RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 RAB43Q86YS6 212 aa12.74□□□□□ -0.37
VCP-207ENST00000493886 POGLUT1Q8NBL1 392 aa12.74□□□□□ -0.37
VCP-207ENST00000493886 CADM4Q8NFZ8 388 aa12.74□□□□□ -0.37
VCP-207ENST00000493886 UBASH3BQ8TF42 649 aa12.74□□□□□ -0.37
VCP-207ENST00000493886 HOXB13Q92826 284 aaPredicted RBP12.74□□□□□ -0.37
VCP-207ENST00000493886 OSTF1Q92882 214 aa12.74□□□□□ -0.37
VCP-207ENST00000493886 PHOX2BQ99453 314 aa12.74□□□□□ -0.37
VCP-207ENST00000493886 NLGN3Q9NZ94 848 aa12.74□□□□□ -0.37
VCP-207ENST00000493886 TESQ9UGI8 421 aaKnown RBP12.74□□□□□ -0.37
VCP-207ENST00000493886 DIMT1Q9UNQ2 313 aaKnown RBP12.74□□□□□ -0.37
VCP-207ENST00000493886 TGFBR3LH3BV60 316 aa12.73□□□□□ -0.37
VCP-207ENST00000493886 PRODHO43272 600 aa12.73□□□□□ -0.37
VCP-207ENST00000493886 CDC123O75794 336 aaPredicted RBP12.73□□□□□ -0.37
VCP-207ENST00000493886 MAT1AQ00266 395 aaKnown RBP12.73□□□□□ -0.37
VCP-207ENST00000493886 RPL6Q02878 288 aaKnown RBP12.73□□□□□ -0.37
VCP-207ENST00000493886 STX4Q12846 297 aa12.73□□□□□ -0.37
VCP-207ENST00000493886 ZFP69Q49AA0 526 aa12.73□□□□□ -0.37
VCP-207ENST00000493886 CRTC2Q53ET0 693 aaPredicted RBP12.73□□□□□ -0.37
VCP-207ENST00000493886 SLC30A6Q6NXT4 461 aa12.73□□□□□ -0.37
VCP-207ENST00000493886 ZAR1Q86SH2 424 aa12.73□□□□□ -0.37
VCP-207ENST00000493886 LHFPL3Q86UP9 236 aa12.73□□□□□ -0.37
VCP-207ENST00000493886 PROKR2Q8NFJ6 384 aa12.73□□□□□ -0.37
VCP-207ENST00000493886 OTULINQ96BN8 352 aa12.73□□□□□ -0.37
VCP-207ENST00000493886 FYTTD1Q96QD9 318 aaKnown RBP12.73□□□□□ -0.37
VCP-207ENST00000493886 PRSS27Q9BQR3 290 aa12.73□□□□□ -0.37
VCP-207ENST00000493886 MIXL1Q9H2W2 232 aa12.73□□□□□ -0.37
VCP-207ENST00000493886 POLE3Q9NRF9 147 aa12.73□□□□□ -0.37
VCP-207ENST00000493886 COMMD3Q9UBI1 195 aa12.73□□□□□ -0.37
VCP-207ENST00000493886 CYB5R1Q9UHQ9 305 aa12.73□□□□□ -0.37
VCP-207ENST00000493886 MRPS33Q9Y291 106 aaKnown RBP12.73□□□□□ -0.37
VCP-207ENST00000493886 THADAQ6YHU6 1953 aa12.73□□□□□ -0.37
VCP-207ENST00000493886 MN1Q10571 1320 aaPredicted RBP12.73□□□□□ -0.37
VCP-207ENST00000493886 FABP12A6NFH5 140 aa12.73□□□□□ -0.37
VCP-207ENST00000493886 RGS13O14921 159 aa12.73□□□□□ -0.37
VCP-207ENST00000493886 NDUFS6O75380 124 aaKnown RBP12.73□□□□□ -0.37
VCP-207ENST00000493886 NCR1O76036 304 aa12.73□□□□□ -0.37
VCP-207ENST00000493886 RAB36O95755 333 aa12.73□□□□□ -0.37
VCP-207ENST00000493886 RFX3P48380 749 aa12.73□□□□□ -0.37
VCP-207ENST00000493886 GFERP55789 205 aa12.73□□□□□ -0.37
VCP-207ENST00000493886 OR1Q1Q15612 314 aa12.73□□□□□ -0.37
VCP-207ENST00000493886 DEFB133Q30KQ1 61 aa12.73□□□□□ -0.37
VCP-207ENST00000493886 PYDC2Q56P42 97 aa12.73□□□□□ -0.37
VCP-207ENST00000493886 ZC3H14Q6PJT7 736 aaKnown RBP12.73□□□□□ -0.37
VCP-207ENST00000493886 ZNF620Q6ZNG0 422 aa12.73□□□□□ -0.37
VCP-207ENST00000493886 OR4Q3Q8NH05 313 aa12.73□□□□□ -0.37
VCP-207ENST00000493886 RIT1Q92963 219 aa12.73□□□□□ -0.37
VCP-207ENST00000493886 RBM18Q96H35 190 aaKnown RBP12.73□□□□□ -0.37
VCP-207ENST00000493886 PCED1AQ9H1Q7 454 aa12.73□□□□□ -0.37
VCP-207ENST00000493886 FOLH1BQ9HBA9 442 aa12.73□□□□□ -0.37
VCP-207ENST00000493886 KRCC1Q9NPI7 259 aaPredicted RBP12.73□□□□□ -0.37
VCP-207ENST00000493886 MEIOCA2RUB1 952 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 CTNSO60931 367 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 NSA2O95478 260 aaKnown RBP12.72□□□□□ -0.37
VCP-207ENST00000493886 MYL12AP19105 171 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 GABRA4P48169 554 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 PSG6Q00889 435 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 MLLT11Q13015 90 aaPredicted RBP12.72□□□□□ -0.37
VCP-207ENST00000493886 FAM53BQ14153 422 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 ERV3-1Q14264 604 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 KLHL22Q53GT1 634 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 B3GLCTQ6Y288 498 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 C17orf82Q86X59 251 aaPredicted RBP12.72□□□□□ -0.37
VCP-207ENST00000493886 MARC2Q969Z3 335 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 TGM7Q96PF1 710 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 DCLRE1CQ96SD1 692 aaKnown RBP12.72□□□□□ -0.37
VCP-207ENST00000493886 LMF2Q9BU23 707 aaKnown RBP12.72□□□□□ -0.37
VCP-207ENST00000493886 C11orf54Q9H0W9 315 aaPredicted RBP12.72□□□□□ -0.37
VCP-207ENST00000493886 MCCC2Q9HCC0 563 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 PRTFDC1Q9NRG1 225 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 NUFIP1Q9UHK0 495 aaKnown RBP12.72□□□□□ -0.37
VCP-207ENST00000493886 PLCL2Q9UPR0 1127 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 CDC42EP2O14613 210 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 HRO43593 1189 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 SCO2O43819 266 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 EMDP50402 254 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 GAS1P54826 345 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.72□□□□□ -0.37
VCP-207ENST00000493886 ZNHIT3Q15649 155 aaPredicted RBP12.72□□□□□ -0.37
VCP-207ENST00000493886 PDZK1Q5T2W1 519 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 WDR88Q6ZMY6 472 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 ZNF595Q8IYB9 648 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 OR6C4Q8NGE1 309 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 RNFT2Q96EX2 444 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 HSPA12BQ96MM6 686 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 ZNF285Q96NJ3 590 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 SECISBP2Q96T21 854 aaKnown RBP12.72□□□□□ -0.37
VCP-207ENST00000493886 MRPS18AQ9NVS2 196 aaKnown RBP12.72□□□□□ -0.37
VCP-207ENST00000493886 SOHLH2Q9NX45 425 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 CDH10Q9Y6N8 788 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 ABCA7Q8IZY2 2146 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 SLC35F4A4IF30 521 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 HRKO00198 91 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 FMO6PO60774 539 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 SDC3O75056 442 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 SOX30O94993 753 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 ZNF3P17036 446 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 HNRNPKP61978 463 aaKnown RBP eCLIP12.72□□□□□ -0.37
VCP-207ENST00000493886 BTG2P78543 158 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 PLAURQ03405 335 aa12.72□□□□□ -0.37
VCP-207ENST00000493886 LAPTM4BQ86VI4 370 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms