RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 G3V2L1 256 aa14.43□□□□□ -0.1
VIM-208ENST00000497849 TYROBPO43914 113 aa14.43□□□□□ -0.1
VIM-208ENST00000497849 CYTIPO60759 359 aa14.43□□□□□ -0.1
VIM-208ENST00000497849 SMIM24O75264 130 aa14.43□□□□□ -0.1
VIM-208ENST00000497849 NKX2-2O95096 273 aa14.43□□□□□ -0.1
VIM-208ENST00000497849 RAC3P60763 192 aa14.43□□□□□ -0.1
VIM-208ENST00000497849 RASGEF1BQ0VAM2 473 aa14.43□□□□□ -0.1
VIM-208ENST00000497849 ZSWIM7Q19AV6 140 aa14.43□□□□□ -0.1
VIM-208ENST00000497849 GALNT18Q6P9A2 607 aa14.43□□□□□ -0.1
VIM-208ENST00000497849 CNPY4Q8N129 248 aa14.43□□□□□ -0.1
VIM-208ENST00000497849 CCDC63Q8NA47 563 aa14.43□□□□□ -0.1
VIM-208ENST00000497849 FBXO17Q96EF6 278 aa14.43□□□□□ -0.1
VIM-208ENST00000497849 AMDHD1Q96NU7 426 aa14.43□□□□□ -0.1
VIM-208ENST00000497849 TRMOQ9BU70 441 aa14.43□□□□□ -0.1
VIM-208ENST00000497849 C1QTNF6Q9BXI9 259 aa14.43□□□□□ -0.1
VIM-208ENST00000497849 EQTNQ9NQ60 294 aa14.43□□□□□ -0.1
VIM-208ENST00000497849 TAS2R7Q9NYW3 318 aa14.43□□□□□ -0.1
VIM-208ENST00000497849 NTMQ9P121 344 aa14.43□□□□□ -0.1
VIM-208ENST00000497849 METRNQ9UJH8 293 aa14.43□□□□□ -0.1
VIM-208ENST00000497849 A0A1W2PNR3 127 aa14.42□□□□□ -0.1
VIM-208ENST00000497849 TTC36A6NLP5 189 aa14.42□□□□□ -0.1
VIM-208ENST00000497849 ZNF724A8MTY0 619 aa14.42□□□□□ -0.1
VIM-208ENST00000497849 OIP5O43482 229 aa14.42□□□□□ -0.1
VIM-208ENST00000497849 IGHV3-9P01782 118 aa14.42□□□□□ -0.1
VIM-208ENST00000497849 ACTG1P63261 375 aa14.42□□□□□ -0.1
VIM-208ENST00000497849 PHC1P78364 1004 aa14.42□□□□□ -0.1
VIM-208ENST00000497849 ZNF117Q03924 483 aa14.42□□□□□ -0.1
VIM-208ENST00000497849 ACSM2AQ08AH3 577 aa14.42□□□□□ -0.1
VIM-208ENST00000497849 C2orf80Q0P641 193 aa14.42□□□□□ -0.1
VIM-208ENST00000497849 SPIN4Q56A73 249 aa14.42□□□□□ -0.1
VIM-208ENST00000497849 FBXW9Q5XUX1 488 aa14.42□□□□□ -0.1
VIM-208ENST00000497849 ACSM2BQ68CK6 577 aa14.42□□□□□ -0.1
VIM-208ENST00000497849 LCA5Q86VQ0 697 aa14.42□□□□□ -0.1
VIM-208ENST00000497849 MISPQ8IVT2 679 aa14.42□□□□□ -0.1
VIM-208ENST00000497849 ZNF100Q8IYN0 542 aa14.42□□□□□ -0.1
VIM-208ENST00000497849 ANKS4BQ8N8V4 417 aa14.42□□□□□ -0.1
VIM-208ENST00000497849 ATP6V1C2Q8NEY4 427 aa14.42□□□□□ -0.1
VIM-208ENST00000497849 ZNF524Q96C55 264 aa14.42□□□□□ -0.1
VIM-208ENST00000497849 MYOZ1Q9NP98 299 aaPredicted RBP14.42□□□□□ -0.1
VIM-208ENST00000497849 MKS1Q9NXB0 559 aa14.42□□□□□ -0.1
VIM-208ENST00000497849 TMCO1Q9UM00 188 aa14.42□□□□□ -0.1
VIM-208ENST00000497849 TRAF6Q9Y4K3 522 aa14.42□□□□□ -0.1
VIM-208ENST00000497849 A0A1W2PQD3 144 aa14.41□□□□□ -0.1
VIM-208ENST00000497849 CIB4A0PJX0 185 aa14.41□□□□□ -0.1
VIM-208ENST00000497849 KCNK2O95069 426 aa14.41□□□□□ -0.1
VIM-208ENST00000497849 ANXA4P09525 319 aaPredicted RBP14.41□□□□□ -0.1
VIM-208ENST00000497849 MYL2P10916 166 aa14.41□□□□□ -0.1
VIM-208ENST00000497849 CPA3P15088 417 aa14.41□□□□□ -0.1
VIM-208ENST00000497849 TAC1P20366 129 aa14.41□□□□□ -0.1
VIM-208ENST00000497849 ATP5F1P24539 256 aaPredicted RBP14.41□□□□□ -0.1
VIM-208ENST00000497849 HTR6P50406 440 aa14.41□□□□□ -0.1
VIM-208ENST00000497849 FOXG1P55316 489 aaPredicted RBP14.41□□□□□ -0.1
VIM-208ENST00000497849 TOMM34Q15785 309 aaPredicted RBP14.41□□□□□ -0.1
VIM-208ENST00000497849 UNC50Q53HI1 259 aa14.41□□□□□ -0.1
VIM-208ENST00000497849 PRR31Q5SQ13 230 aa14.41□□□□□ -0.1
VIM-208ENST00000497849 CBLN3Q6UW01 205 aa14.41□□□□□ -0.1
VIM-208ENST00000497849 ZYG11AQ6WRX3 759 aa14.41□□□□□ -0.1
VIM-208ENST00000497849 GALNT5Q7Z7M9 940 aa14.41□□□□□ -0.1
VIM-208ENST00000497849 ANKRD42Q8N9B4 389 aa14.41□□□□□ -0.1
VIM-208ENST00000497849 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.41□□□□□ -0.1
VIM-208ENST00000497849 MUS81Q96NY9 551 aa14.41□□□□□ -0.1
VIM-208ENST00000497849 C1QTNF3Q9BXJ4 246 aa14.41□□□□□ -0.1
VIM-208ENST00000497849 IQCGQ9H095 443 aaKnown RBP14.41□□□□□ -0.1
VIM-208ENST00000497849 UBQLN4Q9NRR5 601 aa14.41□□□□□ -0.1
VIM-208ENST00000497849 WDR91A4D1P6 747 aa14.4□□□□□ -0.1
VIM-208ENST00000497849 ATP6V1G2-DDX39BF2Z307 99 aa14.4□□□□□ -0.1
VIM-208ENST00000497849 LILRA1O75019 489 aa14.4□□□□□ -0.1
VIM-208ENST00000497849 KRT6AP02538 564 aa14.4□□□□□ -0.1
VIM-208ENST00000497849 KRT6BP04259 564 aa14.4□□□□□ -0.1
VIM-208ENST00000497849 IFI6P09912 130 aa14.4□□□□□ -0.1
VIM-208ENST00000497849 ACP2P11117 423 aa14.4□□□□□ -0.1
VIM-208ENST00000497849 PRPS2P11908 318 aa14.4□□□□□ -0.1
VIM-208ENST00000497849 ALDH3A1P30838 453 aa14.4□□□□□ -0.1
VIM-208ENST00000497849 KRT6CP48668 564 aa14.4□□□□□ -0.1
VIM-208ENST00000497849 GABRA6Q16445 453 aa14.4□□□□□ -0.1
VIM-208ENST00000497849 CCDC153Q494R4 210 aa14.4□□□□□ -0.1
VIM-208ENST00000497849 FAM71E1Q6IPT2 247 aa14.4□□□□□ -0.1
VIM-208ENST00000497849 DEF8Q6ZN54 512 aa14.4□□□□□ -0.1
VIM-208ENST00000497849 RINLQ6ZS11 566 aa14.4□□□□□ -0.1
VIM-208ENST00000497849 C10orf107Q8IVU9 208 aa14.4□□□□□ -0.1
VIM-208ENST00000497849 LINC01356Q8N9X3 169 aa14.4□□□□□ -0.1
VIM-208ENST00000497849 WDR31Q8NA23 367 aa14.4□□□□□ -0.1
VIM-208ENST00000497849 ZNF540Q8NDQ6 660 aa14.4□□□□□ -0.1
VIM-208ENST00000497849 CDC26Q8NHZ8 85 aa14.4□□□□□ -0.1
VIM-208ENST00000497849 FBXO30Q8TB52 745 aa14.4□□□□□ -0.1
VIM-208ENST00000497849 GCDHQ92947 438 aaPredicted RBP14.4□□□□□ -0.1
VIM-208ENST00000497849 MECRQ9BV79 373 aa14.4□□□□□ -0.1
VIM-208ENST00000497849 FKRPQ9H9S5 495 aa14.4□□□□□ -0.1
VIM-208ENST00000497849 SIRT5Q9NXA8 310 aa14.4□□□□□ -0.1
VIM-208ENST00000497849 ICAM5Q9UMF0 924 aa14.4□□□□□ -0.1
VIM-208ENST00000497849 PRKDCP78527 4128 aaKnown RBP14.39□□□□□ -0.11
VIM-208ENST00000497849 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.39□□□□□ -0.11
VIM-208ENST00000497849 NPIPA5A0A0B4J1W7 369 aa14.39□□□□□ -0.11
VIM-208ENST00000497849 CCT8L1PA6NM43 557 aa14.39□□□□□ -0.11
VIM-208ENST00000497849 FAM157AC9JC47 383 aa14.39□□□□□ -0.11
VIM-208ENST00000497849 NPIPA7E9PJI5 369 aa14.39□□□□□ -0.11
VIM-208ENST00000497849 SCDO00767 359 aa14.39□□□□□ -0.11
VIM-208ENST00000497849 ULK1O75385 1050 aa14.39□□□□□ -0.11
VIM-208ENST00000497849 TACSTD2P09758 323 aa14.39□□□□□ -0.11
VIM-208ENST00000497849 NPIPA8P0DM63 369 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms