RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, human

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-215	ENST00000482714	SERINC1	Q9NRX5	453 aa		13.9	□□□□□ -0.18
CCM2-215	ENST00000482714	ASF1B	Q9NVP2	202 aa		13.9	□□□□□ -0.18
CCM2-215	ENST00000482714	NTNG1	Q9Y2I2	539 aa		13.9	□□□□□ -0.18
CCM2-215	ENST00000482714	BOD1L1	Q8NFC6	3051 aa		13.89	□□□□□ -0.19
CCM2-215	ENST00000482714	EIF4E1B	A6NMX2	242 aa	Known RBP	13.89	□□□□□ -0.19
CCM2-215	ENST00000482714	ADAM11	O75078	769 aa		13.89	□□□□□ -0.19
CCM2-215	ENST00000482714	IFNW1	P05000	195 aa		13.89	□□□□□ -0.19
CCM2-215	ENST00000482714	PEPD	P12955	493 aa		13.89	□□□□□ -0.19
CCM2-215	ENST00000482714	PSMA4	P25789	261 aa	Known RBP	13.89	□□□□□ -0.19
CCM2-215	ENST00000482714	MST1	P26927	711 aa		13.89	□□□□□ -0.19
CCM2-215	ENST00000482714	ELK4	P28324	431 aa		13.89	□□□□□ -0.19
CCM2-215	ENST00000482714	GFRA1	P56159	465 aa		13.89	□□□□□ -0.19
CCM2-215	ENST00000482714	RAC1	P63000	192 aa		13.89	□□□□□ -0.19
CCM2-215	ENST00000482714	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	13.89	□□□□□ -0.19
CCM2-215	ENST00000482714	ULK3	Q6PHR2	472 aa		13.89	□□□□□ -0.19
CCM2-215	ENST00000482714	ENPP6	Q6UWR7	440 aa		13.89	□□□□□ -0.19
CCM2-215	ENST00000482714	CYP2R1	Q6VVX0	501 aa		13.89	□□□□□ -0.19
CCM2-215	ENST00000482714	PIWIL3	Q7Z3Z3	882 aa	Known RBP	13.89	□□□□□ -0.19
CCM2-215	ENST00000482714	YRDC	Q86U90	279 aa	Known RBP	13.89	□□□□□ -0.19
CCM2-215	ENST00000482714	SARAF	Q96BY9	339 aa		13.89	□□□□□ -0.19
CCM2-215	ENST00000482714	HSH2D	Q96JZ2	352 aa		13.89	□□□□□ -0.19
CCM2-215	ENST00000482714	MCHR1	Q99705	422 aa		13.89	□□□□□ -0.19
CCM2-215	ENST00000482714	RPS6KB2	Q9UBS0	482 aa		13.89	□□□□□ -0.19
CCM2-215	ENST00000482714	VDAC3	Q9Y277	283 aa		13.89	□□□□□ -0.19
CCM2-215	ENST00000482714	SPIN1	Q9Y657	262 aa	Predicted RBP	13.89	□□□□□ -0.19
CCM2-215	ENST00000482714	AP4B1	Q9Y6B7	739 aa		13.89	□□□□□ -0.19
CCM2-215	ENST00000482714	TCRBV5S2	A0A599	114 aa		13.88	□□□□□ -0.19
CCM2-215	ENST00000482714	C17orf51	A8MQB3	221 aa		13.88	□□□□□ -0.19
CCM2-215	ENST00000482714	TPST2	O60704	377 aa		13.88	□□□□□ -0.19
CCM2-215	ENST00000482714	GPI	P06744	558 aa		13.88	□□□□□ -0.19
CCM2-215	ENST00000482714	PNMT	P11086	282 aa		13.88	□□□□□ -0.19
CCM2-215	ENST00000482714	PRG2	P13727	222 aa		13.88	□□□□□ -0.19
CCM2-215	ENST00000482714	RNF144A	P50876	292 aa	Predicted RBP	13.88	□□□□□ -0.19
CCM2-215	ENST00000482714	TDGF1P3	P51864	188 aa		13.88	□□□□□ -0.19
CCM2-215	ENST00000482714	B3GALT5-AS1	P59052	145 aa		13.88	□□□□□ -0.19
CCM2-215	ENST00000482714	OR1Q1	Q15612	314 aa		13.88	□□□□□ -0.19
CCM2-215	ENST00000482714	TOMM34	Q15785	309 aa	Predicted RBP	13.88	□□□□□ -0.19
CCM2-215	ENST00000482714	WIPI1	Q5MNZ9	446 aa	Predicted RBP	13.88	□□□□□ -0.19
CCM2-215	ENST00000482714	VASN	Q6EMK4	673 aa		13.88	□□□□□ -0.19
CCM2-215	ENST00000482714	PLEKHM3	Q6ZWE6	761 aa		13.88	□□□□□ -0.19
CCM2-215	ENST00000482714	VTCN1	Q7Z7D3	282 aa		13.88	□□□□□ -0.19
CCM2-215	ENST00000482714	COMTD1	Q86VU5	262 aa		13.88	□□□□□ -0.19
CCM2-215	ENST00000482714	PHF10	Q8WUB8	498 aa	Known RBP	13.88	□□□□□ -0.19
CCM2-215	ENST00000482714	SLC47A1	Q96FL8	570 aa		13.88	□□□□□ -0.19
CCM2-215	ENST00000482714	SFXN2	Q96NB2	322 aa		13.88	□□□□□ -0.19
CCM2-215	ENST00000482714	IL1RAP	Q9NPH3	570 aa		13.88	□□□□□ -0.19
CCM2-215	ENST00000482714	SELENON	Q9NZV5	590 aa		13.88	□□□□□ -0.19
CCM2-215	ENST00000482714	FAM32A	Q9Y421	112 aa	Known RBP	13.88	□□□□□ -0.19
CCM2-215	ENST00000482714	HRH3	Q9Y5N1	445 aa		13.88	□□□□□ -0.19
CCM2-215	ENST00000482714	OR2M5	A3KFT3	312 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	GJE1	A6NN92	205 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714		M0R3H8	397 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	BCKDK	O14874	412 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	ZNF208	O43345	1280 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	CPN1	P15169	458 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	RHCE	P18577	417 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	ATP6V1B2	P21281	511 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	POLR2H	P52434	150 aa	Known RBP	13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	CHRNB3	Q05901	458 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	RBPJ	Q06330	500 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	SF3B4	Q15427	424 aa	Known RBP eCLIP	13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	FAM98B	Q52LJ0	330 aa	Known RBP	13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	ENTPD8	Q5MY95	495 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	C1orf146	Q5VVC0	180 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	RAET1L	Q5VY80	246 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	C5orf46	Q6UWT4	87 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	CYP4Z1	Q86W10	505 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	PM20D2	Q8IYS1	436 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	ST6GALNAC3	Q8NDV1	305 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	OR4D11	Q8NGI4	311 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	POC1B	Q8TC44	478 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	SLC25A43	Q8WUT9	341 aa	Predicted RBP	13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	SLC38A4	Q969I6	547 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	ABTB1	Q969K4	478 aa	Predicted RBP	13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	UTP4	Q969X6	686 aa	Known RBP	13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	MPP4	Q96JB8	637 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	C7orf34	Q96L11	122 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	ZNF347	Q96SE7	839 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	EXO5	Q9H790	373 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	ENPP4	Q9Y6X5	453 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	TCRBV3S1	A0A5B6	114 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	TRAPPC13	A5PLN9	417 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	HTR3E	A5X5Y0	456 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	FRS3	O43559	492 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	GMFG	O60234	142 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	OR5F1	O95221	314 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	SEMG1	P04279	462 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	HOXD4	P09016	255 aa	Predicted RBP	13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	CELA3A	P09093	270 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	NQO1	P15559	274 aa	Known RBP	13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	BMP7	P18075	431 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	TACR3	P29371	465 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	OR1E2	P47887	323 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	MLLT10	P55197	1068 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	ST3GAL3	Q11203	375 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	MERTK	Q12866	999 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	SELENBP1	Q13228	472 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	NPTX1	Q15818	432 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	ADGRG3	Q86Y34	549 aa		13.87	□□□□□ -0.19
CCM2-215	ENST00000482714	CADM2	Q8N3J6	435 aa		13.87	□□□□□ -0.19

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