q8IXQ5 586 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 ZBED8Q8IZ13 594 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 CDK20Q8IZL9 346 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 CENPLQ8N0S6 344 aaPredicted RBP3.15□□□□□ -1.91
USP46-205ENST00000504078 METTL4Q8N3J2 472 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 GTPBP8Q8N3Z3 284 aaPredicted RBP3.15□□□□□ -1.91
USP46-205ENST00000504078 ZNF433Q8N7K0 673 aaPredicted RBP3.15□□□□□ -1.91
USP46-205ENST00000504078 ZDHHC22Q8N966 263 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 NOA1Q8NC60 698 aaKnown RBP3.15□□□□□ -1.91
USP46-205ENST00000504078 NUP43Q8NFH3 380 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 OR4F6Q8NGB9 312 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 CLDND2Q8NHS1 167 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 FBXO27Q8NI29 283 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.15□□□□□ -1.91
USP46-205ENST00000504078 FAM110BQ8TC76 370 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 ZNF675Q8TD23 568 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 GPR151Q8TDV0 419 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 FAM216AQ8WUB2 273 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 SELENOMQ8WWX9 145 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 JADE3Q92613 823 aa3.15□□□□□ -1.91
USP46-205ENST00000504078 ATP6V1E2Q96A05 226 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms