RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 IL2RGP31785 369 aa11.05□□□□□ -0.64
TRAF4-209ENST00000473421 NR4A2P43354 598 aa11.05□□□□□ -0.64
TRAF4-209ENST00000473421 SERPINB4P48594 390 aa11.05□□□□□ -0.64
TRAF4-209ENST00000473421 DIO1P49895 249 aa11.05□□□□□ -0.64
TRAF4-209ENST00000473421 GABRA6Q16445 453 aa11.05□□□□□ -0.64
TRAF4-209ENST00000473421 SWI5Q1ZZU3 235 aa11.05□□□□□ -0.64
TRAF4-209ENST00000473421 TIGD2Q4W5G0 525 aa11.05□□□□□ -0.64
TRAF4-209ENST00000473421 ARL13AQ5H913 290 aaPredicted RBP11.05□□□□□ -0.64
TRAF4-209ENST00000473421 FBXW9Q5XUX1 488 aa11.05□□□□□ -0.64
TRAF4-209ENST00000473421 FAM166AQ6J272 317 aa11.05□□□□□ -0.64
TRAF4-209ENST00000473421 SYT10Q6XYQ8 523 aa11.05□□□□□ -0.64
TRAF4-209ENST00000473421 GALNT5Q7Z7M9 940 aa11.05□□□□□ -0.64
TRAF4-209ENST00000473421 P2RY8Q86VZ1 359 aa11.05□□□□□ -0.64
TRAF4-209ENST00000473421 SLC22A9Q8IVM8 553 aa11.05□□□□□ -0.64
TRAF4-209ENST00000473421 CCDC103Q8IW40 242 aa11.05□□□□□ -0.64
TRAF4-209ENST00000473421 UBE2J2Q8N2K1 259 aa11.05□□□□□ -0.64
TRAF4-209ENST00000473421 ZNF614Q8N883 585 aa11.05□□□□□ -0.64
TRAF4-209ENST00000473421 ANKS4BQ8N8V4 417 aa11.05□□□□□ -0.64
TRAF4-209ENST00000473421 OR7A2PQ8NGA2 310 aa11.05□□□□□ -0.64
TRAF4-209ENST00000473421 MZB1Q8WU39 189 aa11.05□□□□□ -0.64
TRAF4-209ENST00000473421 CHMP6Q96FZ7 201 aa11.05□□□□□ -0.64
TRAF4-209ENST00000473421 USB1Q9BQ65 265 aaKnown RBP11.05□□□□□ -0.64
TRAF4-209ENST00000473421 PIGUQ9H490 435 aa11.05□□□□□ -0.64
TRAF4-209ENST00000473421 ZCCHC3Q9NUD5 404 aaKnown RBP11.05□□□□□ -0.64
TRAF4-209ENST00000473421 GPATCH2Q9NW75 528 aa11.05□□□□□ -0.64
TRAF4-209ENST00000473421 KCNS2Q9ULS6 477 aa11.05□□□□□ -0.64
TRAF4-209ENST00000473421 WBP11Q9Y2W2 641 aaKnown RBP11.05□□□□□ -0.64
TRAF4-209ENST00000473421 ATP23Q9Y6H3 246 aa11.05□□□□□ -0.64
TRAF4-209ENST00000473421 DYSFO75923 2080 aa11.04□□□□□ -0.64
TRAF4-209ENST00000473421 IGKV3D-15A0A087WSY6 115 aa11.04□□□□□ -0.64
TRAF4-209ENST00000473421 A0A1W2PPM1 405 aa11.04□□□□□ -0.64
TRAF4-209ENST00000473421 CIB4A0PJX0 185 aa11.04□□□□□ -0.64
TRAF4-209ENST00000473421 LRP5LA4QPB2 252 aa11.04□□□□□ -0.64
TRAF4-209ENST00000473421 CCT8L1PA6NM43 557 aa11.04□□□□□ -0.64
TRAF4-209ENST00000473421 GJE1A6NN92 205 aa11.04□□□□□ -0.64
TRAF4-209ENST00000473421 GTPBP1O00178 669 aaKnown RBP11.04□□□□□ -0.64
TRAF4-209ENST00000473421 KCNAB3O43448 404 aa11.04□□□□□ -0.64
TRAF4-209ENST00000473421 TBX19O60806 448 aa11.04□□□□□ -0.64
TRAF4-209ENST00000473421 LAMP1P11279 417 aa11.04□□□□□ -0.64
TRAF4-209ENST00000473421 PRPH2P23942 346 aa11.04□□□□□ -0.64
TRAF4-209ENST00000473421 PTAFRP25105 342 aa11.04□□□□□ -0.64
TRAF4-209ENST00000473421 LCN1P31025 176 aa11.04□□□□□ -0.64
TRAF4-209ENST00000473421 CASQ1P31415 396 aa11.04□□□□□ -0.64
TRAF4-209ENST00000473421 GZMKP49863 264 aa11.04□□□□□ -0.64
TRAF4-209ENST00000473421 ATP12AP54707 1039 aa11.04□□□□□ -0.64
TRAF4-209ENST00000473421 SESN3P58005 492 aa11.04□□□□□ -0.64
TRAF4-209ENST00000473421 RPS26P62854 115 aaKnown RBP11.04□□□□□ -0.64
TRAF4-209ENST00000473421 SELENBP1Q13228 472 aa11.04□□□□□ -0.64
TRAF4-209ENST00000473421 DCST2Q5T1A1 773 aa11.04□□□□□ -0.64
TRAF4-209ENST00000473421 ABLIM2Q6H8Q1 611 aa11.04□□□□□ -0.64
TRAF4-209ENST00000473421 C8orf74Q6P047 294 aa11.04□□□□□ -0.64
TRAF4-209ENST00000473421 FRMD7Q6ZUT3 714 aa11.04□□□□□ -0.64
TRAF4-209ENST00000473421 MTERF4Q7Z6M4 381 aaKnown RBP11.04□□□□□ -0.64
TRAF4-209ENST00000473421 CLEC4FQ8N1N0 589 aa11.04□□□□□ -0.64
TRAF4-209ENST00000473421 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.04□□□□□ -0.64
TRAF4-209ENST00000473421 NOA1Q8NC60 698 aaKnown RBP11.04□□□□□ -0.64
TRAF4-209ENST00000473421 OR5D16Q8NGK9 328 aa11.04□□□□□ -0.64
TRAF4-209ENST00000473421 OR5W2Q8NH69 310 aa11.04□□□□□ -0.64
TRAF4-209ENST00000473421 IFT81Q8WYA0 676 aa11.04□□□□□ -0.64
TRAF4-209ENST00000473421 FBXO17Q96EF6 278 aa11.04□□□□□ -0.64
TRAF4-209ENST00000473421 ZNF764Q96H86 408 aaPredicted RBP11.04□□□□□ -0.64
TRAF4-209ENST00000473421 RADILQ96JH8 1075 aa11.04□□□□□ -0.64
TRAF4-209ENST00000473421 ARL5BQ96KC2 179 aa11.04□□□□□ -0.64
TRAF4-209ENST00000473421 MUS81Q96NY9 551 aa11.04□□□□□ -0.64
TRAF4-209ENST00000473421 CCT7Q99832 543 aa11.04□□□□□ -0.64
TRAF4-209ENST00000473421 THUMPD3Q9BV44 507 aaKnown RBP11.04□□□□□ -0.64
TRAF4-209ENST00000473421 SERHL2Q9H4I8 314 aa11.04□□□□□ -0.64
TRAF4-209ENST00000473421 RRAGDQ9NQL2 400 aaPredicted RBP11.04□□□□□ -0.64
TRAF4-209ENST00000473421 DUSP22Q9NRW4 184 aa11.04□□□□□ -0.64
TRAF4-209ENST00000473421 ACSS1Q9NUB1 689 aaPredicted RBP11.04□□□□□ -0.64
TRAF4-209ENST00000473421 C1orf109Q9NX04 203 aa11.04□□□□□ -0.64
TRAF4-209ENST00000473421 MEGF8Q7Z7M0 2845 aa11.03□□□□□ -0.64
TRAF4-209ENST00000473421 EXOC1LA0A1B0GW35 172 aa11.03□□□□□ -0.64
TRAF4-209ENST00000473421 CCDC151A5D8V7 595 aa11.03□□□□□ -0.64
TRAF4-209ENST00000473421 KIF2AO00139 706 aaPredicted RBP11.03□□□□□ -0.64
TRAF4-209ENST00000473421 PDLIM1O00151 329 aa11.03□□□□□ -0.64
TRAF4-209ENST00000473421 FCMRO60667 390 aa11.03□□□□□ -0.64
TRAF4-209ENST00000473421 DNAJA2O60884 412 aa11.03□□□□□ -0.64
TRAF4-209ENST00000473421 TGFAP01135 160 aa11.03□□□□□ -0.64
TRAF4-209ENST00000473421 LINC00032P0C843 101 aa11.03□□□□□ -0.64
TRAF4-209ENST00000473421 APEHP13798 732 aaKnown RBP11.03□□□□□ -0.64
TRAF4-209ENST00000473421 ITGA2P17301 1181 aa11.03□□□□□ -0.64
TRAF4-209ENST00000473421 CCR4P51679 360 aa11.03□□□□□ -0.64
TRAF4-209ENST00000473421 SUMO3P55854 103 aaPredicted RBP11.03□□□□□ -0.64
TRAF4-209ENST00000473421 PLAURQ03405 335 aa11.03□□□□□ -0.64
TRAF4-209ENST00000473421 SKP2Q13309 424 aa11.03□□□□□ -0.64
TRAF4-209ENST00000473421 CR1LQ2VPA4 569 aa11.03□□□□□ -0.64
TRAF4-209ENST00000473421 PDZK1Q5T2W1 519 aa11.03□□□□□ -0.64
TRAF4-209ENST00000473421 ZNF544Q6NX49 715 aa11.03□□□□□ -0.64
TRAF4-209ENST00000473421 ZCCHC12Q6PEW1 402 aa11.03□□□□□ -0.64
TRAF4-209ENST00000473421 ZYG11AQ6WRX3 759 aa11.03□□□□□ -0.64
TRAF4-209ENST00000473421 TMPPEQ6ZT21 453 aa11.03□□□□□ -0.64
TRAF4-209ENST00000473421 HMGN2P46Q86SG4 172 aa11.03□□□□□ -0.64
TRAF4-209ENST00000473421 TMCO5AQ8N6Q1 288 aa11.03□□□□□ -0.64
TRAF4-209ENST00000473421 ZFP28Q8NHY6 868 aa11.03□□□□□ -0.64
TRAF4-209ENST00000473421 STACQ99469 402 aa11.03□□□□□ -0.64
TRAF4-209ENST00000473421 OR11A1Q9GZK7 315 aa11.03□□□□□ -0.64
TRAF4-209ENST00000473421 GRPEL1Q9HAV7 217 aa11.03□□□□□ -0.64
TRAF4-209ENST00000473421 MOKQ9UQ07 419 aa11.03□□□□□ -0.64
TRAF4-209ENST00000473421 MGAT4BQ9UQ53 548 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms