RNA–Protein interactions for RNA: ENST00000465560.5

PTCD3-206, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 747 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-206ENST00000465560 PRORSD1PA6NEY8 169 aa18.3■□□□□ 0.52
PTCD3-206ENST00000465560 AP3D1O14617 1153 aa18.3■□□□□ 0.52
PTCD3-206ENST00000465560 GCM2O75603 506 aaPredicted RBP18.3■□□□□ 0.52
PTCD3-206ENST00000465560 MFN2O95140 757 aa18.3■□□□□ 0.52
PTCD3-206ENST00000465560 RNF224P0DH78 156 aa18.3■□□□□ 0.52
PTCD3-206ENST00000465560 UQCRBP14927 111 aa18.3■□□□□ 0.52
PTCD3-206ENST00000465560 ME2P23368 584 aa18.3■□□□□ 0.52
PTCD3-206ENST00000465560 CLDN20P56880 219 aa18.3■□□□□ 0.52
PTCD3-206ENST00000465560 PSME3P61289 254 aa18.3■□□□□ 0.52
PTCD3-206ENST00000465560 VEZF1Q14119 521 aa18.3■□□□□ 0.52
PTCD3-206ENST00000465560 RPTNQ6XPR3 784 aa18.3■□□□□ 0.52
PTCD3-206ENST00000465560 CCDC80Q76M96 950 aa18.3■□□□□ 0.52
PTCD3-206ENST00000465560 ZNF550Q7Z398 422 aa18.3■□□□□ 0.52
PTCD3-206ENST00000465560 PATL1Q86TB9 770 aaKnown RBP18.3■□□□□ 0.52
PTCD3-206ENST00000465560 GGNQ86UU5 652 aa18.3■□□□□ 0.52
PTCD3-206ENST00000465560 ARMC8Q8IUR7 673 aa18.3■□□□□ 0.52
PTCD3-206ENST00000465560 UBQLNLQ8IYU4 475 aa18.3■□□□□ 0.52
PTCD3-206ENST00000465560 OR2T12Q8NG77 320 aa18.3■□□□□ 0.52
PTCD3-206ENST00000465560 SMPDL3BQ92485 455 aa18.3■□□□□ 0.52
PTCD3-206ENST00000465560 TUBA1CQ9BQE3 449 aa18.3■□□□□ 0.52
PTCD3-206ENST00000465560 TTYH2Q9BSA4 534 aa18.3■□□□□ 0.52
PTCD3-206ENST00000465560 ABCD2Q9UBJ2 740 aa18.3■□□□□ 0.52
PTCD3-206ENST00000465560 USP22Q9UPT9 525 aa18.3■□□□□ 0.52
PTCD3-206ENST00000465560 MPDZO75970 2070 aa18.3■□□□□ 0.52
PTCD3-206ENST00000465560 M0QX08 132 aa18.29■□□□□ 0.52
PTCD3-206ENST00000465560 NME4O00746 187 aa18.29■□□□□ 0.52
PTCD3-206ENST00000465560 SEC14L5O43304 696 aa18.29■□□□□ 0.52
PTCD3-206ENST00000465560 ZG16O60844 167 aa18.29■□□□□ 0.52
PTCD3-206ENST00000465560 EPPINO95925 133 aa18.29■□□□□ 0.52
PTCD3-206ENST00000465560 GKN3PP0CG01 181 aa18.29■□□□□ 0.52
PTCD3-206ENST00000465560 GLI4P10075 376 aa18.29■□□□□ 0.52
PTCD3-206ENST00000465560 IL11P20809 199 aa18.29■□□□□ 0.52
PTCD3-206ENST00000465560 ACAA2P42765 397 aaKnown RBP18.29■□□□□ 0.52
PTCD3-206ENST00000465560 IDH2P48735 452 aaKnown RBP18.29■□□□□ 0.52
PTCD3-206ENST00000465560 SUCLG1P53597 346 aaKnown RBP18.29■□□□□ 0.52
PTCD3-206ENST00000465560 CLDN15P56746 228 aa18.29■□□□□ 0.52
PTCD3-206ENST00000465560 NUP107P57740 925 aa18.29■□□□□ 0.52
PTCD3-206ENST00000465560 EEFSECP57772 596 aaKnown RBP18.29■□□□□ 0.52
PTCD3-206ENST00000465560 DMTNQ08495 405 aa18.29■□□□□ 0.52
PTCD3-206ENST00000465560 SELENBP1Q13228 472 aa18.29■□□□□ 0.52
PTCD3-206ENST00000465560 NSUN5P2Q63ZY6 315 aa18.29■□□□□ 0.52
PTCD3-206ENST00000465560 PLEKHM3Q6ZWE6 761 aa18.29■□□□□ 0.52
PTCD3-206ENST00000465560 GRINAQ7Z429 371 aa18.29■□□□□ 0.52
PTCD3-206ENST00000465560 ADGRE4PQ86SQ3 457 aa18.29■□□□□ 0.52
PTCD3-206ENST00000465560 LACC1Q8IV20 430 aa18.29■□□□□ 0.52
PTCD3-206ENST00000465560 PINK1Q9BXM7 581 aa18.29■□□□□ 0.52
PTCD3-206ENST00000465560 PRDM4Q9UKN5 801 aa18.29■□□□□ 0.52
PTCD3-206ENST00000465560 COL12A1Q99715 3063 aa18.29■□□□□ 0.52
PTCD3-206ENST00000465560 CD8B2A6NJW9 211 aa18.28■□□□□ 0.52
PTCD3-206ENST00000465560 H0YC42 278 aa18.28■□□□□ 0.52
PTCD3-206ENST00000465560 EFNA2O43921 213 aa18.28■□□□□ 0.52
PTCD3-206ENST00000465560 TPST1O60507 370 aa18.28■□□□□ 0.52
PTCD3-206ENST00000465560 OPN1SWP03999 348 aa18.28■□□□□ 0.52
PTCD3-206ENST00000465560 GP1BBP13224 206 aa18.28■□□□□ 0.52
PTCD3-206ENST00000465560 TPD52P55327 224 aaPredicted RBP18.28■□□□□ 0.52
PTCD3-206ENST00000465560 LIPEQ05469 1076 aa18.28■□□□□ 0.52
PTCD3-206ENST00000465560 PMPCAQ10713 525 aa18.28■□□□□ 0.52
PTCD3-206ENST00000465560 MERTKQ12866 999 aa18.28■□□□□ 0.52
PTCD3-206ENST00000465560 SEM1Q6ZVN7 128 aa18.28■□□□□ 0.52
PTCD3-206ENST00000465560 COMTD1Q86VU5 262 aa18.28■□□□□ 0.52
PTCD3-206ENST00000465560 MICU2Q8IYU8 434 aa18.28■□□□□ 0.52
PTCD3-206ENST00000465560 LILRA2Q8N149 483 aa18.28■□□□□ 0.52
PTCD3-206ENST00000465560 UCN2Q96RP3 112 aa18.28■□□□□ 0.52
PTCD3-206ENST00000465560 TRIB1Q96RU8 372 aa18.28■□□□□ 0.52
PTCD3-206ENST00000465560 ALG2Q9H553 416 aa18.28■□□□□ 0.52
PTCD3-206ENST00000465560 TMEM185BQ9H7F4 350 aa18.28■□□□□ 0.52
PTCD3-206ENST00000465560 CALHM2Q9HA72 323 aa18.28■□□□□ 0.52
PTCD3-206ENST00000465560 SPAG4Q9NPE6 437 aa18.28■□□□□ 0.52
PTCD3-206ENST00000465560 CACNA1CQ13936 2221 aa18.28■□□□□ 0.52
PTCD3-206ENST00000465560 INTS1Q8N201 2190 aaKnown RBP18.27■□□□□ 0.52
PTCD3-206ENST00000465560 ELOVL7A1L3X0 281 aa18.27■□□□□ 0.52
PTCD3-206ENST00000465560 GJE1A6NN92 205 aa18.27■□□□□ 0.52
PTCD3-206ENST00000465560 CLCA1A8K7I4 914 aa18.27■□□□□ 0.52
PTCD3-206ENST00000465560 KDM4EB2RXH2 506 aaPredicted RBP18.27■□□□□ 0.52
PTCD3-206ENST00000465560 FRS3O43559 492 aa18.27■□□□□ 0.52
PTCD3-206ENST00000465560 APOBEC1P41238 236 aaKnown RBP18.27■□□□□ 0.52
PTCD3-206ENST00000465560 MNAT1P51948 309 aa18.27■□□□□ 0.52
PTCD3-206ENST00000465560 SMSP52788 366 aa18.27■□□□□ 0.52
PTCD3-206ENST00000465560 CRYBA2P53672 197 aa18.27■□□□□ 0.52
PTCD3-206ENST00000465560 RPS3AP61247 264 aaKnown RBP18.27■□□□□ 0.52
PTCD3-206ENST00000465560 CTU2Q2VPK5 515 aaKnown RBP18.27■□□□□ 0.52
PTCD3-206ENST00000465560 GLIPR1L2Q4G1C9 344 aa18.27■□□□□ 0.52
PTCD3-206ENST00000465560 C3orf33Q6P1S2 294 aa18.27■□□□□ 0.52
PTCD3-206ENST00000465560 ESPNLQ6ZVH7 1005 aa18.27■□□□□ 0.52
PTCD3-206ENST00000465560 PGAM4Q8N0Y7 254 aa18.27■□□□□ 0.52
PTCD3-206ENST00000465560 SMYD1Q8NB12 490 aa18.27■□□□□ 0.52
PTCD3-206ENST00000465560 ITLN2Q8WWU7 325 aaPredicted RBP18.27■□□□□ 0.52
PTCD3-206ENST00000465560 RND1Q92730 232 aa18.27■□□□□ 0.52
PTCD3-206ENST00000465560 TAMM41Q96BW9 452 aa18.27■□□□□ 0.52
PTCD3-206ENST00000465560 ADGRG7Q96K78 797 aa18.27■□□□□ 0.52
PTCD3-206ENST00000465560 KLHL15Q96M94 604 aa18.27■□□□□ 0.52
PTCD3-206ENST00000465560 EVA1AQ9H8M9 152 aa18.27■□□□□ 0.52
PTCD3-206ENST00000465560 TMEM181Q9P2C4 612 aa18.27■□□□□ 0.52
PTCD3-206ENST00000465560 CLCF1Q9UBD9 225 aa18.27■□□□□ 0.52
PTCD3-206ENST00000465560 MBD3L4A6NDZ8 208 aaPredicted RBP18.26■□□□□ 0.51
PTCD3-206ENST00000465560 MBD3L3A6NE82 208 aaPredicted RBP18.26■□□□□ 0.51
PTCD3-206ENST00000465560 MBD3L5A6NJ08 208 aaPredicted RBP18.26■□□□□ 0.51
PTCD3-206ENST00000465560 SYT5O00445 386 aa18.26■□□□□ 0.51
PTCD3-206ENST00000465560 EIF1AYO14602 144 aaKnown RBP18.26■□□□□ 0.51
PTCD3-206ENST00000465560 ADAMDEC1O15204 470 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms