RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 STOML1Q9UBI4 398 aa17.65■□□□□ 0.42
SEC22A-208ENST00000487572 SLC13A4Q9UKG4 626 aa17.65■□□□□ 0.42
SEC22A-208ENST00000487572 FASNP49327 2511 aaKnown RBP17.65■□□□□ 0.42
SEC22A-208ENST00000487572 GTF3C1Q12789 2109 aa17.65■□□□□ 0.42
SEC22A-208ENST00000487572 ELOVL7A1L3X0 281 aa17.64■□□□□ 0.41
SEC22A-208ENST00000487572 CLEC18AA5D8T8 446 aa17.64■□□□□ 0.41
SEC22A-208ENST00000487572 EIF1AYO14602 144 aaKnown RBP17.64■□□□□ 0.41
SEC22A-208ENST00000487572 ZG16O60844 167 aa17.64■□□□□ 0.41
SEC22A-208ENST00000487572 NTN1O95631 604 aa17.64■□□□□ 0.41
SEC22A-208ENST00000487572 RNF224P0DH78 156 aa17.64■□□□□ 0.41
SEC22A-208ENST00000487572 ADH6P28332 368 aa17.64■□□□□ 0.41
SEC22A-208ENST00000487572 SFTPDP35247 375 aa17.64■□□□□ 0.41
SEC22A-208ENST00000487572 PTGER4P35408 488 aa17.64■□□□□ 0.41
SEC22A-208ENST00000487572 NUP107P57740 925 aa17.64■□□□□ 0.41
SEC22A-208ENST00000487572 SLC25A3Q00325 362 aa17.64■□□□□ 0.41
SEC22A-208ENST00000487572 HOXC5Q00444 222 aa17.64■□□□□ 0.41
SEC22A-208ENST00000487572 PMPCAQ10713 525 aa17.64■□□□□ 0.41
SEC22A-208ENST00000487572 SLC25A53Q5H9E4 307 aa17.64■□□□□ 0.41
SEC22A-208ENST00000487572 MTFR2Q6P444 385 aa17.64■□□□□ 0.41
SEC22A-208ENST00000487572 PLXDC2Q6UX71 529 aa17.64■□□□□ 0.41
SEC22A-208ENST00000487572 CLEC18BQ6UXF7 455 aa17.64■□□□□ 0.41
SEC22A-208ENST00000487572 GRAMD2AQ8IUY3 354 aa17.64■□□□□ 0.41
SEC22A-208ENST00000487572 LILRA2Q8N149 483 aa17.64■□□□□ 0.41
SEC22A-208ENST00000487572 CADM2Q8N3J6 435 aa17.64■□□□□ 0.41
SEC22A-208ENST00000487572 CLEC18CQ8NCF0 446 aa17.64■□□□□ 0.41
SEC22A-208ENST00000487572 TAMM41Q96BW9 452 aa17.64■□□□□ 0.41
SEC22A-208ENST00000487572 NSL1Q96IY1 281 aa17.64■□□□□ 0.41
SEC22A-208ENST00000487572 PINK1Q9BXM7 581 aa17.64■□□□□ 0.41
SEC22A-208ENST00000487572 ALG2Q9H553 416 aa17.64■□□□□ 0.41
SEC22A-208ENST00000487572 SPAG4Q9NPE6 437 aa17.64■□□□□ 0.41
SEC22A-208ENST00000487572 ACER3Q9NUN7 267 aa17.64■□□□□ 0.41
SEC22A-208ENST00000487572 MED12Q93074 2177 aa17.64■□□□□ 0.41
SEC22A-208ENST00000487572 CLCA1A8K7I4 914 aa17.63■□□□□ 0.41
SEC22A-208ENST00000487572 GSTA4O15217 222 aa17.63■□□□□ 0.41
SEC22A-208ENST00000487572 EFNA2O43921 213 aa17.63■□□□□ 0.41
SEC22A-208ENST00000487572 LDLRP01130 860 aa17.63■□□□□ 0.41
SEC22A-208ENST00000487572 HOXD4P09016 255 aaPredicted RBP17.63■□□□□ 0.41
SEC22A-208ENST00000487572 GLI4P10075 376 aa17.63■□□□□ 0.41
SEC22A-208ENST00000487572 ELK4P28324 431 aa17.63■□□□□ 0.41
SEC22A-208ENST00000487572 ACAA2P42765 397 aaKnown RBP17.63■□□□□ 0.41
SEC22A-208ENST00000487572 GSK3BP49841 420 aa17.63■□□□□ 0.41
SEC22A-208ENST00000487572 CLDN15P56746 228 aa17.63■□□□□ 0.41
SEC22A-208ENST00000487572 RAC1P63000 192 aa17.63■□□□□ 0.41
SEC22A-208ENST00000487572 ADORA2A-AS1P86434 159 aa17.63■□□□□ 0.41
SEC22A-208ENST00000487572 VEZF1Q14119 521 aa17.63■□□□□ 0.41
SEC22A-208ENST00000487572 SF3B4Q15427 424 aaKnown RBP eCLIP17.63■□□□□ 0.411e-6■■■□□ 17.6
SEC22A-208ENST00000487572 TMEM211Q6ICI0 200 aa17.63■□□□□ 0.41
SEC22A-208ENST00000487572 PLEKHM3Q6ZWE6 761 aa17.63■□□□□ 0.41
SEC22A-208ENST00000487572 CHMP1BQ7LBR1 199 aa17.63■□□□□ 0.41
SEC22A-208ENST00000487572 GGNQ86UU5 652 aa17.63■□□□□ 0.41
SEC22A-208ENST00000487572 LSRQ86X29 649 aaPredicted RBP17.63■□□□□ 0.41
SEC22A-208ENST00000487572 OR10Q1Q8NGQ4 319 aa17.63■□□□□ 0.41
SEC22A-208ENST00000487572 SSC4DQ8WTU2 575 aa17.63■□□□□ 0.41
SEC22A-208ENST00000487572 KCTD14Q9BQ13 255 aaPredicted RBP17.63■□□□□ 0.41
SEC22A-208ENST00000487572 TTYH2Q9BSA4 534 aa17.63■□□□□ 0.41
SEC22A-208ENST00000487572 PACSIN3Q9UKS6 424 aa17.63■□□□□ 0.41
SEC22A-208ENST00000487572 ETV2O00321 342 aaPredicted RBP17.62■□□□□ 0.41
SEC22A-208ENST00000487572 EPPINO95925 133 aa17.62■□□□□ 0.41
SEC22A-208ENST00000487572 CCNA2P20248 432 aa17.62■□□□□ 0.41
SEC22A-208ENST00000487572 SHC1P29353 583 aa17.62■□□□□ 0.41
SEC22A-208ENST00000487572 MNAT1P51948 309 aa17.62■□□□□ 0.41
SEC22A-208ENST00000487572 EEFSECP57772 596 aaKnown RBP17.62■□□□□ 0.41
SEC22A-208ENST00000487572 COPZ1P61923 177 aa17.62■□□□□ 0.41
SEC22A-208ENST00000487572 SELENBP1Q13228 472 aa17.62■□□□□ 0.41
SEC22A-208ENST00000487572 LRRC23Q53EV4 343 aaPredicted RBP17.62■□□□□ 0.41
SEC22A-208ENST00000487572 PPP4R4Q6NUP7 873 aa17.62■□□□□ 0.41
SEC22A-208ENST00000487572 C16orf89Q6UX73 402 aa17.62■□□□□ 0.41
SEC22A-208ENST00000487572 CCDC80Q76M96 950 aa17.62■□□□□ 0.41
SEC22A-208ENST00000487572 TRPM8Q7Z2W7 1104 aa17.62■□□□□ 0.41
SEC22A-208ENST00000487572 GRINAQ7Z429 371 aa17.62■□□□□ 0.41
SEC22A-208ENST00000487572 PGAM4Q8N0Y7 254 aa17.62■□□□□ 0.41
SEC22A-208ENST00000487572 RNF148Q8N7C7 305 aa17.62■□□□□ 0.41
SEC22A-208ENST00000487572 BHLHE22Q8NFJ8 381 aaPredicted RBP17.62■□□□□ 0.41
SEC22A-208ENST00000487572 ZPLD1Q8TCW7 415 aa17.62■□□□□ 0.41
SEC22A-208ENST00000487572 PHF10Q8WUB8 498 aaKnown RBP17.62■□□□□ 0.41
SEC22A-208ENST00000487572 CTPS2Q9NRF8 586 aa17.62■□□□□ 0.41
SEC22A-208ENST00000487572 KLHL28Q9NXS3 571 aa17.62■□□□□ 0.41
SEC22A-208ENST00000487572 ABCD2Q9UBJ2 740 aa17.62■□□□□ 0.41
SEC22A-208ENST00000487572 FLNCQ14315 2725 aa17.61■□□□□ 0.41
SEC22A-208ENST00000487572 B2RBV5 119 aa17.61■□□□□ 0.41
SEC22A-208ENST00000487572 FAAHO00519 579 aa17.61■□□□□ 0.41
SEC22A-208ENST00000487572 TNFSF11O14788 317 aa17.61■□□□□ 0.41
SEC22A-208ENST00000487572 CD247P20963 164 aa17.61■□□□□ 0.41
SEC22A-208ENST00000487572 TACR3P29371 465 aa17.61■□□□□ 0.41
SEC22A-208ENST00000487572 SLC1A3P43003 542 aa17.61■□□□□ 0.41
SEC22A-208ENST00000487572 EIF1AXP47813 144 aaKnown RBP17.61■□□□□ 0.41
SEC22A-208ENST00000487572 RGS8P57771 180 aaPredicted RBP17.61■□□□□ 0.41
SEC22A-208ENST00000487572 RPS3AP61247 264 aaKnown RBP17.61■□□□□ 0.41
SEC22A-208ENST00000487572 SGCBQ16585 318 aa17.61■□□□□ 0.41
SEC22A-208ENST00000487572 DUSP7Q16829 419 aa17.61■□□□□ 0.41
SEC22A-208ENST00000487572 TMEM176BQ3YBM2 270 aaPredicted RBP17.61■□□□□ 0.41
SEC22A-208ENST00000487572 NSUN5P2Q63ZY6 315 aa17.61■□□□□ 0.41
SEC22A-208ENST00000487572 LACC1Q8IV20 430 aa17.61■□□□□ 0.41
SEC22A-208ENST00000487572 DEFB107AQ8IZN7 70 aa17.61■□□□□ 0.41
SEC22A-208ENST00000487572 GPR32P1Q8NGA4 272 aa17.61■□□□□ 0.41
SEC22A-208ENST00000487572 FIG4Q92562 907 aa17.61■□□□□ 0.41
SEC22A-208ENST00000487572 RND1Q92730 232 aa17.61■□□□□ 0.41
SEC22A-208ENST00000487572 ZNF845Q96IR2 970 aaPredicted RBP17.61■□□□□ 0.41
SEC22A-208ENST00000487572 KLHL15Q96M94 604 aa17.61■□□□□ 0.41
SEC22A-208ENST00000487572 SERINC1Q9NRX5 453 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms