RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 GRAMD2AQ8IUY3 354 aa11.9□□□□□ -0.5
ERCC3-209ENST00000494464 MEIOBQ8N635 442 aa11.9□□□□□ -0.5
ERCC3-209ENST00000494464 ADAMTS15Q8TE58 950 aa11.9□□□□□ -0.5
ERCC3-209ENST00000494464 GMPR2Q9P2T1 348 aaKnown RBP11.9□□□□□ -0.5
ERCC3-209ENST00000494464 BTNL2Q9UIR0 455 aa11.9□□□□□ -0.5
ERCC3-209ENST00000494464 AP4S1Q9Y587 144 aa11.9□□□□□ -0.5
ERCC3-209ENST00000494464 GMEB1Q9Y692 573 aa11.9□□□□□ -0.5
ERCC3-209ENST00000494464 MED12LQ86YW9 2145 aa11.89□□□□□ -0.51
ERCC3-209ENST00000494464 TCRBV5S2A0A599 114 aa11.89□□□□□ -0.51
ERCC3-209ENST00000494464 H3BML4 177 aa11.89□□□□□ -0.51
ERCC3-209ENST00000494464 SCN2BO60939 215 aa11.89□□□□□ -0.51
ERCC3-209ENST00000494464 CRHP06850 196 aa11.89□□□□□ -0.51
ERCC3-209ENST00000494464 UMPSP11172 480 aa11.89□□□□□ -0.51
ERCC3-209ENST00000494464 HPGDP15428 266 aa11.89□□□□□ -0.51
ERCC3-209ENST00000494464 GGT1P19440 569 aa11.89□□□□□ -0.51
ERCC3-209ENST00000494464 UQCRC1P31930 480 aa11.89□□□□□ -0.51
ERCC3-209ENST00000494464 SOAT1P35610 550 aa11.89□□□□□ -0.51
ERCC3-209ENST00000494464 CLDN15P56746 228 aa11.89□□□□□ -0.51
ERCC3-209ENST00000494464 KRTAP10-9P60411 292 aa11.89□□□□□ -0.51
ERCC3-209ENST00000494464 SORDQ00796 357 aa11.89□□□□□ -0.51
ERCC3-209ENST00000494464 TRIP10Q15642 601 aa11.89□□□□□ -0.51
ERCC3-209ENST00000494464 ANXA8L1Q5VT79 327 aa11.89□□□□□ -0.51
ERCC3-209ENST00000494464 CYP2R1Q6VVX0 501 aa11.89□□□□□ -0.51
ERCC3-209ENST00000494464 CLECL1Q8IZS7 167 aa11.89□□□□□ -0.51
ERCC3-209ENST00000494464 METTL25Q8N6Q8 603 aa11.89□□□□□ -0.51
ERCC3-209ENST00000494464 ZNF527Q8NB42 609 aa11.89□□□□□ -0.51
ERCC3-209ENST00000494464 OR52E4Q8NGH9 312 aa11.89□□□□□ -0.51
ERCC3-209ENST00000494464 OR5AK3PQ8NH89 298 aa11.89□□□□□ -0.51
ERCC3-209ENST00000494464 POP5Q969H6 163 aaKnown RBP11.89□□□□□ -0.51
ERCC3-209ENST00000494464 SLCO4A1Q96BD0 722 aa11.89□□□□□ -0.51
ERCC3-209ENST00000494464 ZBTB8AQ96BR9 441 aa11.89□□□□□ -0.51
ERCC3-209ENST00000494464 KLHL4Q9C0H6 718 aa11.89□□□□□ -0.51
ERCC3-209ENST00000494464 HOXD1Q9GZZ0 328 aa11.89□□□□□ -0.51
ERCC3-209ENST00000494464 CCM2LQ9NUG4 571 aaPredicted RBP11.89□□□□□ -0.51
ERCC3-209ENST00000494464 EGFL7Q9UHF1 273 aa11.89□□□□□ -0.51
ERCC3-209ENST00000494464 ZNF337Q9Y3M9 751 aa11.89□□□□□ -0.51
ERCC3-209ENST00000494464 ZNF175Q9Y473 711 aa11.89□□□□□ -0.51
ERCC3-209ENST00000494464 AP4B1Q9Y6B7 739 aa11.89□□□□□ -0.51
ERCC3-209ENST00000494464 CREBBPQ92793 2442 aa11.89□□□□□ -0.51
ERCC3-209ENST00000494464 OTOGQ6ZRI0 2925 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 NUP214P35658 2090 aaPredicted RBP11.88□□□□□ -0.51
ERCC3-209ENST00000494464 TACC2O95359 2948 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 ANKHD1Q8IWZ3 2542 aaKnown RBP11.88□□□□□ -0.51
ERCC3-209ENST00000494464 RNF103-CHMP3A0A140T963 221 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 DHRS12A0PJE2 317 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 EEF1E1-BLOC1S5C9J1V9 151 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 NPIPB9F8W1W9 429 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 RFXANKO14593 260 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 EEF1E1O43324 174 aaKnown RBP11.88□□□□□ -0.51
ERCC3-209ENST00000494464 TNFRSF21O75509 655 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 TGM6O95932 706 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 AK1P00568 194 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 ZCCHC18P0CG32 403 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 PSMA4P25789 261 aaKnown RBP11.88□□□□□ -0.51
ERCC3-209ENST00000494464 PEX2P28328 305 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 FOXF2Q12947 444 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 CD226Q15762 336 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 PLPPR5Q32ZL2 321 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 FLYWCH1Q4VC44 716 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 OR2A2Q6IF42 318 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 IZUMO2Q6UXV1 221 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 DNAJC14Q6Y2X3 702 aaPredicted RBP11.88□□□□□ -0.51
ERCC3-209ENST00000494464 CHMP1BQ7LBR1 199 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 CALHM3Q86XJ0 350 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 UBQLNLQ8IYU4 475 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 ADGRG5Q8IZF4 528 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 LILRA2Q8N149 483 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 GTPBP8Q8N3Z3 284 aaPredicted RBP11.88□□□□□ -0.51
ERCC3-209ENST00000494464 GATSQ8NAP1 163 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 CHDHQ8NE62 594 aaPredicted RBP11.88□□□□□ -0.51
ERCC3-209ENST00000494464 VPS37AQ8NEZ2 397 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 OR2T12Q8NG77 320 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 MIPOL1Q8TD10 442 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 ZNF583Q96ND8 569 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 ZNF570Q96NI8 536 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 OR7D2Q96RA2 312 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 PKP2Q99959 881 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 ECSITQ9BQ95 431 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 PIGMQ9H3S5 423 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 SERHL2Q9H4I8 314 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 KAT8Q9H7Z6 458 aaKnown RBP11.88□□□□□ -0.51
ERCC3-209ENST00000494464 PCDHGB4Q9UN71 923 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 VDAC3Q9Y277 283 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 LRCH1Q9Y2L9 728 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 PCDHB14Q9Y5E9 798 aa11.88□□□□□ -0.51
ERCC3-209ENST00000494464 AKAP9Q99996 3911 aa11.87□□□□□ -0.51
ERCC3-209ENST00000494464 SLC22A20A6NK97 555 aa11.87□□□□□ -0.51
ERCC3-209ENST00000494464 DUXAA6NLW8 204 aa11.87□□□□□ -0.51
ERCC3-209ENST00000494464 SEC14L5O43304 696 aa11.87□□□□□ -0.51
ERCC3-209ENST00000494464 FCGR1AP12314 374 aa11.87□□□□□ -0.51
ERCC3-209ENST00000494464 KIR2DL3P43628 341 aa11.87□□□□□ -0.51
ERCC3-209ENST00000494464 ZNF41P51814 821 aaPredicted RBP11.87□□□□□ -0.51
ERCC3-209ENST00000494464 SUCLG1P53597 346 aaKnown RBP11.87□□□□□ -0.51
ERCC3-209ENST00000494464 ATP12AP54707 1039 aa11.87□□□□□ -0.51
ERCC3-209ENST00000494464 SUMO3P55854 103 aaPredicted RBP11.87□□□□□ -0.51
ERCC3-209ENST00000494464 CLDN20P56880 219 aa11.87□□□□□ -0.51
ERCC3-209ENST00000494464 RPS3AP61247 264 aaKnown RBP11.87□□□□□ -0.51
ERCC3-209ENST00000494464 GTDC1Q4AE62 458 aa11.87□□□□□ -0.51
ERCC3-209ENST00000494464 KLHL26Q53HC5 615 aa11.87□□□□□ -0.51
ERCC3-209ENST00000494464 PLXDC2Q6UX71 529 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms