RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 SH3GLB1Q9Y371 365 aa13.9□□□□□ -0.19
SEC13-215ENST00000477547 TMEM229AB2RXF0 380 aa13.89□□□□□ -0.19
SEC13-215ENST00000477547 SHISA8B8ZZ34 492 aa13.89□□□□□ -0.19
SEC13-215ENST00000477547 PRKCAP17252 672 aa13.89□□□□□ -0.19
SEC13-215ENST00000477547 ZNF136P52737 540 aa13.89□□□□□ -0.19
SEC13-215ENST00000477547 MLLT10P55197 1068 aa13.89□□□□□ -0.19
SEC13-215ENST00000477547 SELENOWP63302 87 aa13.89□□□□□ -0.19
SEC13-215ENST00000477547 HOXC5Q00444 222 aa13.89□□□□□ -0.19
SEC13-215ENST00000477547 MS4A2Q01362 244 aa13.89□□□□□ -0.19
SEC13-215ENST00000477547 TOMM34Q15785 309 aaPredicted RBP13.89□□□□□ -0.19
SEC13-215ENST00000477547 IFI44LQ53G44 452 aa13.89□□□□□ -0.19
SEC13-215ENST00000477547 ZNF324BQ6AW86 544 aaPredicted RBP13.89□□□□□ -0.19
SEC13-215ENST00000477547 ENPP6Q6UWR7 440 aa13.89□□□□□ -0.19
SEC13-215ENST00000477547 FKBP9P1Q75LS8 142 aa13.89□□□□□ -0.19
SEC13-215ENST00000477547 LACC1Q8IV20 430 aa13.89□□□□□ -0.19
SEC13-215ENST00000477547 FAM86B1Q8N7N1 296 aa13.89□□□□□ -0.19
SEC13-215ENST00000477547 CPT1CQ8TCG5 803 aa13.89□□□□□ -0.19
SEC13-215ENST00000477547 TMEM234Q8WY98 164 aa13.89□□□□□ -0.19
SEC13-215ENST00000477547 ST8SIA1Q92185 356 aa13.89□□□□□ -0.19
SEC13-215ENST00000477547 ZBTB8AQ96BR9 441 aa13.89□□□□□ -0.19
SEC13-215ENST00000477547 GPR137Q96N19 417 aa13.89□□□□□ -0.19
SEC13-215ENST00000477547 SFXN2Q96NB2 322 aa13.89□□□□□ -0.19
SEC13-215ENST00000477547 SLX1AQ9BQ83 275 aa13.89□□□□□ -0.19
SEC13-215ENST00000477547 LDAHQ9H6V9 325 aa13.89□□□□□ -0.19
SEC13-215ENST00000477547 POMPQ9Y244 141 aa13.89□□□□□ -0.19
SEC13-215ENST00000477547 CREBBPQ92793 2442 aa13.88□□□□□ -0.19
SEC13-215ENST00000477547 TRGV5A0A0B4J1U4 118 aa13.88□□□□□ -0.19
SEC13-215ENST00000477547 C7orf72A4D263 438 aa13.88□□□□□ -0.19
SEC13-215ENST00000477547 FAAHO00519 579 aa13.88□□□□□ -0.19
SEC13-215ENST00000477547 ACOT8O14734 319 aa13.88□□□□□ -0.19
SEC13-215ENST00000477547 CIB2O75838 187 aa13.88□□□□□ -0.19
SEC13-215ENST00000477547 PRKD3O94806 890 aa13.88□□□□□ -0.19
SEC13-215ENST00000477547 ZNF17P17021 662 aa13.88□□□□□ -0.19
SEC13-215ENST00000477547 HTR2AP28223 471 aa13.88□□□□□ -0.19
SEC13-215ENST00000477547 GCKP35557 465 aa13.88□□□□□ -0.19
SEC13-215ENST00000477547 ACAA2P42765 397 aaKnown RBP13.88□□□□□ -0.19
SEC13-215ENST00000477547 OR1E2P47887 323 aa13.88□□□□□ -0.19
SEC13-215ENST00000477547 IDH2P48735 452 aaKnown RBP13.88□□□□□ -0.19
SEC13-215ENST00000477547 TDGF1P3P51864 188 aa13.88□□□□□ -0.19
SEC13-215ENST00000477547 COPZ1P61923 177 aa13.88□□□□□ -0.19
SEC13-215ENST00000477547 TRAP1Q12931 704 aaKnown RBP13.88□□□□□ -0.19
SEC13-215ENST00000477547 SLC10A1Q14973 349 aa13.88□□□□□ -0.19
SEC13-215ENST00000477547 NPTX1Q15818 432 aa13.88□□□□□ -0.19
SEC13-215ENST00000477547 DEF8Q6ZN54 512 aa13.88□□□□□ -0.19
SEC13-215ENST00000477547 CADM2Q8N3J6 435 aa13.88□□□□□ -0.19
SEC13-215ENST00000477547 OR52E4Q8NGH9 312 aa13.88□□□□□ -0.19
SEC13-215ENST00000477547 OR4D11Q8NGI4 311 aa13.88□□□□□ -0.19
SEC13-215ENST00000477547 OR6T1Q8NGN1 323 aa13.88□□□□□ -0.19
SEC13-215ENST00000477547 OR5M1Q8NGP8 315 aa13.88□□□□□ -0.19
SEC13-215ENST00000477547 UTP4Q969X6 686 aaKnown RBP13.88□□□□□ -0.19
SEC13-215ENST00000477547 WFDC6Q9BQY6 131 aa13.88□□□□□ -0.19
SEC13-215ENST00000477547 ACKR4Q9NPB9 350 aa13.88□□□□□ -0.19
SEC13-215ENST00000477547 SPTBN1Q01082 2364 aaKnown RBP13.87□□□□□ -0.19
SEC13-215ENST00000477547 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.87□□□□□ -0.19
SEC13-215ENST00000477547 TCRBV5S2A0A599 114 aa13.87□□□□□ -0.19
SEC13-215ENST00000477547 ZIC3O60481 467 aa13.87□□□□□ -0.19
SEC13-215ENST00000477547 IGHG3P01860 377 aa13.87□□□□□ -0.19
SEC13-215ENST00000477547 IFNW1P05000 195 aa13.87□□□□□ -0.19
SEC13-215ENST00000477547 SESN3P58005 492 aa13.87□□□□□ -0.19
SEC13-215ENST00000477547 HSF1Q00613 529 aa13.87□□□□□ -0.19
SEC13-215ENST00000477547 C1orf146Q5VVC0 180 aa13.87□□□□□ -0.19
SEC13-215ENST00000477547 PLEKHM3Q6ZWE6 761 aa13.87□□□□□ -0.19
SEC13-215ENST00000477547 TRILQ7L0X0 811 aa13.87□□□□□ -0.19
SEC13-215ENST00000477547 GHDCQ8N2G8 530 aa13.87□□□□□ -0.19
SEC13-215ENST00000477547 GTPBP8Q8N3Z3 284 aaPredicted RBP13.87□□□□□ -0.19
SEC13-215ENST00000477547 NEIL3Q8TAT5 605 aa13.87□□□□□ -0.19
SEC13-215ENST00000477547 ZNF524Q96C55 264 aa13.87□□□□□ -0.19
SEC13-215ENST00000477547 MRGPRX4Q96LA9 322 aa13.87□□□□□ -0.19
SEC13-215ENST00000477547 MCHR1Q99705 422 aa13.87□□□□□ -0.19
SEC13-215ENST00000477547 NPAS1Q99742 590 aa13.87□□□□□ -0.19
SEC13-215ENST00000477547 ZNF559Q9BR84 538 aa13.87□□□□□ -0.19
SEC13-215ENST00000477547 PIGQQ9BRB3 760 aa13.87□□□□□ -0.19
SEC13-215ENST00000477547 CTPS2Q9NRF8 586 aa13.87□□□□□ -0.19
SEC13-215ENST00000477547 RPS6KB2Q9UBS0 482 aa13.87□□□□□ -0.19
SEC13-215ENST00000477547 SLC6A5Q9Y345 797 aa13.87□□□□□ -0.19
SEC13-215ENST00000477547 MRPS18CQ9Y3D5 142 aaKnown RBP13.87□□□□□ -0.19
SEC13-215ENST00000477547 ARHGAP21Q5T5U3 1957 aa13.86□□□□□ -0.19
SEC13-215ENST00000477547 OR2M5A3KFT3 312 aa13.86□□□□□ -0.19
SEC13-215ENST00000477547 CPSF4LA6NMK7 179 aaKnown RBP13.86□□□□□ -0.19
SEC13-215ENST00000477547 H3BML4 177 aa13.86□□□□□ -0.19
SEC13-215ENST00000477547 HCN1O60741 890 aa13.86□□□□□ -0.19
SEC13-215ENST00000477547 FMO6PO60774 539 aa13.86□□□□□ -0.19
SEC13-215ENST00000477547 WISP2O76076 250 aa13.86□□□□□ -0.19
SEC13-215ENST00000477547 ELK4P28324 431 aa13.86□□□□□ -0.19
SEC13-215ENST00000477547 EIF1P41567 113 aaKnown RBP13.86□□□□□ -0.19
SEC13-215ENST00000477547 B3GALT5-AS1P59052 145 aa13.86□□□□□ -0.19
SEC13-215ENST00000477547 MERTKQ12866 999 aa13.86□□□□□ -0.19
SEC13-215ENST00000477547 TMEM44Q2T9K0 475 aa13.86□□□□□ -0.19
SEC13-215ENST00000477547 GLYR1Q49A26 553 aaPredicted RBP13.86□□□□□ -0.19
SEC13-215ENST00000477547 WBP2NLQ6ICG8 309 aa13.86□□□□□ -0.19
SEC13-215ENST00000477547 POMZP3Q6PJE2 187 aa13.86□□□□□ -0.19
SEC13-215ENST00000477547 GRINAQ7Z429 371 aa13.86□□□□□ -0.19
SEC13-215ENST00000477547 SPATA24Q86W54 205 aa13.86□□□□□ -0.19
SEC13-215ENST00000477547 RBM45Q8IUH3 476 aaKnown RBP13.86□□□□□ -0.19
SEC13-215ENST00000477547 POC1BQ8TC44 478 aa13.86□□□□□ -0.19
SEC13-215ENST00000477547 SLC47A1Q96FL8 570 aa13.86□□□□□ -0.19
SEC13-215ENST00000477547 RAB3IPQ96QF0 476 aaPredicted RBP13.86□□□□□ -0.19
SEC13-215ENST00000477547 BARD1Q99728 777 aaKnown RBP13.86□□□□□ -0.19
SEC13-215ENST00000477547 TRIM2Q9C040 744 aa13.86□□□□□ -0.19
SEC13-215ENST00000477547 PLSCR2Q9NRY7 297 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms