RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 EXOSC6Q5RKV6 272 aaKnown RBP9.49□□□□□ -0.89
SMARCC1-205ENST00000483847 ZNF678Q5SXM1 525 aa9.49□□□□□ -0.89
SMARCC1-205ENST00000483847 TEX35Q5T0J7 233 aa9.49□□□□□ -0.89
SMARCC1-205ENST00000483847 ABLIM2Q6H8Q1 611 aa9.49□□□□□ -0.89
SMARCC1-205ENST00000483847 LRIG3Q6UXM1 1119 aa9.49□□□□□ -0.89
SMARCC1-205ENST00000483847 SLC46A3Q7Z3Q1 461 aa9.49□□□□□ -0.89
SMARCC1-205ENST00000483847 LINC01356Q8N9X3 169 aa9.49□□□□□ -0.89
SMARCC1-205ENST00000483847 OR52E4Q8NGH9 312 aa9.49□□□□□ -0.89
SMARCC1-205ENST00000483847 CEP70Q8NHQ1 597 aa9.49□□□□□ -0.89
SMARCC1-205ENST00000483847 RFWD2Q8NHY2 731 aa9.49□□□□□ -0.89
SMARCC1-205ENST00000483847 ZFAND2BQ8WV99 257 aa9.49□□□□□ -0.89
SMARCC1-205ENST00000483847 CDS1Q92903 461 aa9.49□□□□□ -0.89
SMARCC1-205ENST00000483847 MS4A4EQ96PG1 132 aa9.49□□□□□ -0.89
SMARCC1-205ENST00000483847 SNX18Q96RF0 628 aa9.49□□□□□ -0.89
SMARCC1-205ENST00000483847 TAS2R16Q9NYV7 291 aa9.49□□□□□ -0.89
SMARCC1-205ENST00000483847 MALT1Q9UDY8 824 aa9.49□□□□□ -0.89
SMARCC1-205ENST00000483847 NOSIPQ9Y314 301 aaKnown RBP9.49□□□□□ -0.89
SMARCC1-205ENST00000483847 VWFP04275 2813 aa9.48□□□□□ -0.89
SMARCC1-205ENST00000483847 A0A0A6YYJ9 748 aa9.48□□□□□ -0.89
SMARCC1-205ENST00000483847 TMEM89A2RUT3 159 aa9.48□□□□□ -0.89
SMARCC1-205ENST00000483847 ESPNB1AK53 854 aa9.48□□□□□ -0.89
SMARCC1-205ENST00000483847 SLCO1B7G3V0H7 640 aa9.48□□□□□ -0.89
SMARCC1-205ENST00000483847 PDLIM1O00151 329 aa9.48□□□□□ -0.89
SMARCC1-205ENST00000483847 PDPK1O15530 556 aa9.48□□□□□ -0.89
SMARCC1-205ENST00000483847 STAMBPO95630 424 aa9.48□□□□□ -0.89
SMARCC1-205ENST00000483847 TACSTD2P09758 323 aa9.48□□□□□ -0.89
SMARCC1-205ENST00000483847 ALOX5P09917 674 aa9.48□□□□□ -0.89
SMARCC1-205ENST00000483847 EFNA1P20827 205 aaPredicted RBP9.48□□□□□ -0.89
SMARCC1-205ENST00000483847 GIFP27352 417 aa9.48□□□□□ -0.89
SMARCC1-205ENST00000483847 PAFAH1B1P43034 410 aa9.48□□□□□ -0.89
SMARCC1-205ENST00000483847 CHN2P52757 468 aa9.48□□□□□ -0.89
SMARCC1-205ENST00000483847 CDH15P55291 814 aa9.48□□□□□ -0.89
SMARCC1-205ENST00000483847 SUMO3P55854 103 aaPredicted RBP9.48□□□□□ -0.89
SMARCC1-205ENST00000483847 POU6F2P78424 691 aaPredicted RBP9.48□□□□□ -0.89
SMARCC1-205ENST00000483847 QPRTQ15274 297 aa9.48□□□□□ -0.89
SMARCC1-205ENST00000483847 TRIP10Q15642 601 aa9.48□□□□□ -0.89
SMARCC1-205ENST00000483847 OR7E24Q6IFN5 339 aa9.48□□□□□ -0.89
SMARCC1-205ENST00000483847 NOXRED1Q6NXP6 359 aa9.48□□□□□ -0.89
SMARCC1-205ENST00000483847 SPATA19Q7Z5L4 167 aa9.48□□□□□ -0.89
SMARCC1-205ENST00000483847 MTERF4Q7Z6M4 381 aaKnown RBP9.48□□□□□ -0.89
SMARCC1-205ENST00000483847 ZNF527Q8NB42 609 aa9.48□□□□□ -0.89
SMARCC1-205ENST00000483847 ZNF540Q8NDQ6 660 aa9.48□□□□□ -0.89
SMARCC1-205ENST00000483847 JADE3Q92613 823 aa9.48□□□□□ -0.89
SMARCC1-205ENST00000483847 GCDHQ92947 438 aaPredicted RBP9.48□□□□□ -0.89
SMARCC1-205ENST00000483847 DNAJA3Q96EY1 480 aa9.48□□□□□ -0.89
SMARCC1-205ENST00000483847 BTBD2Q9BX70 525 aa9.48□□□□□ -0.89
SMARCC1-205ENST00000483847 ACSS3Q9H6R3 686 aa9.48□□□□□ -0.89
SMARCC1-205ENST00000483847 MYOZ1Q9NP98 299 aaPredicted RBP9.48□□□□□ -0.89
SMARCC1-205ENST00000483847 SLC17A5Q9NRA2 495 aa9.48□□□□□ -0.89
SMARCC1-205ENST00000483847 EMC3Q9P0I2 261 aa9.48□□□□□ -0.89
SMARCC1-205ENST00000483847 PRKDCP78527 4128 aaKnown RBP9.47□□□□□ -0.89
SMARCC1-205ENST00000483847 SERTM1A2A2V5 107 aa9.47□□□□□ -0.89
SMARCC1-205ENST00000483847 FAM157AC9JC47 383 aa9.47□□□□□ -0.89
SMARCC1-205ENST00000483847 SULT2B1O00204 365 aa9.47□□□□□ -0.89
SMARCC1-205ENST00000483847 ETV2O00321 342 aaPredicted RBP9.47□□□□□ -0.89
SMARCC1-205ENST00000483847 ZSCAN12O43309 604 aa9.47□□□□□ -0.89
SMARCC1-205ENST00000483847 ENO1P06733 434 aaKnown RBP9.47□□□□□ -0.89
SMARCC1-205ENST00000483847 SERPINF1P36955 418 aa9.47□□□□□ -0.89
SMARCC1-205ENST00000483847 CCR4P51679 360 aa9.47□□□□□ -0.89
SMARCC1-205ENST00000483847 CAV1Q03135 178 aa9.47□□□□□ -0.89
SMARCC1-205ENST00000483847 LGALS3BPQ08380 585 aa9.47□□□□□ -0.89
SMARCC1-205ENST00000483847 C2orf54Q08AI8 447 aa9.47□□□□□ -0.89
SMARCC1-205ENST00000483847 LCP2Q13094 533 aa9.47□□□□□ -0.89
SMARCC1-205ENST00000483847 CCNIQ14094 377 aa9.47□□□□□ -0.89
SMARCC1-205ENST00000483847 TIGD2Q4W5G0 525 aa9.47□□□□□ -0.89
SMARCC1-205ENST00000483847 CDC73Q6P1J9 531 aa9.47□□□□□ -0.89
SMARCC1-205ENST00000483847 C3orf33Q6P1S2 294 aa9.47□□□□□ -0.89
SMARCC1-205ENST00000483847 TMPPEQ6ZT21 453 aa9.47□□□□□ -0.89
SMARCC1-205ENST00000483847 IKBIPQ70UQ0 350 aa9.47□□□□□ -0.89
SMARCC1-205ENST00000483847 TMCO5AQ8N6Q1 288 aa9.47□□□□□ -0.89
SMARCC1-205ENST00000483847 HPS1Q92902 700 aa9.47□□□□□ -0.89
SMARCC1-205ENST00000483847 NINJ2Q9NZG7 142 aa9.47□□□□□ -0.89
SMARCC1-205ENST00000483847 TMEM216Q9P0N5 145 aa9.47□□□□□ -0.89
SMARCC1-205ENST00000483847 WBP11Q9Y2W2 641 aaKnown RBP9.47□□□□□ -0.89
SMARCC1-205ENST00000483847 AMDHD2Q9Y303 409 aa9.47□□□□□ -0.89
SMARCC1-205ENST00000483847 KCNE3Q9Y6H6 103 aa9.47□□□□□ -0.89
SMARCC1-205ENST00000483847 TRIM49D1C9J1S8 452 aa9.46□□□□□ -0.9
SMARCC1-205ENST00000483847 NPIPB9F8W1W9 429 aa9.46□□□□□ -0.9
SMARCC1-205ENST00000483847 GTPBP1O00178 669 aaKnown RBP9.46□□□□□ -0.9
SMARCC1-205ENST00000483847 KLF11O14901 512 aa9.46□□□□□ -0.9
SMARCC1-205ENST00000483847 AKAP10O43572 662 aa9.46□□□□□ -0.9
SMARCC1-205ENST00000483847 HSPA4LO95757 839 aa9.46□□□□□ -0.9
SMARCC1-205ENST00000483847 HMGN2P05204 90 aaKnown RBP9.46□□□□□ -0.9
SMARCC1-205ENST00000483847 INHBAP08476 426 aa9.46□□□□□ -0.9
SMARCC1-205ENST00000483847 DAOP14920 347 aa9.46□□□□□ -0.9
SMARCC1-205ENST00000483847 PGCP20142 388 aa9.46□□□□□ -0.9
SMARCC1-205ENST00000483847 IMPDH1P20839 514 aa9.46□□□□□ -0.9
SMARCC1-205ENST00000483847 FRKP42685 505 aaPredicted RBP9.46□□□□□ -0.9
SMARCC1-205ENST00000483847 DVL1P1P54792 670 aaPredicted RBP9.46□□□□□ -0.9
SMARCC1-205ENST00000483847 PKNOX1P55347 436 aa9.46□□□□□ -0.9
SMARCC1-205ENST00000483847 GNG11P61952 73 aa9.46□□□□□ -0.9
SMARCC1-205ENST00000483847 DEFA6Q01524 100 aa9.46□□□□□ -0.9
SMARCC1-205ENST00000483847 PDK3Q15120 406 aa9.46□□□□□ -0.9
SMARCC1-205ENST00000483847 ADIPOQQ15848 244 aa9.46□□□□□ -0.9
SMARCC1-205ENST00000483847 IMPG1Q17R60 797 aa9.46□□□□□ -0.9
SMARCC1-205ENST00000483847 PRR31Q5SQ13 230 aa9.46□□□□□ -0.9
SMARCC1-205ENST00000483847 DEF8Q6ZN54 512 aa9.46□□□□□ -0.9
SMARCC1-205ENST00000483847 MTDHQ86UE4 582 aaKnown RBP9.46□□□□□ -0.9
SMARCC1-205ENST00000483847 CCDC103Q8IW40 242 aa9.46□□□□□ -0.9
SMARCC1-205ENST00000483847 ZCCHC24Q8N2G6 241 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms