RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, human

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGCE-210	ENST00000472326	WARS2	Q9UGM6	360 aa	Known RBP	4.16	□□□□□ -1.74
SGCE-210	ENST00000472326	ZNF225	Q9UK10	706 aa		4.16	□□□□□ -1.74
SGCE-210	ENST00000472326	RAB26	Q9ULW5	256 aa		4.16	□□□□□ -1.74
SGCE-210	ENST00000472326	RIMBP3C	A6NJZ7	1639 aa		4.15	□□□□□ -1.74
SGCE-210	ENST00000472326	RIMBP3B	A6NNM3	1639 aa		4.15	□□□□□ -1.74
SGCE-210	ENST00000472326	RIMBP3	Q9UFD9	1639 aa		4.15	□□□□□ -1.74
SGCE-210	ENST00000472326		A6NDX4	124 aa		4.15	□□□□□ -1.75
SGCE-210	ENST00000472326	CHAD	O15335	359 aa		4.15	□□□□□ -1.75
SGCE-210	ENST00000472326	ZNF780A	O75290	641 aa	Predicted RBP	4.15	□□□□□ -1.75
SGCE-210	ENST00000472326	SNAPIN	O95295	136 aa		4.15	□□□□□ -1.75
SGCE-210	ENST00000472326	GNA14	O95837	355 aa		4.15	□□□□□ -1.75
SGCE-210	ENST00000472326	RNH1	P13489	461 aa	Known RBP	4.15	□□□□□ -1.75
SGCE-210	ENST00000472326	RCC1	P18754	421 aa	Predicted RBP	4.15	□□□□□ -1.75
SGCE-210	ENST00000472326	CD80	P33681	288 aa		4.15	□□□□□ -1.75
SGCE-210	ENST00000472326	PRPS1	P60891	318 aa		4.15	□□□□□ -1.75
SGCE-210	ENST00000472326	EWSR1	Q01844	656 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
SGCE-210	ENST00000472326	CCDC173	Q0VFZ6	552 aa		4.15	□□□□□ -1.75
SGCE-210	ENST00000472326		Q8N9W7	124 aa		4.15	□□□□□ -1.75
SGCE-210	ENST00000472326	FICD	Q9BVA6	458 aa		4.15	□□□□□ -1.75
SGCE-210	ENST00000472326	CALHM2	Q9HA72	323 aa		4.15	□□□□□ -1.75
SGCE-210	ENST00000472326	GJE1	A6NN92	205 aa		4.14	□□□□□ -1.75
SGCE-210	ENST00000472326	FAM166B	A8MTA8	275 aa		4.14	□□□□□ -1.75
SGCE-210	ENST00000472326	SCGB2A1	O75556	95 aa		4.14	□□□□□ -1.75
SGCE-210	ENST00000472326	LALBA	P00709	142 aa		4.14	□□□□□ -1.75
SGCE-210	ENST00000472326	CA1	P00915	261 aa	Predicted RBP	4.14	□□□□□ -1.75
SGCE-210	ENST00000472326	ARF4	P18085	180 aa	Predicted RBP	4.14	□□□□□ -1.75
SGCE-210	ENST00000472326	IL10	P22301	178 aa		4.14	□□□□□ -1.75
SGCE-210	ENST00000472326	COX7A1	P24310	79 aa		4.14	□□□□□ -1.75
SGCE-210	ENST00000472326	NUCB2	P80303	420 aa		4.14	□□□□□ -1.75
SGCE-210	ENST00000472326	ARFRP1	Q13795	201 aa		4.14	□□□□□ -1.75
SGCE-210	ENST00000472326	CBLN3	Q6UW01	205 aa		4.14	□□□□□ -1.75
SGCE-210	ENST00000472326	C16orf62	Q7Z3J2	963 aa		4.14	□□□□□ -1.75
SGCE-210	ENST00000472326	ZNF786	Q8N393	782 aa		4.14	□□□□□ -1.75
SGCE-210	ENST00000472326	FAM71E2	Q8N5Q1	922 aa		4.14	□□□□□ -1.75
SGCE-210	ENST00000472326	MARCH1	Q8TCQ1	289 aa		4.14	□□□□□ -1.75
SGCE-210	ENST00000472326	RAB7B	Q96AH8	199 aa		4.14	□□□□□ -1.75
SGCE-210	ENST00000472326	STARD4	Q96DR4	205 aa		4.14	□□□□□ -1.75
SGCE-210	ENST00000472326	SLC6A7	Q99884	636 aa		4.14	□□□□□ -1.75
SGCE-210	ENST00000472326	GAL3ST1	Q99999	423 aa		4.14	□□□□□ -1.75
SGCE-210	ENST00000472326	C1orf21	Q9H246	121 aa		4.14	□□□□□ -1.75
SGCE-210	ENST00000472326	PATZ1	Q9HBE1	687 aa	Known RBP	4.14	□□□□□ -1.75
SGCE-210	ENST00000472326	AIG1	Q9NVV5	245 aa		4.14	□□□□□ -1.75
SGCE-210	ENST00000472326	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	4.14	□□□□□ -1.75
SGCE-210	ENST00000472326	CARMIL1	Q5VZK9	1371 aa		4.14	□□□□□ -1.75
SGCE-210	ENST00000472326	VSTM2B	A6NLU5	285 aa		4.13	□□□□□ -1.75
SGCE-210	ENST00000472326	CYP2F1	P24903	491 aa		4.13	□□□□□ -1.75
SGCE-210	ENST00000472326	BID	P55957	195 aa		4.13	□□□□□ -1.75
SGCE-210	ENST00000472326	CHRNB3	Q05901	458 aa		4.13	□□□□□ -1.75
SGCE-210	ENST00000472326	GPNMB	Q14956	572 aa		4.13	□□□□□ -1.75
SGCE-210	ENST00000472326	LRRC8B	Q6P9F7	803 aa		4.13	□□□□□ -1.75
SGCE-210	ENST00000472326	UNC5D	Q6UXZ4	953 aa		4.13	□□□□□ -1.75
SGCE-210	ENST00000472326	OR5L2	Q8NGL0	311 aa		4.13	□□□□□ -1.75
SGCE-210	ENST00000472326	PNPT1	Q8TCS8	783 aa	Known RBP	4.13	□□□□□ -1.75
SGCE-210	ENST00000472326	BLOC1S5	Q8TDH9	187 aa		4.13	□□□□□ -1.75
SGCE-210	ENST00000472326	TBX15	Q96SF7	602 aa		4.13	□□□□□ -1.75
SGCE-210	ENST00000472326	MRPL13	Q9BYD1	178 aa	Known RBP	4.13	□□□□□ -1.75
SGCE-210	ENST00000472326	MTRF1L	Q9UGC7	380 aa	Known RBP	4.13	□□□□□ -1.75
SGCE-210	ENST00000472326	SLCO1B1	Q9Y6L6	691 aa		4.13	□□□□□ -1.75
SGCE-210	ENST00000472326	ANKRD63	C9JTQ0	380 aa		4.12	□□□□□ -1.75
SGCE-210	ENST00000472326	GFY	I3L273	518 aa		4.12	□□□□□ -1.75
SGCE-210	ENST00000472326	PRPSAP2	O60256	369 aa		4.12	□□□□□ -1.75
SGCE-210	ENST00000472326	ECI2	O75521	394 aa		4.12	□□□□□ -1.75
SGCE-210	ENST00000472326	MMP1	P03956	469 aa		4.12	□□□□□ -1.75
SGCE-210	ENST00000472326	CYP2B6	P20813	491 aa		4.12	□□□□□ -1.75
SGCE-210	ENST00000472326	CCND2	P30279	289 aa		4.12	□□□□□ -1.75
SGCE-210	ENST00000472326	HTR1F	P30939	366 aa		4.12	□□□□□ -1.75
SGCE-210	ENST00000472326	PLK1	P53350	603 aa		4.12	□□□□□ -1.75
SGCE-210	ENST00000472326	MAP2K1	Q02750	393 aa	Predicted RBP	4.12	□□□□□ -1.75
SGCE-210	ENST00000472326	PARP10	Q53GL7	1025 aa		4.12	□□□□□ -1.75
SGCE-210	ENST00000472326	ATL3	Q6DD88	541 aa		4.12	□□□□□ -1.75
SGCE-210	ENST00000472326	KIAA1328	Q86T90	577 aa		4.12	□□□□□ -1.75
SGCE-210	ENST00000472326	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.12	□□□□□ -1.75
SGCE-210	ENST00000472326	UCN3	Q969E3	161 aa		4.12	□□□□□ -1.75
SGCE-210	ENST00000472326	MYLPF	Q96A32	169 aa		4.12	□□□□□ -1.75
SGCE-210	ENST00000472326	CHRDL1	Q9BU40	450 aa		4.12	□□□□□ -1.75
SGCE-210	ENST00000472326	TREM2	Q9NZC2	230 aa		4.12	□□□□□ -1.75
SGCE-210	ENST00000472326	PRPF19	Q9UMS4	504 aa	Known RBP	4.12	□□□□□ -1.75
SGCE-210	ENST00000472326	CHMP2B	Q9UQN3	213 aa		4.12	□□□□□ -1.75
SGCE-210	ENST00000472326	THOC2	Q8NI27	1593 aa	Known RBP	4.11	□□□□□ -1.75
SGCE-210	ENST00000472326	PPIAL4C	A0A0B4J2A2	164 aa		4.11	□□□□□ -1.75
SGCE-210	ENST00000472326	IGHV2-70D	A0A0C4DH43	119 aa		4.11	□□□□□ -1.75
SGCE-210	ENST00000472326		A0A1B0GUL7	405 aa		4.11	□□□□□ -1.75
SGCE-210	ENST00000472326	PRKY	O43930	277 aa		4.11	□□□□□ -1.75
SGCE-210	ENST00000472326	ALOX5	P09917	674 aa		4.11	□□□□□ -1.75
SGCE-210	ENST00000472326	RBMY1C	P0DJD4	496 aa		4.11	□□□□□ -1.75
SGCE-210	ENST00000472326	PPIAL4G	P0DN37	164 aa		4.11	□□□□□ -1.75
SGCE-210	ENST00000472326	PRKX	P51817	358 aa		4.11	□□□□□ -1.75
SGCE-210	ENST00000472326	LINC00315	P59091	139 aa		4.11	□□□□□ -1.75
SGCE-210	ENST00000472326	C1orf146	Q5VVC0	180 aa		4.11	□□□□□ -1.75
SGCE-210	ENST00000472326	ACOT7L	Q6ZUV0	252 aa		4.11	□□□□□ -1.75
SGCE-210	ENST00000472326	DENND6B	Q8NEG7	585 aa		4.11	□□□□□ -1.75
SGCE-210	ENST00000472326	OR56B4	Q8NH76	319 aa		4.11	□□□□□ -1.75
SGCE-210	ENST00000472326	SPATA16	Q9BXB7	569 aa		4.11	□□□□□ -1.75
SGCE-210	ENST00000472326	NAT10	Q9H0A0	1025 aa	Known RBP	4.11	□□□□□ -1.75
SGCE-210	ENST00000472326	ZNF385D	Q9H6B1	395 aa		4.11	□□□□□ -1.75
SGCE-210	ENST00000472326	HOOK1	Q9UJC3	728 aa	Known RBP	4.11	□□□□□ -1.75
SGCE-210	ENST00000472326	NEUROG3	Q9Y4Z2	214 aa		4.11	□□□□□ -1.75
SGCE-210	ENST00000472326	ALG6	Q9Y672	507 aa		4.11	□□□□□ -1.75
SGCE-210	ENST00000472326	HELT	A6NFD8	242 aa		4.1	□□□□□ -1.75
SGCE-210	ENST00000472326		F8WDY8	70 aa		4.1	□□□□□ -1.75

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