RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 EPPINO95925 133 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 LINC00032P0C843 101 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 BCKDHAP12694 445 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 CYP4B1P13584 511 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 EFNA1P20827 205 aaPredicted RBP4.81□□□□□ -1.64
CD46-211ENST00000464082 GDF1P27539 372 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 CHRNB4P30926 498 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 CEACAM8P31997 349 aaPredicted RBP4.81□□□□□ -1.64
CD46-211ENST00000464082 TMED10P49755 219 aaKnown RBP4.81□□□□□ -1.64
CD46-211ENST00000464082 LHX2P50458 406 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 NCBP2P52298 156 aaKnown RBP eCLIP4.81□□□□□ -1.64
CD46-211ENST00000464082 ZNF136P52737 540 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 PNLIPRP2P54317 469 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 CLDN15P56746 228 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 DCAF7P61962 342 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 SNTA1Q13424 505 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 GAB1Q13480 694 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 IMPG1Q17R60 797 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 CFAP157Q5JU67 520 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 RIPPLY2Q5TAB7 128 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 TMEM198Q66K66 360 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 TMEM211Q6ICI0 200 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 SLC30A6Q6NXT4 461 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 PLXDC2Q6UX71 529 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 ANGPTL8Q6UXH0 198 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 B3GNT6Q6ZMB0 384 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 IKBIPQ70UQ0 350 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 YRDCQ86U90 279 aaKnown RBP4.81□□□□□ -1.64
CD46-211ENST00000464082 FAM9CQ8IZT9 166 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 CCDC63Q8NA47 563 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 TNIP2Q8NFZ5 429 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 CLHC1Q8NHS4 586 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 CDC26Q8NHZ8 85 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 RND1Q92730 232 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 EFHD2Q96C19 240 aaPredicted RBP4.81□□□□□ -1.64
CD46-211ENST00000464082 C14orf79Q96F83 325 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 PKNOX2Q96KN3 472 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 JSRP1Q96MG2 331 aaPredicted RBP4.81□□□□□ -1.64
CD46-211ENST00000464082 COL21A1Q96P44 957 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 ZIM3Q96PE6 472 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 TSSK3Q96PN8 268 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 NPAS1Q99742 590 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 CCT7Q99832 543 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 SH3GL2Q99962 352 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 OSBPL11Q9BXB4 747 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 STMN4Q9H169 189 aaPredicted RBP4.81□□□□□ -1.64
CD46-211ENST00000464082 LRTM1Q9HBL6 345 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 SERHLQ9NQF3 203 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 RRAGDQ9NQL2 400 aaPredicted RBP4.81□□□□□ -1.64
CD46-211ENST00000464082 C1orf109Q9NX04 203 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 HAO1Q9UJM8 370 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 MID2Q9UJV3 735 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 PSME2Q9UL46 239 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 MAPRE3Q9UPY8 281 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 WIF1Q9Y5W5 379 aa4.81□□□□□ -1.64
CD46-211ENST00000464082 YLPM1P49750 1951 aaKnown RBP4.8□□□□□ -1.64
CD46-211ENST00000464082 IGLV3-32A0A0A0MS00 114 aa4.8□□□□□ -1.64
CD46-211ENST00000464082 C15orf38-AP3S2A0A0A6YYH1 394 aa4.8□□□□□ -1.64
CD46-211ENST00000464082 CCDC151A5D8V7 595 aa4.8□□□□□ -1.64
CD46-211ENST00000464082 MBD3L4A6NDZ8 208 aaPredicted RBP4.8□□□□□ -1.64
CD46-211ENST00000464082 MBD3L3A6NE82 208 aaPredicted RBP4.8□□□□□ -1.64
CD46-211ENST00000464082 MBD3L5A6NJ08 208 aaPredicted RBP4.8□□□□□ -1.64
CD46-211ENST00000464082 CD8B2A6NJW9 211 aa4.8□□□□□ -1.64
CD46-211ENST00000464082 SLC28A1O00337 649 aa4.8□□□□□ -1.64
CD46-211ENST00000464082 ANKRD28O15084 1053 aa4.8□□□□□ -1.64
CD46-211ENST00000464082 RGS14O43566 566 aa4.8□□□□□ -1.64
CD46-211ENST00000464082 AKAP10O43572 662 aa4.8□□□□□ -1.64
CD46-211ENST00000464082 HCRTR2O43614 444 aa4.8□□□□□ -1.64
CD46-211ENST00000464082 REM1O75628 298 aa4.8□□□□□ -1.64
CD46-211ENST00000464082 BCAS2O75934 225 aaPredicted RBP4.8□□□□□ -1.64
CD46-211ENST00000464082 NKX2-2O95096 273 aa4.8□□□□□ -1.64
CD46-211ENST00000464082 C1QCP02747 245 aa4.8□□□□□ -1.64
CD46-211ENST00000464082 HOXD4P09016 255 aaPredicted RBP4.8□□□□□ -1.64
CD46-211ENST00000464082 ACP2P11117 423 aa4.8□□□□□ -1.64
CD46-211ENST00000464082 LAMP1P11279 417 aa4.8□□□□□ -1.64
CD46-211ENST00000464082 NEFHP12036 1026 aa4.8□□□□□ -1.64
CD46-211ENST00000464082 GABRA1P14867 456 aa4.8□□□□□ -1.64
CD46-211ENST00000464082 ELAVL4P26378 380 aaKnown RBP4.8□□□□□ -1.64
CD46-211ENST00000464082 SRD5A2P31213 254 aa4.8□□□□□ -1.64
CD46-211ENST00000464082 EVI2BP34910 448 aa4.8□□□□□ -1.64
CD46-211ENST00000464082 MPIP34949 423 aa4.8□□□□□ -1.64
CD46-211ENST00000464082 TIMP3P35625 211 aa4.8□□□□□ -1.64
CD46-211ENST00000464082 ZFP36L2P47974 494 aaKnown RBP4.8□□□□□ -1.64
CD46-211ENST00000464082 MASP1P48740 699 aa4.8□□□□□ -1.64
CD46-211ENST00000464082 CLDN18P56856 261 aa4.8□□□□□ -1.64
CD46-211ENST00000464082 RPL38P63173 70 aaKnown RBP4.8□□□□□ -1.64
CD46-211ENST00000464082 PHC1P78364 1004 aa4.8□□□□□ -1.64
CD46-211ENST00000464082 ZNF155Q12901 538 aaPredicted RBP4.8□□□□□ -1.64
CD46-211ENST00000464082 HSPB3Q12988 150 aa4.8□□□□□ -1.64
CD46-211ENST00000464082 PTGR1Q14914 329 aa4.8□□□□□ -1.64
CD46-211ENST00000464082 MLC1Q15049 377 aa4.8□□□□□ -1.64
CD46-211ENST00000464082 TMEM44Q2T9K0 475 aa4.8□□□□□ -1.64
CD46-211ENST00000464082 GALNTL6Q49A17 601 aa4.8□□□□□ -1.64
CD46-211ENST00000464082 C6orf136Q5SQH8 315 aa4.8□□□□□ -1.64
CD46-211ENST00000464082 SH2D4BQ5SQS7 431 aa4.8□□□□□ -1.64
CD46-211ENST00000464082 WLSQ5T9L3 541 aa4.8□□□□□ -1.64
CD46-211ENST00000464082 C6orf163Q5TEZ5 329 aa4.8□□□□□ -1.64
CD46-211ENST00000464082 OR5M10Q6IEU7 315 aa4.8□□□□□ -1.64
CD46-211ENST00000464082 MEX3BQ6ZN04 569 aaKnown RBP4.8□□□□□ -1.64
CD46-211ENST00000464082 PLCZ1Q86YW0 608 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms