RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 MAGEA12P43365 314 aa16.61■□□□□ 0.25
NCKIPSD-209ENST00000470006 SUMO3P55854 103 aaPredicted RBP16.61■□□□□ 0.25
NCKIPSD-209ENST00000470006 C2orf54Q08AI8 447 aa16.61■□□□□ 0.25
NCKIPSD-209ENST00000470006 GABRA6Q16445 453 aa16.61■□□□□ 0.25
NCKIPSD-209ENST00000470006 IKBIPQ70UQ0 350 aa16.61■□□□□ 0.25
NCKIPSD-209ENST00000470006 GCDHQ92947 438 aaPredicted RBP16.61■□□□□ 0.25
NCKIPSD-209ENST00000470006 TMEM237Q96Q45 408 aa16.61■□□□□ 0.25
NCKIPSD-209ENST00000470006 BTBD2Q9BX70 525 aa16.61■□□□□ 0.25
NCKIPSD-209ENST00000470006 RAB17Q9H0T7 212 aa16.61■□□□□ 0.25
NCKIPSD-209ENST00000470006 ICAM5Q9UMF0 924 aa16.61■□□□□ 0.25
NCKIPSD-209ENST00000470006 ACTL7BQ9Y614 415 aa16.61■□□□□ 0.25
NCKIPSD-209ENST00000470006 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.6■□□□□ 0.25
NCKIPSD-209ENST00000470006 SULT2B1O00204 365 aa16.6■□□□□ 0.25
NCKIPSD-209ENST00000470006 CREB1P16220 341 aa16.6■□□□□ 0.25
NCKIPSD-209ENST00000470006 APEX1P27695 318 aaKnown RBP16.6■□□□□ 0.25
NCKIPSD-209ENST00000470006 CHN2P52757 468 aa16.6■□□□□ 0.25
NCKIPSD-209ENST00000470006 PKNOX1P55347 436 aa16.6■□□□□ 0.25
NCKIPSD-209ENST00000470006 SWI5Q1ZZU3 235 aa16.6■□□□□ 0.25
NCKIPSD-209ENST00000470006 MST1LQ2TV78 715 aa16.6■□□□□ 0.25
NCKIPSD-209ENST00000470006 NOXRED1Q6NXP6 359 aa16.6■□□□□ 0.25
NCKIPSD-209ENST00000470006 C3orf33Q6P1S2 294 aa16.6■□□□□ 0.25
NCKIPSD-209ENST00000470006 ZDHHC24Q6UX98 284 aa16.6■□□□□ 0.25
NCKIPSD-209ENST00000470006 LINC01356Q8N9X3 169 aa16.6■□□□□ 0.25
NCKIPSD-209ENST00000470006 GIMAP5Q96F15 307 aa16.6■□□□□ 0.25
NCKIPSD-209ENST00000470006 HOXD1Q9GZZ0 328 aa16.6■□□□□ 0.25
NCKIPSD-209ENST00000470006 ACSS3Q9H6R3 686 aa16.6■□□□□ 0.25
NCKIPSD-209ENST00000470006 SH3BP4Q9P0V3 963 aa16.6■□□□□ 0.25
NCKIPSD-209ENST00000470006 MOKQ9UQ07 419 aa16.6■□□□□ 0.25
NCKIPSD-209ENST00000470006 AKAP10O43572 662 aa16.59■□□□□ 0.25
NCKIPSD-209ENST00000470006 MRPL33O75394 65 aaKnown RBP16.59■□□□□ 0.25
NCKIPSD-209ENST00000470006 CRCPO75575 148 aa16.59■□□□□ 0.25
NCKIPSD-209ENST00000470006 SNUPNO95149 360 aaKnown RBP16.59■□□□□ 0.25
NCKIPSD-209ENST00000470006 H6PDO95479 791 aa16.59■□□□□ 0.25
NCKIPSD-209ENST00000470006 DIO1P49895 249 aa16.59■□□□□ 0.25
NCKIPSD-209ENST00000470006 SERPINB9P50453 376 aa16.59■□□□□ 0.25
NCKIPSD-209ENST00000470006 CSNK2A1P68400 391 aaPredicted RBP16.59■□□□□ 0.25
NCKIPSD-209ENST00000470006 LCP2Q13094 533 aa16.59■□□□□ 0.25
NCKIPSD-209ENST00000470006 QPRTQ15274 297 aa16.59■□□□□ 0.25
NCKIPSD-209ENST00000470006 TIGD2Q4W5G0 525 aa16.59■□□□□ 0.25
NCKIPSD-209ENST00000470006 CDC73Q6P1J9 531 aa16.59■□□□□ 0.25
NCKIPSD-209ENST00000470006 ZCCHC12Q6PEW1 402 aa16.59■□□□□ 0.25
NCKIPSD-209ENST00000470006 SPATA19Q7Z5L4 167 aa16.59■□□□□ 0.25
NCKIPSD-209ENST00000470006 SPATA4Q8NEY3 305 aa16.59■□□□□ 0.25
NCKIPSD-209ENST00000470006 FAM76AQ8TAV0 307 aa16.59■□□□□ 0.25
NCKIPSD-209ENST00000470006 CDS1Q92903 461 aa16.59■□□□□ 0.25
NCKIPSD-209ENST00000470006 EGLN2Q96KS0 407 aa16.59■□□□□ 0.25
NCKIPSD-209ENST00000470006 MUS81Q96NY9 551 aa16.59■□□□□ 0.25
NCKIPSD-209ENST00000470006 KCNS3Q9BQ31 491 aa16.59■□□□□ 0.25
NCKIPSD-209ENST00000470006 QRSL1Q9H0R6 528 aaKnown RBP16.59■□□□□ 0.25
NCKIPSD-209ENST00000470006 METTL17Q9H7H0 456 aaPredicted RBP16.59■□□□□ 0.25
NCKIPSD-209ENST00000470006 MID1IP1Q9NPA3 183 aa16.59■□□□□ 0.25
NCKIPSD-209ENST00000470006 SERINC1Q9NRX5 453 aa16.59■□□□□ 0.25
NCKIPSD-209ENST00000470006 UPB1Q9UBR1 384 aa16.59■□□□□ 0.25
NCKIPSD-209ENST00000470006 A0A0A6YYJ9 748 aa16.58■□□□□ 0.24
NCKIPSD-209ENST00000470006 TRIM49D1C9J1S8 452 aa16.58■□□□□ 0.24
NCKIPSD-209ENST00000470006 SLCO1B7G3V0H7 640 aa16.58■□□□□ 0.24
NCKIPSD-209ENST00000470006 CYP7B1O75881 506 aa16.58■□□□□ 0.24
NCKIPSD-209ENST00000470006 RGS9O75916 674 aaPredicted RBP16.58■□□□□ 0.24
NCKIPSD-209ENST00000470006 TFPIP10646 304 aa16.58■□□□□ 0.24
NCKIPSD-209ENST00000470006 IMPDH1P20839 514 aa16.58■□□□□ 0.24
NCKIPSD-209ENST00000470006 SERPINF1P36955 418 aa16.58■□□□□ 0.24
NCKIPSD-209ENST00000470006 FOXG1P55316 489 aaPredicted RBP16.58■□□□□ 0.24
NCKIPSD-209ENST00000470006 CBFBQ13951 182 aa16.58■□□□□ 0.24
NCKIPSD-209ENST00000470006 KLHL26Q53HC5 615 aa16.58■□□□□ 0.24
NCKIPSD-209ENST00000470006 KLHL24Q6TFL4 600 aa16.58■□□□□ 0.24
NCKIPSD-209ENST00000470006 TMEM151AQ8N4L1 468 aa16.58■□□□□ 0.24
NCKIPSD-209ENST00000470006 WDR31Q8NA23 367 aa16.58■□□□□ 0.24
NCKIPSD-209ENST00000470006 OR52E4Q8NGH9 312 aa16.58■□□□□ 0.24
NCKIPSD-209ENST00000470006 ZFAND2BQ8WV99 257 aa16.58■□□□□ 0.24
NCKIPSD-209ENST00000470006 PPCDCQ96CD2 204 aa16.58■□□□□ 0.24
NCKIPSD-209ENST00000470006 ZHX1-C8orf76Q96EF9 292 aa16.58■□□□□ 0.24
NCKIPSD-209ENST00000470006 SNX18Q96RF0 628 aa16.58■□□□□ 0.24
NCKIPSD-209ENST00000470006 AMDHD2Q9Y303 409 aa16.58■□□□□ 0.24
NCKIPSD-209ENST00000470006 SERTM1A2A2V5 107 aa16.57■□□□□ 0.24
NCKIPSD-209ENST00000470006 POC1B-GALNT4F8VUJ3 575 aa16.57■□□□□ 0.24
NCKIPSD-209ENST00000470006 SEC22BO75396 215 aa16.57■□□□□ 0.24
NCKIPSD-209ENST00000470006 ITGA5P08648 1049 aa16.57■□□□□ 0.24
NCKIPSD-209ENST00000470006 EFNA1P20827 205 aaPredicted RBP16.57■□□□□ 0.24
NCKIPSD-209ENST00000470006 PCMT1P22061 227 aa16.57■□□□□ 0.24
NCKIPSD-209ENST00000470006 IL2RGP31785 369 aa16.57■□□□□ 0.24
NCKIPSD-209ENST00000470006 LASP1Q14847 261 aaKnown RBP16.57■□□□□ 0.24
NCKIPSD-209ENST00000470006 TMPPEQ6ZT21 453 aa16.57■□□□□ 0.24
NCKIPSD-209ENST00000470006 MTDHQ86UE4 582 aaKnown RBP16.57■□□□□ 0.24
NCKIPSD-209ENST00000470006 OR5W2Q8NH69 310 aa16.57■□□□□ 0.24
NCKIPSD-209ENST00000470006 ZNF524Q96C55 264 aa16.57■□□□□ 0.24
NCKIPSD-209ENST00000470006 DNAJA3Q96EY1 480 aa16.57■□□□□ 0.24
NCKIPSD-209ENST00000470006 PAFAH2Q99487 392 aa16.57■□□□□ 0.24
NCKIPSD-209ENST00000470006 RAB1BQ9H0U4 201 aa16.57■□□□□ 0.24
NCKIPSD-209ENST00000470006 SLC17A5Q9NRA2 495 aa16.57■□□□□ 0.24
NCKIPSD-209ENST00000470006 IGKV3D-15A0A087WSY6 115 aa16.56■□□□□ 0.24
NCKIPSD-209ENST00000470006 GPR171O14626 319 aa16.56■□□□□ 0.24
NCKIPSD-209ENST00000470006 ZNF264O43296 627 aa16.56■□□□□ 0.24
NCKIPSD-209ENST00000470006 SLU7O95391 586 aaKnown RBP16.56■□□□□ 0.24
NCKIPSD-209ENST00000470006 STAMBPO95630 424 aa16.56■□□□□ 0.24
NCKIPSD-209ENST00000470006 WNT11O96014 354 aa16.56■□□□□ 0.24
NCKIPSD-209ENST00000470006 FOXA1P55317 472 aa16.56■□□□□ 0.24
NCKIPSD-209ENST00000470006 TGFBR3Q03167 851 aa16.56■□□□□ 0.24
NCKIPSD-209ENST00000470006 MERTKQ12866 999 aa16.56■□□□□ 0.24
NCKIPSD-209ENST00000470006 PDK3Q15120 406 aa16.56■□□□□ 0.24
NCKIPSD-209ENST00000470006 SLC25A53Q5H9E4 307 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms