RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 SYT4Q9H2B2 425 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 C1GALT1Q9NS00 363 aa13.38□□□□□ -0.27
COL20A1-206ENST00000479501 MRPL19P49406 292 aaKnown RBP13.37□□□□□ -0.27
COL20A1-206ENST00000479501 METAP1P53582 386 aa13.37□□□□□ -0.27
COL20A1-206ENST00000479501 VAMP2P63027 116 aa13.37□□□□□ -0.27
COL20A1-206ENST00000479501 KIAA0040Q15053 153 aa13.37□□□□□ -0.27
COL20A1-206ENST00000479501 POU4F3Q15319 338 aa13.37□□□□□ -0.27
COL20A1-206ENST00000479501 SF3A2Q15428 464 aaKnown RBP13.37□□□□□ -0.27
COL20A1-206ENST00000479501 ELSPBP1Q96BH3 223 aa13.37□□□□□ -0.27
COL20A1-206ENST00000479501 LPAR4Q99677 370 aa13.37□□□□□ -0.27
COL20A1-206ENST00000479501 TBC1D29Q9UFV1 150 aa13.37□□□□□ -0.27
COL20A1-206ENST00000479501 SUSD2Q9UGT4 822 aa13.37□□□□□ -0.27
COL20A1-206ENST00000479501 PLXNB2O15031 1838 aa13.37□□□□□ -0.27
COL20A1-206ENST00000479501 TIAL1Q01085 375 aaKnown RBP eCLIP13.37□□□□□ -0.27
COL20A1-206ENST00000479501 CBFBQ13951 182 aa13.37□□□□□ -0.27
COL20A1-206ENST00000479501 ERV3-1Q14264 604 aa13.37□□□□□ -0.27
COL20A1-206ENST00000479501 RHEBQ15382 184 aa13.37□□□□□ -0.27
COL20A1-206ENST00000479501 ATAD3CQ5T2N8 411 aa13.37□□□□□ -0.27
COL20A1-206ENST00000479501 KIAA0895LQ68EN5 471 aa13.37□□□□□ -0.27
COL20A1-206ENST00000479501 TMEM179BQ7Z7N9 219 aa13.37□□□□□ -0.27
COL20A1-206ENST00000479501 RBM45Q8IUH3 476 aaKnown RBP13.37□□□□□ -0.27
COL20A1-206ENST00000479501 LNX2Q8N448 690 aa13.37□□□□□ -0.27
COL20A1-206ENST00000479501 PNLDC1Q8NA58 520 aaKnown RBP13.37□□□□□ -0.27
COL20A1-206ENST00000479501 SLC7A13Q8TCU3 470 aa13.37□□□□□ -0.27
COL20A1-206ENST00000479501 TBC1D20Q96BZ9 403 aa13.37□□□□□ -0.27
COL20A1-206ENST00000479501 NTN4Q9HB63 628 aa13.37□□□□□ -0.27
COL20A1-206ENST00000479501 SLC6A13Q9NSD5 602 aa13.37□□□□□ -0.27
COL20A1-206ENST00000479501 RABL2AQ9UBK7 228 aaPredicted RBP13.37□□□□□ -0.27
COL20A1-206ENST00000479501 BOLA1Q9Y3E2 137 aa13.37□□□□□ -0.27
COL20A1-206ENST00000479501 TRAV27A0A087WT01 109 aa13.37□□□□□ -0.27
COL20A1-206ENST00000479501 TP53I11O14683 189 aa13.37□□□□□ -0.27
COL20A1-206ENST00000479501 PNMTP11086 282 aa13.37□□□□□ -0.27
COL20A1-206ENST00000479501 PRKXP51817 358 aa13.37□□□□□ -0.27
COL20A1-206ENST00000479501 SGCBQ16585 318 aa13.37□□□□□ -0.27
COL20A1-206ENST00000479501 SDR9C7Q8NEX9 313 aa13.37□□□□□ -0.27
COL20A1-206ENST00000479501 OR5W2Q8NH69 310 aa13.37□□□□□ -0.27
COL20A1-206ENST00000479501 MR1Q95460 341 aa13.37□□□□□ -0.27
COL20A1-206ENST00000479501 RARRES3Q9UL19 164 aa13.37□□□□□ -0.27
COL20A1-206ENST00000479501 UGT2A1Q9Y4X1 527 aa13.37□□□□□ -0.27
COL20A1-206ENST00000479501 FAM171A2A8MVW0 826 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 EGFP01133 1207 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 FAM189A2Q15884 450 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 TP53I3Q53FA7 332 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 TMEM164Q5U3C3 297 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 GLT8D1Q68CQ7 371 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 OR5M11Q96RB7 305 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 CLCC1Q96S66 551 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 OR51J1Q9H342 316 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 SPHK1Q9NYA1 384 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 MICAL3Q7RTP6 2002 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 A0A1W2PR48 441 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 LCMT2O60294 686 aaKnown RBP13.36□□□□□ -0.27
COL20A1-206ENST00000479501 TFP02787 698 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 GYPBP06028 91 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 PITPNBP48739 271 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 ALG10Q5BKT4 473 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 SLX4IPQ5VYV7 408 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 SAXO2Q658L1 398 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 LRFN4Q6PJG9 635 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 TMEM64Q6YI46 380 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 LRRC69Q6ZNQ3 347 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 OR5L2Q8NGL0 311 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 TMEM41AQ96HV5 264 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 PRR14Q9BWN1 585 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 DUSP21Q9H596 190 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 PCDHB16Q9NRJ7 776 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 PPP4R1LQ9P1A2 415 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 TESQ9UGI8 421 aaKnown RBP13.36□□□□□ -0.27
COL20A1-206ENST00000479501 SLC35A3Q9Y2D2 325 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 LOC102723532A0A0G2JNH3 316 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 PLGP00747 810 aaPredicted RBP13.36□□□□□ -0.27
COL20A1-206ENST00000479501 UGT2B10P36537 528 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 EPHA5P54756 1037 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 TMEM215Q68D42 235 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 MFSD12Q6NUT3 480 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 PRR22Q8IZ63 422 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 ZSCAN1Q8NBB4 408 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 ADOQ96SZ5 270 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 BABAM2Q9NXR7 383 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 PRKAR1BP31321 381 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 LIPAP38571 399 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 RAB38P57729 211 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 NKG7Q16617 165 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 ADPRMQ3LIE5 342 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 GXYLT1Q4G148 440 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 CADM3Q8N126 398 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 CNOT9Q92600 299 aaKnown RBP13.36□□□□□ -0.27
COL20A1-206ENST00000479501 MYADMQ96S97 322 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 CENPOQ9BU64 300 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 ASB4Q9Y574 426 aa13.36□□□□□ -0.27
COL20A1-206ENST00000479501 H0Y8X5 98 aa13.35□□□□□ -0.27
COL20A1-206ENST00000479501 TNFRSF10CO14798 259 aa13.35□□□□□ -0.27
COL20A1-206ENST00000479501 IL1AP01583 271 aa13.35□□□□□ -0.27
COL20A1-206ENST00000479501 SLC19A1P41440 591 aa13.35□□□□□ -0.27
COL20A1-206ENST00000479501 GALEQ14376 348 aa13.35□□□□□ -0.27
COL20A1-206ENST00000479501 TMEM184AQ6ZMB5 413 aa13.35□□□□□ -0.27
COL20A1-206ENST00000479501 MEPCEQ7L2J0 689 aaKnown RBP13.35□□□□□ -0.27
COL20A1-206ENST00000479501 SSX6Q7RTT6 188 aa13.35□□□□□ -0.27
COL20A1-206ENST00000479501 RNF113BQ8IZP6 322 aaKnown RBP13.35□□□□□ -0.27
COL20A1-206ENST00000479501 PBX4Q9BYU1 374 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms