RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 ADH6P28332 368 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 SESN3P58005 492 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 ADAM8P78325 824 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 PLAURQ03405 335 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 CHRNEQ04844 493 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 MERTKQ12866 999 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 SYPL1Q16563 259 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 SLC9B1Q4ZJI4 515 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 COX20Q5RI15 118 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 TMEM201Q5SNT2 666 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 TFAP2EQ6VUC0 442 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 ZNF621Q6ZSS3 439 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 EIF3MQ7L2H7 374 aaKnown RBP9.33□□□□□ -0.92
CPSF4-212ENST00000482251 STK32CQ86UX6 486 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 CXorf67Q86X51 503 aaPredicted RBP9.33□□□□□ -0.92
CPSF4-212ENST00000482251 ANKFN1Q8N957 763 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 ZNF563Q8TA94 476 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 MIPOL1Q8TD10 442 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 ZNF775Q96BV0 537 aaPredicted RBP9.33□□□□□ -0.92
CPSF4-212ENST00000482251 ZG16BQ96DA0 208 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 MBD6Q96DN6 1003 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 CCDC115Q96NT0 180 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 OR52E6Q96RD3 313 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 ZNF300Q96RE9 604 aaPredicted RBP9.33□□□□□ -0.92
CPSF4-212ENST00000482251 ZBTB18Q99592 522 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 CCL19Q99731 98 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 TMUB1Q9BVT8 246 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 ACTR6Q9GZN1 396 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 LAT2Q9GZY6 243 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 TIGARQ9NQ88 270 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 PLSCR4Q9NRQ2 329 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 GLRX2Q9NS18 164 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 THAP1Q9NVV9 213 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 BTNL2Q9UIR0 455 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 GPR45Q9Y5Y3 372 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 TRPC5OSA6NMA1 111 aa9.32□□□□□ -0.92
CPSF4-212ENST00000482251 AP3D1O14617 1153 aa9.32□□□□□ -0.92
CPSF4-212ENST00000482251 SMAD9O15198 467 aaKnown RBP9.32□□□□□ -0.92
CPSF4-212ENST00000482251 ADAM11O75078 769 aa9.32□□□□□ -0.92
CPSF4-212ENST00000482251 ERLIN1O75477 346 aa9.32□□□□□ -0.92
CPSF4-212ENST00000482251 SOX30O94993 753 aa9.32□□□□□ -0.92
CPSF4-212ENST00000482251 AGR2O95994 175 aa9.32□□□□□ -0.92
CPSF4-212ENST00000482251 FESP07332 822 aa9.32□□□□□ -0.92
CPSF4-212ENST00000482251 CHRM4P08173 479 aa9.32□□□□□ -0.92
CPSF4-212ENST00000482251 TFPIP10646 304 aa9.32□□□□□ -0.92
CPSF4-212ENST00000482251 PGCP20142 388 aa9.32□□□□□ -0.92
CPSF4-212ENST00000482251 CCNA2P20248 432 aa9.32□□□□□ -0.92
CPSF4-212ENST00000482251 EDNRAP25101 427 aa9.32□□□□□ -0.92
CPSF4-212ENST00000482251 LOXP28300 417 aaPredicted RBP9.32□□□□□ -0.92
CPSF4-212ENST00000482251 PGM1P36871 562 aa9.32□□□□□ -0.92
CPSF4-212ENST00000482251 RNPS1Q15287 305 aaKnown RBP9.32□□□□□ -0.92
CPSF4-212ENST00000482251 GTDC1Q4AE62 458 aa9.32□□□□□ -0.92
CPSF4-212ENST00000482251 SLC25A53Q5H9E4 307 aa9.32□□□□□ -0.92
CPSF4-212ENST00000482251 BEND6Q5SZJ8 279 aaPredicted RBP9.32□□□□□ -0.92
CPSF4-212ENST00000482251 ATG16L1Q676U5 607 aa9.32□□□□□ -0.92
CPSF4-212ENST00000482251 BEND4Q6ZU67 534 aa9.32□□□□□ -0.92
CPSF4-212ENST00000482251 PLEKHM3Q6ZWE6 761 aa9.32□□□□□ -0.92
CPSF4-212ENST00000482251 SPATA19Q7Z5L4 167 aa9.32□□□□□ -0.92
CPSF4-212ENST00000482251 KRTAP1-3Q8IUG1 177 aa9.32□□□□□ -0.92
CPSF4-212ENST00000482251 LRRC34Q8IZ02 419 aa9.32□□□□□ -0.92
CPSF4-212ENST00000482251 FAM71CQ8NEG0 241 aa9.32□□□□□ -0.92
CPSF4-212ENST00000482251 OR9I1Q8NGQ6 314 aa9.32□□□□□ -0.92
CPSF4-212ENST00000482251 S100PBPQ96BU1 408 aa9.32□□□□□ -0.92
CPSF4-212ENST00000482251 TLCD1Q96CP7 247 aa9.32□□□□□ -0.92
CPSF4-212ENST00000482251 PERPQ96FX8 193 aa9.32□□□□□ -0.92
CPSF4-212ENST00000482251 OR52B2Q96RD2 323 aa9.32□□□□□ -0.92
CPSF4-212ENST00000482251 OR11A1Q9GZK7 315 aa9.32□□□□□ -0.92
CPSF4-212ENST00000482251 MANSC1Q9H8J5 431 aa9.32□□□□□ -0.92
CPSF4-212ENST00000482251 TMBIM4Q9HC24 238 aa9.32□□□□□ -0.92
CPSF4-212ENST00000482251 CTPS2Q9NRF8 586 aa9.32□□□□□ -0.92
CPSF4-212ENST00000482251 SLC6A13Q9NSD5 602 aa9.32□□□□□ -0.92
CPSF4-212ENST00000482251 VPS13CQ709C8 3753 aa9.31□□□□□ -0.92
CPSF4-212ENST00000482251 RFXANKO14593 260 aa9.31□□□□□ -0.92
CPSF4-212ENST00000482251 GCM2O75603 506 aaPredicted RBP9.31□□□□□ -0.92
CPSF4-212ENST00000482251 PRKD3O94806 890 aa9.31□□□□□ -0.92
CPSF4-212ENST00000482251 PLAUP00749 431 aa9.31□□□□□ -0.92
CPSF4-212ENST00000482251 PABPC4LP0CB38 370 aaKnown RBP9.31□□□□□ -0.92
CPSF4-212ENST00000482251 IL32P24001 234 aa9.31□□□□□ -0.92
CPSF4-212ENST00000482251 PCYT1AP49585 367 aa9.31□□□□□ -0.92
CPSF4-212ENST00000482251 DIO1P49895 249 aa9.31□□□□□ -0.92
CPSF4-212ENST00000482251 KCNJ10P78508 379 aa9.31□□□□□ -0.92
CPSF4-212ENST00000482251 SYT14P1Q58G82 188 aa9.31□□□□□ -0.92
CPSF4-212ENST00000482251 Q5PR19 223 aa9.31□□□□□ -0.92
CPSF4-212ENST00000482251 GTF2IRD2BQ6EKJ0 949 aa9.31□□□□□ -0.92
CPSF4-212ENST00000482251 ATG4DQ86TL0 474 aaPredicted RBP9.31□□□□□ -0.92
CPSF4-212ENST00000482251 GTF2IRD2Q86UP8 949 aa9.31□□□□□ -0.92
CPSF4-212ENST00000482251 ARFGAP2Q8N6H7 521 aa9.31□□□□□ -0.92
CPSF4-212ENST00000482251 TRIML2Q8N7C3 387 aa9.31□□□□□ -0.92
CPSF4-212ENST00000482251 TMEM234Q8WY98 164 aa9.31□□□□□ -0.92
CPSF4-212ENST00000482251 ST8SIA1Q92185 356 aa9.31□□□□□ -0.92
CPSF4-212ENST00000482251 CNOT9Q92600 299 aaKnown RBP9.31□□□□□ -0.92
CPSF4-212ENST00000482251 AURKBQ96GD4 344 aaPredicted RBP9.31□□□□□ -0.92
CPSF4-212ENST00000482251 PLPPR2Q96GM1 343 aa9.31□□□□□ -0.92
CPSF4-212ENST00000482251 SMR3AQ99954 134 aa9.31□□□□□ -0.92
CPSF4-212ENST00000482251 PSD2Q9BQI7 771 aa9.31□□□□□ -0.92
CPSF4-212ENST00000482251 SLC38A1Q9H2H9 487 aa9.31□□□□□ -0.92
CPSF4-212ENST00000482251 GSX1Q9H4S2 264 aaPredicted RBP9.31□□□□□ -0.92
CPSF4-212ENST00000482251 POLE3Q9NRF9 147 aa9.31□□□□□ -0.92
CPSF4-212ENST00000482251 SERINC1Q9NRX5 453 aa9.31□□□□□ -0.92
CPSF4-212ENST00000482251 BEX4Q9NWD9 120 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms