RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.43□□□□□ -1.7
SND1-216ENST00000492840 PISDQ9UG56 409 aa4.43□□□□□ -1.7
SND1-216ENST00000492840 ZNF639Q9UID6 485 aa4.43□□□□□ -1.7
SND1-216ENST00000492840 ANAPC7Q9UJX3 599 aa4.43□□□□□ -1.7
SND1-216ENST00000492840 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.43□□□□□ -1.7
SND1-216ENST00000492840 MYO5AQ9Y4I1 1855 aaKnown RBP4.43□□□□□ -1.7
SND1-216ENST00000492840 DSPP15924 2871 aaKnown RBP4.43□□□□□ -1.7
SND1-216ENST00000492840 SPTAN1Q13813 2472 aaKnown RBP4.43□□□□□ -1.7
SND1-216ENST00000492840 GREB1LQ9C091 1923 aaPredicted RBP4.42□□□□□ -1.7
SND1-216ENST00000492840 A0A1W2PR80 420 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 CD8B2A6NJW9 211 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 TMCO5BA8MYB1 307 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 J3QKU1 62 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 OR7A17O14581 309 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 EI24O14681 340 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 CASKO14936 926 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 RANBP6O60518 1105 aaKnown RBP4.42□□□□□ -1.7
SND1-216ENST00000492840 UPK3AO75631 287 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 CDC123O75794 336 aaPredicted RBP4.42□□□□□ -1.7
SND1-216ENST00000492840 IGSF6O95976 241 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 OAS1P00973 400 aaKnown RBP4.42□□□□□ -1.7
SND1-216ENST00000492840 KRT14P02533 472 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 EDNRAP25101 427 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 MARK3P27448 753 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 HPCAL1P37235 193 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 BRCC3P46736 316 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 NOVA1P51513 510 aaKnown RBP4.42□□□□□ -1.7
SND1-216ENST00000492840 TIMM10P62072 90 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 ATXN7L3Q14CW9 347 aaPredicted RBP4.42□□□□□ -1.7
SND1-216ENST00000492840 LPAL2Q16609 132 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 SGSM1Q2NKQ1 1148 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 PDZK1Q5T2W1 519 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 AGAP7PQ5VUJ5 663 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 C9orf57Q5W0N0 161 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 OR4F3Q6IEY1 312 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 C11orf87Q6NUJ2 197 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 FAM71F2Q6NXP2 309 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 DOK6Q6PKX4 331 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 C16orf82Q7Z2V1 217 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 LACC1Q8IV20 430 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 OFCC1Q8IZS5 231 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 NAGSQ8N159 534 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 ZNF321PQ8N8H1 164 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 SPATA4Q8NEY3 305 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 OR5AP2Q8NGF4 316 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 OR5T2Q8NGG2 359 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 OR1K1Q8NGR3 316 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 KCNG3Q8TAE7 436 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 SLC22A8Q8TCC7 542 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 SMAP2Q8WU79 429 aaPredicted RBP4.42□□□□□ -1.7
SND1-216ENST00000492840 SCFD1Q8WVM8 642 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 HMCESQ96FZ2 354 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 C7orf34Q96L11 122 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 AGAP4Q96P64 663 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 COMMD4Q9H0A8 199 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 LRRN3Q9H3W5 708 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 Q9HAA7 133 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 PLEKHA3Q9HB20 300 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 NEK6Q9HC98 313 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 EIF3LQ9Y262 564 aaKnown RBP4.42□□□□□ -1.7
SND1-216ENST00000492840 SLC9A8Q9Y2E8 581 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 MEMO1Q9Y316 297 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 NEUROG3Q9Y4Z2 214 aa4.42□□□□□ -1.7
SND1-216ENST00000492840 DOPEY1Q5JWR5 2465 aa4.41□□□□□ -1.7
SND1-216ENST00000492840 TICRRQ7Z2Z1 1910 aa4.41□□□□□ -1.7
SND1-216ENST00000492840 A0A1B0GVL5 298 aa4.41□□□□□ -1.7
SND1-216ENST00000492840 A0A1W2PNV4 684 aa4.41□□□□□ -1.7
SND1-216ENST00000492840 ZNF724A8MTY0 619 aa4.41□□□□□ -1.7
SND1-216ENST00000492840 HAS3O00219 553 aa4.41□□□□□ -1.7
SND1-216ENST00000492840 PES1O00541 588 aaKnown RBP4.41□□□□□ -1.7
SND1-216ENST00000492840 ABCD4O14678 606 aa4.41□□□□□ -1.7
SND1-216ENST00000492840 RNF13O43567 381 aa4.41□□□□□ -1.7
SND1-216ENST00000492840 SRPX2O60687 465 aaPredicted RBP4.41□□□□□ -1.7
SND1-216ENST00000492840 KHDRBS3O75525 346 aaKnown RBP4.41□□□□□ -1.7
SND1-216ENST00000492840 STX11O75558 287 aa4.41□□□□□ -1.7
SND1-216ENST00000492840 TRMUO75648 421 aaKnown RBP4.41□□□□□ -1.7
SND1-216ENST00000492840 SORBS2O94875 1100 aaKnown RBP4.41□□□□□ -1.7
SND1-216ENST00000492840 SLITRK3O94933 977 aa4.41□□□□□ -1.7
SND1-216ENST00000492840 CLPTM1O96005 669 aa4.41□□□□□ -1.7
SND1-216ENST00000492840 PAX1P15863 534 aa4.41□□□□□ -1.7
SND1-216ENST00000492840 XRCC1P18887 633 aaPredicted RBP4.41□□□□□ -1.7
SND1-216ENST00000492840 PGCP20142 388 aa4.41□□□□□ -1.7
SND1-216ENST00000492840 LEPRP48357 1165 aaKnown RBP4.41□□□□□ -1.7
SND1-216ENST00000492840 TPMTP51580 245 aa4.41□□□□□ -1.7
SND1-216ENST00000492840 DSCR9P59020 149 aa4.41□□□□□ -1.7
SND1-216ENST00000492840 ENPEPQ07075 957 aa4.41□□□□□ -1.7
SND1-216ENST00000492840 ACCSLQ4AC99 568 aa4.41□□□□□ -1.7
SND1-216ENST00000492840 GTDC1Q4AE62 458 aa4.41□□□□□ -1.7
SND1-216ENST00000492840 UNC50Q53HI1 259 aa4.41□□□□□ -1.7
SND1-216ENST00000492840 SPANXN2Q5MJ10 180 aa4.41□□□□□ -1.7
SND1-216ENST00000492840 STPG1Q5TH74 334 aa4.41□□□□□ -1.7
SND1-216ENST00000492840 BHLHB9Q6PI77 547 aa4.41□□□□□ -1.7
SND1-216ENST00000492840 BTNL3Q6UXE8 466 aa4.41□□□□□ -1.7
SND1-216ENST00000492840 TRPT1Q86TN4 253 aaKnown RBP4.41□□□□□ -1.7
SND1-216ENST00000492840 EGFL6Q8IUX8 553 aa4.41□□□□□ -1.7
SND1-216ENST00000492840 CIARTQ8N365 385 aaPredicted RBP4.41□□□□□ -1.7
SND1-216ENST00000492840 GPR137CQ8N3F9 429 aa4.41□□□□□ -1.7
SND1-216ENST00000492840 OR1L4Q8NGR5 311 aa4.41□□□□□ -1.7
SND1-216ENST00000492840 M1APQ8TC57 530 aa4.41□□□□□ -1.7
SND1-216ENST00000492840 NTN5Q8WTR8 489 aaPredicted RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms