RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 PGCP20142 388 aa20.5■□□□□ 0.87
COL9A3-213ENST00000489045 MAGOHP61326 146 aaKnown RBP20.5■□□□□ 0.87
COL9A3-213ENST00000489045 TMEM201Q5SNT2 666 aa20.5■□□□□ 0.87
COL9A3-213ENST00000489045 C3orf33Q6P1S2 294 aa20.5■□□□□ 0.87
COL9A3-213ENST00000489045 NUFIP2Q7Z417 695 aaKnown RBP20.5■□□□□ 0.87
COL9A3-213ENST00000489045 TUSC5Q8IXB3 177 aa20.5■□□□□ 0.87
COL9A3-213ENST00000489045 ZNF619Q8N2I2 560 aa20.5■□□□□ 0.87
COL9A3-213ENST00000489045 FAM71CQ8NEG0 241 aa20.5■□□□□ 0.87
COL9A3-213ENST00000489045 PANX1Q96RD7 426 aa20.5■□□□□ 0.87
COL9A3-213ENST00000489045 SAP130Q9H0E3 1048 aa20.5■□□□□ 0.87
COL9A3-213ENST00000489045 UBTD1Q9HAC8 227 aa20.5■□□□□ 0.87
COL9A3-213ENST00000489045 BEX4Q9NWD9 120 aaPredicted RBP20.5■□□□□ 0.87
COL9A3-213ENST00000489045 GPR45Q9Y5Y3 372 aa20.5■□□□□ 0.87
COL9A3-213ENST00000489045 PRR14LQ5THK1 2151 aa20.49■□□□□ 0.87
COL9A3-213ENST00000489045 IGHV3-15A0A0B4J1V0 119 aa20.49■□□□□ 0.87
COL9A3-213ENST00000489045 PRAMEF27A3QJZ7 478 aa20.49■□□□□ 0.87
COL9A3-213ENST00000489045 HMGN4O00479 90 aa20.49■□□□□ 0.87
COL9A3-213ENST00000489045 BCAS1O75363 584 aaPredicted RBP20.49■□□□□ 0.87
COL9A3-213ENST00000489045 ERLIN1O75477 346 aa20.49■□□□□ 0.87
COL9A3-213ENST00000489045 PRKD3O94806 890 aa20.49■□□□□ 0.87
COL9A3-213ENST00000489045 H6PDO95479 791 aa20.49■□□□□ 0.87
COL9A3-213ENST00000489045 PGRP06401 933 aa20.49■□□□□ 0.87
COL9A3-213ENST00000489045 LOXP28300 417 aaPredicted RBP20.49■□□□□ 0.87
COL9A3-213ENST00000489045 PGM1P36871 562 aa20.49■□□□□ 0.87
COL9A3-213ENST00000489045 CDKN2CP42773 168 aa20.49■□□□□ 0.87
COL9A3-213ENST00000489045 SLC18A1P54219 525 aa20.49■□□□□ 0.87
COL9A3-213ENST00000489045 SESN3P58005 492 aa20.49■□□□□ 0.87
COL9A3-213ENST00000489045 HPCAP84074 193 aa20.49■□□□□ 0.87
COL9A3-213ENST00000489045 GPAT3Q53EU6 434 aa20.49■□□□□ 0.87
COL9A3-213ENST00000489045 ATG16L1Q676U5 607 aa20.49■□□□□ 0.87
COL9A3-213ENST00000489045 HMGN2P46Q86SG4 172 aa20.49■□□□□ 0.87
COL9A3-213ENST00000489045 RNF130Q86XS8 419 aa20.49■□□□□ 0.87
COL9A3-213ENST00000489045 WFDC11Q8NEX6 87 aa20.49■□□□□ 0.87
COL9A3-213ENST00000489045 RAB3IL1Q8TBN0 382 aa20.49■□□□□ 0.87
COL9A3-213ENST00000489045 OIT3Q8WWZ8 545 aa20.49■□□□□ 0.87
COL9A3-213ENST00000489045 TLCD1Q96CP7 247 aa20.49■□□□□ 0.87
COL9A3-213ENST00000489045 OR5B2Q96R09 309 aa20.49■□□□□ 0.87
COL9A3-213ENST00000489045 INPP5KQ9BT40 448 aa20.49■□□□□ 0.87
COL9A3-213ENST00000489045 ACTR6Q9GZN1 396 aa20.49■□□□□ 0.87
COL9A3-213ENST00000489045 NKIRAS1Q9NYS0 192 aa20.49■□□□□ 0.87
COL9A3-213ENST00000489045 SLC35A3Q9Y2D2 325 aa20.49■□□□□ 0.87
COL9A3-213ENST00000489045 DSCAMO60469 2012 aa20.49■□□□□ 0.87
COL9A3-213ENST00000489045 CCDC154A6NI56 674 aa20.48■□□□□ 0.87
COL9A3-213ENST00000489045 ENPP1P22413 925 aa20.48■□□□□ 0.87
COL9A3-213ENST00000489045 RAC3P60763 192 aa20.48■□□□□ 0.87
COL9A3-213ENST00000489045 MERTKQ12866 999 aa20.48■□□□□ 0.87
COL9A3-213ENST00000489045 NXNQ6DKJ4 435 aa20.48■□□□□ 0.87
COL9A3-213ENST00000489045 TFAP2EQ6VUC0 442 aa20.48■□□□□ 0.87
COL9A3-213ENST00000489045 CXorf67Q86X51 503 aaPredicted RBP20.48■□□□□ 0.87
COL9A3-213ENST00000489045 TRIML2Q8N7C3 387 aa20.48■□□□□ 0.87
COL9A3-213ENST00000489045 TMEM234Q8WY98 164 aa20.48■□□□□ 0.87
COL9A3-213ENST00000489045 ARL8AQ96BM9 186 aa20.48■□□□□ 0.87
COL9A3-213ENST00000489045 ZG16BQ96DA0 208 aa20.48■□□□□ 0.87
COL9A3-213ENST00000489045 OR52E6Q96RD3 313 aa20.48■□□□□ 0.87
COL9A3-213ENST00000489045 ZBTB18Q99592 522 aa20.48■□□□□ 0.87
COL9A3-213ENST00000489045 TMBIM4Q9HC24 238 aa20.48■□□□□ 0.87
COL9A3-213ENST00000489045 GP6Q9HCN6 339 aa20.48■□□□□ 0.87
COL9A3-213ENST00000489045 ACER3Q9NUN7 267 aa20.48■□□□□ 0.87
COL9A3-213ENST00000489045 GPR52Q9Y2T5 361 aa20.48■□□□□ 0.87
COL9A3-213ENST00000489045 ZFHX3Q15911 3703 aa20.48■□□□□ 0.87
COL9A3-213ENST00000489045 ROS1P08922 2347 aa20.47■□□□□ 0.87
COL9A3-213ENST00000489045 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.47■□□□□ 0.87
COL9A3-213ENST00000489045 DIAPH2O60879 1101 aa20.47■□□□□ 0.87
COL9A3-213ENST00000489045 YES1P07947 543 aa20.47■□□□□ 0.87
COL9A3-213ENST00000489045 PSMB1P20618 241 aaKnown RBP20.47■□□□□ 0.87
COL9A3-213ENST00000489045 HOXC12P31275 282 aa20.47■□□□□ 0.87
COL9A3-213ENST00000489045 CHRNEQ04844 493 aa20.47■□□□□ 0.87
COL9A3-213ENST00000489045 ACKR1Q16570 336 aa20.47■□□□□ 0.87
COL9A3-213ENST00000489045 AP1ARQ63HQ0 302 aa20.47■□□□□ 0.87
COL9A3-213ENST00000489045 PLEKHM3Q6ZWE6 761 aa20.47■□□□□ 0.87
COL9A3-213ENST00000489045 SLC43A2Q8N370 569 aa20.47■□□□□ 0.87
COL9A3-213ENST00000489045 MANSC1Q9H8J5 431 aa20.47■□□□□ 0.87
COL9A3-213ENST00000489045 DLL4Q9NR61 685 aa20.47■□□□□ 0.87
COL9A3-213ENST00000489045 SERINC1Q9NRX5 453 aa20.47■□□□□ 0.87
COL9A3-213ENST00000489045 CLDN24A6NM45 220 aa20.46■□□□□ 0.87
COL9A3-213ENST00000489045 SLCO1B7G3V0H7 640 aa20.46■□□□□ 0.87
COL9A3-213ENST00000489045 SMAD9O15198 467 aaKnown RBP20.46■□□□□ 0.87
COL9A3-213ENST00000489045 KLF4O43474 513 aa20.46■□□□□ 0.87
COL9A3-213ENST00000489045 GSNP06396 782 aa20.46■□□□□ 0.87
COL9A3-213ENST00000489045 PLAURQ03405 335 aa20.46■□□□□ 0.87
COL9A3-213ENST00000489045 LRRC74AQ0VAA2 488 aa20.46■□□□□ 0.87
COL9A3-213ENST00000489045 SYPL1Q16563 259 aa20.46■□□□□ 0.87
COL9A3-213ENST00000489045 SLC9B1Q4ZJI4 515 aa20.46■□□□□ 0.87
COL9A3-213ENST00000489045 BEX5Q5H9J7 111 aa20.46■□□□□ 0.87
COL9A3-213ENST00000489045 BEND6Q5SZJ8 279 aaPredicted RBP20.46■□□□□ 0.87
COL9A3-213ENST00000489045 ZNF621Q6ZSS3 439 aa20.46■□□□□ 0.87
COL9A3-213ENST00000489045 WFDC8Q8IUA0 241 aa20.46■□□□□ 0.87
COL9A3-213ENST00000489045 KRTAP1-3Q8IUG1 177 aa20.46■□□□□ 0.87
COL9A3-213ENST00000489045 ANKFN1Q8N957 763 aa20.46■□□□□ 0.87
COL9A3-213ENST00000489045 ZNF563Q8TA94 476 aa20.46■□□□□ 0.87
COL9A3-213ENST00000489045 PNPT1Q8TCS8 783 aaKnown RBP20.46■□□□□ 0.87
COL9A3-213ENST00000489045 MAELQ96JY0 434 aaKnown RBP20.46■□□□□ 0.87
COL9A3-213ENST00000489045 PSD2Q9BQI7 771 aa20.46■□□□□ 0.87
COL9A3-213ENST00000489045 OR10A4Q9H209 315 aa20.46■□□□□ 0.87
COL9A3-213ENST00000489045 KLHL9Q9P2J3 617 aa20.46■□□□□ 0.87
COL9A3-213ENST00000489045 ING1Q9UK53 422 aaPredicted RBP20.46■□□□□ 0.87
COL9A3-213ENST00000489045 ARID1AO14497 2285 aa20.46■□□□□ 0.87
COL9A3-213ENST00000489045 GCM2O75603 506 aaPredicted RBP20.45■□□□□ 0.86
COL9A3-213ENST00000489045 IDO1P14902 403 aa20.45■□□□□ 0.86
COL9A3-213ENST00000489045 FPR1P21462 350 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms