RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 PRR23D2P0DMB1 279 aaPredicted RBP17.24■□□□□ 0.35
TSPAN4-210ENST00000464987 CTBP2P56545 445 aa17.24■□□□□ 0.35
TSPAN4-210ENST00000464987 CNIH2Q6PI25 160 aa17.24■□□□□ 0.35
TSPAN4-210ENST00000464987 RCBTB1Q8NDN9 531 aa17.24■□□□□ 0.35
TSPAN4-210ENST00000464987 AP3S1Q92572 193 aa17.24■□□□□ 0.35
TSPAN4-210ENST00000464987 LMF2Q9BU23 707 aaKnown RBP17.24■□□□□ 0.35
TSPAN4-210ENST00000464987 TTTY10Q9BZA0 68 aa17.24■□□□□ 0.35
TSPAN4-210ENST00000464987 TPSD1Q9BZJ3 242 aa17.24■□□□□ 0.35
TSPAN4-210ENST00000464987 WSB2Q9NYS7 404 aaPredicted RBP17.24■□□□□ 0.35
TSPAN4-210ENST00000464987 DAPL1A0PJW8 107 aa17.23■□□□□ 0.35
TSPAN4-210ENST00000464987 LRRN3E7EW58 273 aa17.23■□□□□ 0.35
TSPAN4-210ENST00000464987 CCR5P51681 352 aa17.23■□□□□ 0.35
TSPAN4-210ENST00000464987 SCN1BQ07699 218 aa17.23■□□□□ 0.35
TSPAN4-210ENST00000464987 STX4Q12846 297 aa17.23■□□□□ 0.35
TSPAN4-210ENST00000464987 PRTGQ2VWP7 1150 aa17.23■□□□□ 0.35
TSPAN4-210ENST00000464987 ALG10BQ5I7T1 473 aa17.23■□□□□ 0.35
TSPAN4-210ENST00000464987 FAM27D1Q5T7N8 215 aa17.23■□□□□ 0.35
TSPAN4-210ENST00000464987 OAFQ86UD1 273 aa17.23■□□□□ 0.35
TSPAN4-210ENST00000464987 CADM2Q8N3J6 435 aa17.23■□□□□ 0.35
TSPAN4-210ENST00000464987 Q8N9G6 341 aaPredicted RBP17.23■□□□□ 0.35
TSPAN4-210ENST00000464987 RBM18Q96H35 190 aaKnown RBP17.23■□□□□ 0.35
TSPAN4-210ENST00000464987 VSTM2LQ96N03 204 aa17.23■□□□□ 0.35
TSPAN4-210ENST00000464987 HOXD1Q9GZZ0 328 aa17.23■□□□□ 0.35
TSPAN4-210ENST00000464987 LRRN3Q9H3W5 708 aa17.23■□□□□ 0.35
TSPAN4-210ENST00000464987 BABAM2Q9NXR7 383 aa17.23■□□□□ 0.35
TSPAN4-210ENST00000464987 TMEM184BQ9Y519 407 aaPredicted RBP17.23■□□□□ 0.35
TSPAN4-210ENST00000464987 FAM86C2PA6NEL3 165 aa17.23■□□□□ 0.35
TSPAN4-210ENST00000464987 PLA2G10O15496 165 aa17.23■□□□□ 0.35
TSPAN4-210ENST00000464987 MAOAP21397 527 aa17.23■□□□□ 0.35
TSPAN4-210ENST00000464987 CRYZQ08257 329 aaKnown RBP17.23■□□□□ 0.35
TSPAN4-210ENST00000464987 ZNF267Q14586 743 aaPredicted RBP17.23■□□□□ 0.35
TSPAN4-210ENST00000464987 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.23■□□□□ 0.35
TSPAN4-210ENST00000464987 ZNF517Q6ZMY9 492 aaPredicted RBP17.23■□□□□ 0.35
TSPAN4-210ENST00000464987 RFLNBQ8N5W9 214 aa17.23■□□□□ 0.35
TSPAN4-210ENST00000464987 CHAC2Q8WUX2 184 aa17.23■□□□□ 0.35
TSPAN4-210ENST00000464987 ZNF426Q9BUY5 554 aa17.23■□□□□ 0.35
TSPAN4-210ENST00000464987 MCCC2Q9HCC0 563 aa17.23■□□□□ 0.35
TSPAN4-210ENST00000464987 ASB6Q9NWX5 421 aa17.23■□□□□ 0.35
TSPAN4-210ENST00000464987 ZMIZ1Q9ULJ6 1067 aa17.23■□□□□ 0.35
TSPAN4-210ENST00000464987 SEC16AO15027 2179 aa17.22■□□□□ 0.35
TSPAN4-210ENST00000464987 A0A1W2PPC4 97 aa17.22■□□□□ 0.35
TSPAN4-210ENST00000464987 HTR3EA5X5Y0 456 aa17.22■□□□□ 0.35
TSPAN4-210ENST00000464987 CCNKO75909 580 aa17.22■□□□□ 0.35
TSPAN4-210ENST00000464987 CSF2P04141 144 aa17.22■□□□□ 0.35
TSPAN4-210ENST00000464987 SLC2A5P22732 501 aa17.22■□□□□ 0.35
TSPAN4-210ENST00000464987 HCCSP53701 268 aa17.22■□□□□ 0.35
TSPAN4-210ENST00000464987 E2F1Q01094 437 aa17.22■□□□□ 0.35
TSPAN4-210ENST00000464987 GALEQ14376 348 aa17.22■□□□□ 0.35
TSPAN4-210ENST00000464987 KIRREL2Q6UWL6 708 aa17.22■□□□□ 0.35
TSPAN4-210ENST00000464987 RPTNQ6XPR3 784 aa17.22■□□□□ 0.35
TSPAN4-210ENST00000464987 SSX6Q7RTT6 188 aa17.22■□□□□ 0.35
TSPAN4-210ENST00000464987 PARGQ86W56 976 aa17.22■□□□□ 0.35
TSPAN4-210ENST00000464987 KLHDC7BQ96G42 594 aa17.22■□□□□ 0.35
TSPAN4-210ENST00000464987 NECTIN4Q96NY8 510 aa17.22■□□□□ 0.35
TSPAN4-210ENST00000464987 ADGRL4Q9HBW9 690 aa17.22■□□□□ 0.35
TSPAN4-210ENST00000464987 POLE3Q9NRF9 147 aa17.22■□□□□ 0.35
TSPAN4-210ENST00000464987 LRIT1Q9P2V4 623 aa17.22■□□□□ 0.35
TSPAN4-210ENST00000464987 TMEM5Q9Y2B1 443 aa17.22■□□□□ 0.35
TSPAN4-210ENST00000464987 PGDP52209 483 aa17.21■□□□□ 0.35
TSPAN4-210ENST00000464987 ZNF85Q03923 595 aa17.21■□□□□ 0.35
TSPAN4-210ENST00000464987 ARL14Q8N4G2 192 aa17.21■□□□□ 0.35
TSPAN4-210ENST00000464987 LRRC17Q8N6Y2 441 aa17.21■□□□□ 0.35
TSPAN4-210ENST00000464987 GDPD1Q8N9F7 314 aa17.21■□□□□ 0.35
TSPAN4-210ENST00000464987 LMF1Q96S06 567 aa17.21■□□□□ 0.35
TSPAN4-210ENST00000464987 B3GAT2Q9NPZ5 323 aa17.21■□□□□ 0.35
TSPAN4-210ENST00000464987 C14orf105Q9NVL8 296 aa17.21■□□□□ 0.35
TSPAN4-210ENST00000464987 POLHQ9Y253 713 aa17.21■□□□□ 0.35
TSPAN4-210ENST00000464987 CLCA3PQ9Y6N3 262 aa17.21■□□□□ 0.35
TSPAN4-210ENST00000464987 SDK1Q7Z5N4 2213 aa17.21■□□□□ 0.35
TSPAN4-210ENST00000464987 A8MV72 311 aaPredicted RBP17.21■□□□□ 0.35
TSPAN4-210ENST00000464987 MAGEB4O15481 346 aaPredicted RBP17.21■□□□□ 0.35
TSPAN4-210ENST00000464987 HCN1O60741 890 aa17.21■□□□□ 0.35
TSPAN4-210ENST00000464987 IGLV3-19P01714 112 aa17.21■□□□□ 0.35
TSPAN4-210ENST00000464987 SBK2P0C263 348 aa17.21■□□□□ 0.35
TSPAN4-210ENST00000464987 CHRNB1P11230 501 aa17.21■□□□□ 0.35
TSPAN4-210ENST00000464987 PPP3R1P63098 170 aa17.21■□□□□ 0.35
TSPAN4-210ENST00000464987 ASAH1Q13510 395 aa17.21■□□□□ 0.35
TSPAN4-210ENST00000464987 ZNHIT3Q15649 155 aaPredicted RBP17.21■□□□□ 0.35
TSPAN4-210ENST00000464987 RPL13AP3Q6NVV1 102 aa17.21■□□□□ 0.35
TSPAN4-210ENST00000464987 ARL9Q6T311 187 aa17.21■□□□□ 0.35
TSPAN4-210ENST00000464987 GRAMD2AQ8IUY3 354 aa17.21■□□□□ 0.35
TSPAN4-210ENST00000464987 C17orf47Q8NEP4 570 aa17.21■□□□□ 0.35
TSPAN4-210ENST00000464987 OR5W2Q8NH69 310 aa17.21■□□□□ 0.35
TSPAN4-210ENST00000464987 OR4C6Q8NH72 309 aa17.21■□□□□ 0.35
TSPAN4-210ENST00000464987 C4orf36Q96KX1 117 aa17.21■□□□□ 0.35
TSPAN4-210ENST00000464987 SOSTQ9BQB4 213 aa17.21■□□□□ 0.35
TSPAN4-210ENST00000464987 PPP1R3EQ9H7J1 279 aa17.21■□□□□ 0.35
TSPAN4-210ENST00000464987 ERVK-19Q9WJR5 959 aa17.21■□□□□ 0.35
TSPAN4-210ENST00000464987 SLC35A3Q9Y2D2 325 aa17.21■□□□□ 0.35
TSPAN4-210ENST00000464987 ABCA7Q8IZY2 2146 aa17.2■□□□□ 0.34
TSPAN4-210ENST00000464987 SLC22A31A6NKX4 558 aa17.2■□□□□ 0.34
TSPAN4-210ENST00000464987 RGS9O75916 674 aaPredicted RBP17.2■□□□□ 0.34
TSPAN4-210ENST00000464987 WNT1P04628 370 aa17.2■□□□□ 0.34
TSPAN4-210ENST00000464987 CT45A8P0DMV1 189 aa17.2■□□□□ 0.34
TSPAN4-210ENST00000464987 CT45A9P0DMV2 189 aa17.2■□□□□ 0.34
TSPAN4-210ENST00000464987 RNH1P13489 461 aaKnown RBP17.2■□□□□ 0.34
TSPAN4-210ENST00000464987 SHC1P29353 583 aa17.2■□□□□ 0.34
TSPAN4-210ENST00000464987 OR12D2P58182 307 aa17.2■□□□□ 0.34
TSPAN4-210ENST00000464987 GXYLT1Q4G148 440 aa17.2■□□□□ 0.34
TSPAN4-210ENST00000464987 CT45A2Q5DJT8 189 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms