RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 SCARB2Q14108 478 aa16.39■□□□□ 0.21
PDLIM7-209ENST00000503346 CAPRIN1Q14444 709 aaKnown RBP16.39■□□□□ 0.21
PDLIM7-209ENST00000503346 SLC25A35Q3KQZ1 300 aa16.39■□□□□ 0.21
PDLIM7-209ENST00000503346 POMZP3Q6PJE2 187 aa16.39■□□□□ 0.21
PDLIM7-209ENST00000503346 PLXDC2Q6UX71 529 aa16.39■□□□□ 0.21
PDLIM7-209ENST00000503346 NET1Q7Z628 596 aaPredicted RBP16.39■□□□□ 0.21
PDLIM7-209ENST00000503346 MTDHQ86UE4 582 aaKnown RBP16.39■□□□□ 0.21
PDLIM7-209ENST00000503346 PTOV1Q86YD1 416 aa16.39■□□□□ 0.21
PDLIM7-209ENST00000503346 ZNF440Q8IYI8 595 aa16.39■□□□□ 0.21
PDLIM7-209ENST00000503346 PCYOX1LQ8NBM8 494 aa16.39■□□□□ 0.21
PDLIM7-209ENST00000503346 OR2V1Q8NHB1 315 aa16.39■□□□□ 0.21
PDLIM7-209ENST00000503346 RP9Q8TA86 221 aaKnown RBP16.39■□□□□ 0.21
PDLIM7-209ENST00000503346 ZNF845Q96IR2 970 aaPredicted RBP16.39■□□□□ 0.21
PDLIM7-209ENST00000503346 KLHL15Q96M94 604 aa16.39■□□□□ 0.21
PDLIM7-209ENST00000503346 SPATA9Q9BWV2 254 aa16.39■□□□□ 0.21
PDLIM7-209ENST00000503346 PINK1Q9BXM7 581 aa16.39■□□□□ 0.21
PDLIM7-209ENST00000503346 TRIM8Q9BZR9 551 aa16.39■□□□□ 0.21
PDLIM7-209ENST00000503346 UCK2Q9BZX2 261 aa16.39■□□□□ 0.21
PDLIM7-209ENST00000503346 TMEM185BQ9H7F4 350 aa16.39■□□□□ 0.21
PDLIM7-209ENST00000503346 RLIMQ9NVW2 624 aa16.39■□□□□ 0.21
PDLIM7-209ENST00000503346 PRDM4Q9UKN5 801 aa16.39■□□□□ 0.21
PDLIM7-209ENST00000503346 CHST2Q9Y4C5 530 aa16.39■□□□□ 0.21
PDLIM7-209ENST00000503346 PHF3Q92576 2039 aaKnown RBP16.39■□□□□ 0.21
PDLIM7-209ENST00000503346 PCNX3Q9H6A9 2034 aa16.39■□□□□ 0.21
PDLIM7-209ENST00000503346 A0A0J9YW62 118 aa16.38■□□□□ 0.21
PDLIM7-209ENST00000503346 CFAP73A6NFT4 308 aa16.38■□□□□ 0.21
PDLIM7-209ENST00000503346 SLC22A20A6NK97 555 aa16.38■□□□□ 0.21
PDLIM7-209ENST00000503346 GJE1A6NN92 205 aa16.38■□□□□ 0.21
PDLIM7-209ENST00000503346 FAM90A27PA6NNH2 459 aa16.38■□□□□ 0.21
PDLIM7-209ENST00000503346 IL18BPO95998 194 aa16.38■□□□□ 0.21
PDLIM7-209ENST00000503346 TMIGD3P0DMS9 266 aaPredicted RBP16.38■□□□□ 0.21
PDLIM7-209ENST00000503346 SLC6A2P23975 617 aa16.38■□□□□ 0.21
PDLIM7-209ENST00000503346 CTSSP25774 331 aa16.38■□□□□ 0.21
PDLIM7-209ENST00000503346 COL8A1P27658 744 aa16.38■□□□□ 0.21
PDLIM7-209ENST00000503346 RYKP34925 604 aa16.38■□□□□ 0.21
PDLIM7-209ENST00000503346 EIF1AXP47813 144 aaKnown RBP16.38■□□□□ 0.21
PDLIM7-209ENST00000503346 TFF3Q07654 80 aa16.38■□□□□ 0.21
PDLIM7-209ENST00000503346 EPS8Q12929 822 aa16.38■□□□□ 0.21
PDLIM7-209ENST00000503346 ZNF311Q5JNZ3 666 aa16.38■□□□□ 0.21
PDLIM7-209ENST00000503346 HIST2H2BCQ6DN03 193 aa16.38■□□□□ 0.21
PDLIM7-209ENST00000503346 NANOGP8Q6NSW7 305 aa16.38■□□□□ 0.21
PDLIM7-209ENST00000503346 PLEKHM3Q6ZWE6 761 aa16.38■□□□□ 0.21
PDLIM7-209ENST00000503346 GRINAQ7Z429 371 aa16.38■□□□□ 0.21
PDLIM7-209ENST00000503346 SERPINA11Q86U17 422 aa16.38■□□□□ 0.21
PDLIM7-209ENST00000503346 C11orf65Q8NCR3 313 aa16.38■□□□□ 0.21
PDLIM7-209ENST00000503346 HIPK4Q8NE63 616 aa16.38■□□□□ 0.21
PDLIM7-209ENST00000503346 OR8J3Q8NGG0 315 aa16.38■□□□□ 0.21
PDLIM7-209ENST00000503346 OR10D3Q8NH80 312 aa16.38■□□□□ 0.21
PDLIM7-209ENST00000503346 ZNF563Q8TA94 476 aa16.38■□□□□ 0.21
PDLIM7-209ENST00000503346 FIG4Q92562 907 aa16.38■□□□□ 0.21
PDLIM7-209ENST00000503346 SH3GL1Q99961 368 aa16.38■□□□□ 0.21
PDLIM7-209ENST00000503346 SLC39A3Q9BRY0 314 aa16.38■□□□□ 0.21
PDLIM7-209ENST00000503346 MYLK2Q9H1R3 596 aa16.38■□□□□ 0.21
PDLIM7-209ENST00000503346 ARMC7Q9H6L4 198 aa16.38■□□□□ 0.21
PDLIM7-209ENST00000503346 NANOGQ9H9S0 305 aa16.38■□□□□ 0.21
PDLIM7-209ENST00000503346 KCNJ16Q9NPI9 418 aa16.38■□□□□ 0.21
PDLIM7-209ENST00000503346 GID8Q9NWU2 228 aa16.38■□□□□ 0.21
PDLIM7-209ENST00000503346 FAM53CQ9NYF3 392 aa16.38■□□□□ 0.21
PDLIM7-209ENST00000503346 UTP20O75691 2785 aaKnown RBP16.37■□□□□ 0.21
PDLIM7-209ENST00000503346 AP3D1O14617 1153 aa16.37■□□□□ 0.21
PDLIM7-209ENST00000503346 DVL2O14641 736 aa16.37■□□□□ 0.21
PDLIM7-209ENST00000503346 TNFSF11O14788 317 aa16.37■□□□□ 0.21
PDLIM7-209ENST00000503346 OPN1LWP04000 364 aa16.37■□□□□ 0.21
PDLIM7-209ENST00000503346 SHC1P29353 583 aa16.37■□□□□ 0.21
PDLIM7-209ENST00000503346 PRKAR1BP31321 381 aa16.37■□□□□ 0.21
PDLIM7-209ENST00000503346 APOBEC1P41238 236 aaKnown RBP16.37■□□□□ 0.21
PDLIM7-209ENST00000503346 IDH2P48735 452 aaKnown RBP16.37■□□□□ 0.21
PDLIM7-209ENST00000503346 MERTKQ12866 999 aa16.37■□□□□ 0.21
PDLIM7-209ENST00000503346 PON3Q15166 354 aa16.37■□□□□ 0.21
PDLIM7-209ENST00000503346 SGCBQ16585 318 aa16.37■□□□□ 0.21
PDLIM7-209ENST00000503346 CYP51A1Q16850 503 aa16.37■□□□□ 0.21
PDLIM7-209ENST00000503346 PDSS1Q5T2R2 415 aa16.37■□□□□ 0.21
PDLIM7-209ENST00000503346 SP5Q6BEB4 398 aaPredicted RBP16.37■□□□□ 0.21
PDLIM7-209ENST00000503346 OR2A2Q6IF42 318 aa16.37■□□□□ 0.21
PDLIM7-209ENST00000503346 C3orf33Q6P1S2 294 aa16.37■□□□□ 0.21
PDLIM7-209ENST00000503346 P4HA3Q7Z4N8 544 aa16.37■□□□□ 0.21
PDLIM7-209ENST00000503346 KRT73Q86Y46 540 aa16.37■□□□□ 0.21
PDLIM7-209ENST00000503346 CLIP4Q8N3C7 705 aa16.37■□□□□ 0.21
PDLIM7-209ENST00000503346 SLC35B4Q969S0 331 aa16.37■□□□□ 0.21
PDLIM7-209ENST00000503346 SPATA5L1Q9BVQ7 753 aa16.37■□□□□ 0.21
PDLIM7-209ENST00000503346 SFXN3Q9BWM7 321 aa16.37■□□□□ 0.21
PDLIM7-209ENST00000503346 SERINC1Q9NRX5 453 aa16.37■□□□□ 0.21
PDLIM7-209ENST00000503346 ANGPT4Q9Y264 503 aa16.37■□□□□ 0.21
PDLIM7-209ENST00000503346 PCNX1Q96RV3 2341 aa16.37■□□□□ 0.21
PDLIM7-209ENST00000503346 NKX2-6A6NCS4 301 aa16.36■□□□□ 0.21
PDLIM7-209ENST00000503346 C19orf84I3L1E1 186 aa16.36■□□□□ 0.21
PDLIM7-209ENST00000503346 CXCL13O43927 109 aa16.36■□□□□ 0.21
PDLIM7-209ENST00000503346 CRHP06850 196 aa16.36■□□□□ 0.21
PDLIM7-209ENST00000503346 COX4I1P13073 169 aa16.36■□□□□ 0.21
PDLIM7-209ENST00000503346 UQCRBP14927 111 aa16.36■□□□□ 0.21
PDLIM7-209ENST00000503346 BMP5P22003 454 aa16.36■□□□□ 0.21
PDLIM7-209ENST00000503346 SFTPDP35247 375 aa16.36■□□□□ 0.21
PDLIM7-209ENST00000503346 OPRM1P35372 400 aa16.36■□□□□ 0.21
PDLIM7-209ENST00000503346 ACAA2P42765 397 aaKnown RBP16.36■□□□□ 0.21
PDLIM7-209ENST00000503346 GZMMP51124 257 aa16.36■□□□□ 0.21
PDLIM7-209ENST00000503346 PCBP3P57721 371 aaKnown RBP16.36■□□□□ 0.21
PDLIM7-209ENST00000503346 FOXF2Q12947 444 aa16.36■□□□□ 0.21
PDLIM7-209ENST00000503346 TMEM176BQ3YBM2 270 aaPredicted RBP16.36■□□□□ 0.21
PDLIM7-209ENST00000503346 EEF1A1P5Q5VTE0 462 aa16.36■□□□□ 0.21
PDLIM7-209ENST00000503346 HBMQ6B0K9 141 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms