RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 CAPGP40121 348 aa18.58■□□□□ 0.56
CDHR3-210ENST00000474330 PTGDSP41222 190 aa18.58■□□□□ 0.56
CDHR3-210ENST00000474330 CASP3P42574 277 aa18.58■□□□□ 0.56
CDHR3-210ENST00000474330 CCR4P51679 360 aa18.58■□□□□ 0.56
CDHR3-210ENST00000474330 RPP38P78345 283 aaKnown RBP18.58■□□□□ 0.56
CDHR3-210ENST00000474330 KCNAB2Q13303 367 aa18.58■□□□□ 0.56
CDHR3-210ENST00000474330 CRTC2Q53ET0 693 aaPredicted RBP18.58■□□□□ 0.56
CDHR3-210ENST00000474330 SOWAHCQ53LP3 525 aaPredicted RBP18.58■□□□□ 0.56
CDHR3-210ENST00000474330 ALG10BQ5I7T1 473 aa18.58■□□□□ 0.56
CDHR3-210ENST00000474330 ACER2Q5QJU3 275 aa18.58■□□□□ 0.56
CDHR3-210ENST00000474330 SWT1Q5T5J6 900 aaKnown RBP18.58■□□□□ 0.56
CDHR3-210ENST00000474330 B3GNTL1Q67FW5 361 aaPredicted RBP18.58■□□□□ 0.56
CDHR3-210ENST00000474330 WBP2NLQ6ICG8 309 aa18.58■□□□□ 0.56
CDHR3-210ENST00000474330 C1orf94Q6P1W5 598 aa18.58■□□□□ 0.56
CDHR3-210ENST00000474330 RRM2BQ7LG56 351 aa18.58■□□□□ 0.56
CDHR3-210ENST00000474330 RNF113BQ8IZP6 322 aaKnown RBP18.58■□□□□ 0.56
CDHR3-210ENST00000474330 OR5W2Q8NH69 310 aa18.58■□□□□ 0.56
CDHR3-210ENST00000474330 DNAJA4Q8WW22 397 aaPredicted RBP18.58■□□□□ 0.56
CDHR3-210ENST00000474330 THAP4Q8WY91 577 aa18.58■□□□□ 0.56
CDHR3-210ENST00000474330 SH3YL1Q96HL8 342 aaPredicted RBP18.58■□□□□ 0.56
CDHR3-210ENST00000474330 MPP4Q96JB8 637 aa18.58■□□□□ 0.56
CDHR3-210ENST00000474330 DGCR6LQ9BY27 220 aa18.58■□□□□ 0.56
CDHR3-210ENST00000474330 METTL7AQ9H8H3 244 aa18.58■□□□□ 0.56
CDHR3-210ENST00000474330 PAPOLBQ9NRJ5 636 aaKnown RBP18.58■□□□□ 0.56
CDHR3-210ENST00000474330 SDHAF3Q9NRP4 125 aa18.58■□□□□ 0.56
CDHR3-210ENST00000474330 FAM118AQ9NWS6 357 aa18.58■□□□□ 0.56
CDHR3-210ENST00000474330 KLRF1Q9NZS2 232 aa18.58■□□□□ 0.56
CDHR3-210ENST00000474330 BOD1L1Q8NFC6 3051 aa18.58■□□□□ 0.56
CDHR3-210ENST00000474330 MED13Q9UHV7 2174 aa18.58■□□□□ 0.56
CDHR3-210ENST00000474330 PCNX3Q9H6A9 2034 aa18.58■□□□□ 0.56
CDHR3-210ENST00000474330 IDH2P48735 452 aaKnown RBP18.57■□□□□ 0.56
CDHR3-210ENST00000474330 LSM11P83369 360 aaKnown RBP eCLIP18.57■□□□□ 0.56
CDHR3-210ENST00000474330 IL1RL1Q01638 556 aa18.57■□□□□ 0.56
CDHR3-210ENST00000474330 SNTA1Q13424 505 aa18.57■□□□□ 0.56
CDHR3-210ENST00000474330 PCSK4Q6UW60 755 aa18.57■□□□□ 0.56
CDHR3-210ENST00000474330 LINC00114Q6XXX2 140 aa18.57■□□□□ 0.56
CDHR3-210ENST00000474330 WDR88Q6ZMY6 472 aa18.57■□□□□ 0.56
CDHR3-210ENST00000474330 MBOAT2Q6ZWT7 520 aa18.57■□□□□ 0.56
CDHR3-210ENST00000474330 ZER1Q7Z7L7 766 aa18.57■□□□□ 0.56
CDHR3-210ENST00000474330 CLEC1AQ8NC01 280 aa18.57■□□□□ 0.56
CDHR3-210ENST00000474330 B4GALNT2Q8NHY0 566 aa18.57■□□□□ 0.56
CDHR3-210ENST00000474330 TMEM255BQ8WV15 326 aa18.57■□□□□ 0.56
CDHR3-210ENST00000474330 CYGBQ8WWM9 190 aa18.57■□□□□ 0.56
CDHR3-210ENST00000474330 HS6ST2Q96MM7 605 aa18.57■□□□□ 0.56
CDHR3-210ENST00000474330 ANKRD60Q9BZ19 345 aa18.57■□□□□ 0.56
CDHR3-210ENST00000474330 LHPPQ9H008 270 aa18.57■□□□□ 0.56
CDHR3-210ENST00000474330 HPF1Q9NWY4 346 aa18.57■□□□□ 0.56
CDHR3-210ENST00000474330 BSNQ9UPA5 3926 aa18.57■□□□□ 0.56
CDHR3-210ENST00000474330 C17orf51A8MQB3 221 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 ZNF891A8MT65 544 aaPredicted RBP18.56■□□□□ 0.56
CDHR3-210ENST00000474330 NKX2-8O15522 239 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 POU2F1P14859 743 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 PGCP20142 388 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 UGT2B15P54855 530 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 CBFBQ13951 182 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 ATP1A1-AS1Q5TC04 95 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 TTC23Q5W5X9 447 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 PRICKLE2Q7Z3G6 844 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 CHERPQ8IWX8 916 aaKnown RBP18.56■□□□□ 0.56
CDHR3-210ENST00000474330 PARP8Q8N3A8 854 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 MARVELD2Q8N4S9 558 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 PAQR8Q8TEZ7 354 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 TMEM239Q8WW34 195 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 GTPBP3Q969Y2 492 aaKnown RBP18.56■□□□□ 0.56
CDHR3-210ENST00000474330 ZNF570Q96NI8 536 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 ZNF426Q9BUY5 554 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 GABARAPL3Q9BY60 117 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 HHATLQ9HCP6 504 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 GALNT9Q9HCQ5 603 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 SH2D2AQ9NP31 389 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 SELENONQ9NZV5 590 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 TEKT2Q9UIF3 430 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 EML6Q6ZMW3 1958 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 CACNA1GO43497 2377 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 SLC16A6O15403 523 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 NTN1O95631 604 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 PRKAR1AP10644 381 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 POLR2IP36954 125 aaKnown RBP18.56■□□□□ 0.56
CDHR3-210ENST00000474330 RBM34P42696 430 aaKnown RBP18.56■□□□□ 0.56
CDHR3-210ENST00000474330 OMPP47874 163 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 SUMO3P55854 103 aaPredicted RBP18.56■□□□□ 0.56
CDHR3-210ENST00000474330 BICRALQ6AI39 1079 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 CD300LDQ6UXZ3 194 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 GPALPP1Q8IXQ4 340 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 ZNF555Q8NEP9 628 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 ZNF563Q8TA94 476 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 PIGXQ8TBF5 258 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 RNF217Q8TC41 542 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 C3orf49Q96BT1 292 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 SGCZQ96LD1 299 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 KLHDC3Q9BQ90 382 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 GRIP2Q9C0E4 1043 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 ENOPH1Q9UHY7 261 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 WIF1Q9Y5W5 379 aa18.56■□□□□ 0.56
CDHR3-210ENST00000474330 IGLV3-32A0A0A0MS00 114 aa18.55■□□□□ 0.56
CDHR3-210ENST00000474330 C2orf72A6NCS6 295 aa18.55■□□□□ 0.56
CDHR3-210ENST00000474330 ITGA3P26006 1051 aa18.55■□□□□ 0.56
CDHR3-210ENST00000474330 MSX1P28360 303 aa18.55■□□□□ 0.56
CDHR3-210ENST00000474330 SLC1A3P43003 542 aa18.55■□□□□ 0.56
CDHR3-210ENST00000474330 ST13P50502 369 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms