RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 BCAS1O75363 584 aaPredicted RBP17.87■□□□□ 0.45
COL9A3-204ENST00000463487 MFN2O95140 757 aa17.87■□□□□ 0.45
COL9A3-204ENST00000463487 C8BP07358 591 aa17.87■□□□□ 0.45
COL9A3-204ENST00000463487 STARP49675 285 aa17.87■□□□□ 0.45
COL9A3-204ENST00000463487 CLDN18P56856 261 aa17.87■□□□□ 0.45
COL9A3-204ENST00000463487 MERTKQ12866 999 aa17.87■□□□□ 0.45
COL9A3-204ENST00000463487 TOMM34Q15785 309 aaPredicted RBP17.87■□□□□ 0.45
COL9A3-204ENST00000463487 LACC1Q8IV20 430 aa17.87■□□□□ 0.45
COL9A3-204ENST00000463487 LILRA2Q8N149 483 aa17.87■□□□□ 0.45
COL9A3-204ENST00000463487 SLC25A43Q8WUT9 341 aaPredicted RBP17.87■□□□□ 0.45
COL9A3-204ENST00000463487 ABCD2Q9UBJ2 740 aa17.87■□□□□ 0.45
COL9A3-204ENST00000463487 SYT5O00445 386 aa17.86■□□□□ 0.45
COL9A3-204ENST00000463487 PSMA4P25789 261 aaKnown RBP17.86■□□□□ 0.45
COL9A3-204ENST00000463487 SLC7A1P30825 629 aa17.86■□□□□ 0.45
COL9A3-204ENST00000463487 MAP2K6P52564 334 aa17.86■□□□□ 0.45
COL9A3-204ENST00000463487 RGS8P57771 180 aaPredicted RBP17.86■□□□□ 0.45
COL9A3-204ENST00000463487 SGCBQ16585 318 aa17.86■□□□□ 0.45
COL9A3-204ENST00000463487 SPATS1Q496A3 300 aa17.86■□□□□ 0.45
COL9A3-204ENST00000463487 ACSF3Q4G176 576 aaPredicted RBP17.86■□□□□ 0.45
COL9A3-204ENST00000463487 WBP2NLQ6ICG8 309 aa17.86■□□□□ 0.45
COL9A3-204ENST00000463487 ESPNLQ6ZVH7 1005 aa17.86■□□□□ 0.45
COL9A3-204ENST00000463487 RANBP3LQ86VV4 465 aaPredicted RBP17.86■□□□□ 0.45
COL9A3-204ENST00000463487 CLIP4Q8N3C7 705 aa17.86■□□□□ 0.45
COL9A3-204ENST00000463487 POC1BQ8TC44 478 aa17.86■□□□□ 0.45
COL9A3-204ENST00000463487 RND1Q92730 232 aa17.86■□□□□ 0.45
COL9A3-204ENST00000463487 PROX1Q92786 737 aa17.86■□□□□ 0.45
COL9A3-204ENST00000463487 TRIB1Q96RU8 372 aa17.86■□□□□ 0.45
COL9A3-204ENST00000463487 CALHM2Q9HA72 323 aa17.86■□□□□ 0.45
COL9A3-204ENST00000463487 TIGARQ9NQ88 270 aa17.86■□□□□ 0.45
COL9A3-204ENST00000463487 COQ3Q9NZJ6 369 aa17.86■□□□□ 0.45
COL9A3-204ENST00000463487 TMEM181Q9P2C4 612 aa17.86■□□□□ 0.45
COL9A3-204ENST00000463487 RPS6KB2Q9UBS0 482 aa17.86■□□□□ 0.45
COL9A3-204ENST00000463487 ERRFI1Q9UJM3 462 aaPredicted RBP17.86■□□□□ 0.45
COL9A3-204ENST00000463487 BAG5Q9UL15 447 aa17.86■□□□□ 0.45
COL9A3-204ENST00000463487 PCNX3Q9H6A9 2034 aa17.86■□□□□ 0.45
COL9A3-204ENST00000463487 CD8B2A6NJW9 211 aa17.85■□□□□ 0.45
COL9A3-204ENST00000463487 EIF1AYO14602 144 aaKnown RBP17.85■□□□□ 0.45
COL9A3-204ENST00000463487 AP3D1O14617 1153 aa17.85■□□□□ 0.45
COL9A3-204ENST00000463487 SEMA7AO75326 666 aa17.85■□□□□ 0.45
COL9A3-204ENST00000463487 NTN1O95631 604 aa17.85■□□□□ 0.45
COL9A3-204ENST00000463487 EPPINO95925 133 aa17.85■□□□□ 0.45
COL9A3-204ENST00000463487 GKN3PP0CG01 181 aa17.85■□□□□ 0.45
COL9A3-204ENST00000463487 SLC1A3P43003 542 aa17.85■□□□□ 0.45
COL9A3-204ENST00000463487 GSK3BP49841 420 aa17.85■□□□□ 0.45
COL9A3-204ENST00000463487 POLR2HP52434 150 aaKnown RBP17.85■□□□□ 0.45
COL9A3-204ENST00000463487 DLX5P56178 289 aa17.85■□□□□ 0.45
COL9A3-204ENST00000463487 PLAURQ03405 335 aa17.85■□□□□ 0.45
COL9A3-204ENST00000463487 LRRC23Q53EV4 343 aaPredicted RBP17.85■□□□□ 0.45
COL9A3-204ENST00000463487 SAMD4BQ5PRF9 694 aaKnown RBP17.85■□□□□ 0.45
COL9A3-204ENST00000463487 PLEKHM3Q6ZWE6 761 aa17.85■□□□□ 0.45
COL9A3-204ENST00000463487 CADM2Q8N3J6 435 aa17.85■□□□□ 0.45
COL9A3-204ENST00000463487 SMYD1Q8NB12 490 aa17.85■□□□□ 0.45
COL9A3-204ENST00000463487 SSC4DQ8WTU2 575 aa17.85■□□□□ 0.45
COL9A3-204ENST00000463487 LZICQ8WZA0 190 aa17.85■□□□□ 0.45
COL9A3-204ENST00000463487 KLHL15Q96M94 604 aa17.85■□□□□ 0.45
COL9A3-204ENST00000463487 DMRTA2Q96SC8 542 aa17.85■□□□□ 0.45
COL9A3-204ENST00000463487 KLHDC3Q9BQ90 382 aa17.85■□□□□ 0.45
COL9A3-204ENST00000463487 SELENONQ9NZV5 590 aa17.85■□□□□ 0.45
COL9A3-204ENST00000463487 TESQ9UGI8 421 aaKnown RBP17.85■□□□□ 0.45
COL9A3-204ENST00000463487 SLC9A8Q9Y2E8 581 aa17.85■□□□□ 0.45
COL9A3-204ENST00000463487 HEATR5AQ86XA9 2040 aa17.84■□□□□ 0.45
COL9A3-204ENST00000463487 MYO18BQ8IUG5 2567 aa17.84■□□□□ 0.45
COL9A3-204ENST00000463487 B2RBV5 119 aa17.84■□□□□ 0.45
COL9A3-204ENST00000463487 OPN1SWP03999 348 aa17.84■□□□□ 0.45
COL9A3-204ENST00000463487 KDELR2P33947 212 aa17.84■□□□□ 0.45
COL9A3-204ENST00000463487 KCNJ5P48544 419 aa17.84■□□□□ 0.45
COL9A3-204ENST00000463487 SLC25A3Q00325 362 aa17.84■□□□□ 0.45
COL9A3-204ENST00000463487 DMTNQ08495 405 aa17.84■□□□□ 0.45
COL9A3-204ENST00000463487 NSUN5P2Q63ZY6 315 aa17.84■□□□□ 0.45
COL9A3-204ENST00000463487 POMZP3Q6PJE2 187 aa17.84■□□□□ 0.45
COL9A3-204ENST00000463487 P4HA3Q7Z4N8 544 aa17.84■□□□□ 0.45
COL9A3-204ENST00000463487 DEFB107AQ8IZN7 70 aa17.84■□□□□ 0.45
COL9A3-204ENST00000463487 OR10Q1Q8NGQ4 319 aa17.84■□□□□ 0.45
COL9A3-204ENST00000463487 FIG4Q92562 907 aa17.84■□□□□ 0.45
COL9A3-204ENST00000463487 CCDC120Q96HB5 630 aa17.84■□□□□ 0.45
COL9A3-204ENST00000463487 TM9SF2Q99805 663 aa17.84■□□□□ 0.45
COL9A3-204ENST00000463487 TUBA1CQ9BQE3 449 aa17.84■□□□□ 0.45
COL9A3-204ENST00000463487 TTYH2Q9BSA4 534 aa17.84■□□□□ 0.45
COL9A3-204ENST00000463487 TMEM185BQ9H7F4 350 aa17.84■□□□□ 0.45
COL9A3-204ENST00000463487 ADPRHL2Q9NX46 363 aa17.84■□□□□ 0.45
COL9A3-204ENST00000463487 CHRNA9Q9UGM1 479 aa17.84■□□□□ 0.45
COL9A3-204ENST00000463487 CLCA1A8K7I4 914 aa17.83■□□□□ 0.44
COL9A3-204ENST00000463487 CXCR6O00574 342 aa17.83■□□□□ 0.44
COL9A3-204ENST00000463487 LGI1O95970 557 aa17.83■□□□□ 0.44
COL9A3-204ENST00000463487 FCGR2AP12318 317 aa17.83■□□□□ 0.44
COL9A3-204ENST00000463487 SFTPDP35247 375 aa17.83■□□□□ 0.44
COL9A3-204ENST00000463487 ACAA2P42765 397 aaKnown RBP17.83■□□□□ 0.44
COL9A3-204ENST00000463487 EIF1AXP47813 144 aaKnown RBP17.83■□□□□ 0.44
COL9A3-204ENST00000463487 CLDN20P56880 219 aa17.83■□□□□ 0.44
COL9A3-204ENST00000463487 PMPCAQ10713 525 aa17.83■□□□□ 0.44
COL9A3-204ENST00000463487 HBMQ6B0K9 141 aa17.83■□□□□ 0.44
COL9A3-204ENST00000463487 ARHGAP24Q8N264 748 aa17.83■□□□□ 0.44
COL9A3-204ENST00000463487 ATP6V1C2Q8NEY4 427 aa17.83■□□□□ 0.44
COL9A3-204ENST00000463487 OR52E4Q8NGH9 312 aa17.83■□□□□ 0.44
COL9A3-204ENST00000463487 OR2V1Q8NHB1 315 aa17.83■□□□□ 0.44
COL9A3-204ENST00000463487 TAMM41Q96BW9 452 aa17.83■□□□□ 0.44
COL9A3-204ENST00000463487 ZNF559Q9BR84 538 aa17.83■□□□□ 0.44
COL9A3-204ENST00000463487 TRIM2Q9C040 744 aa17.83■□□□□ 0.44
COL9A3-204ENST00000463487 MCTS1Q9ULC4 181 aaKnown RBP17.83■□□□□ 0.44
COL9A3-204ENST00000463487 ZNF175Q9Y473 711 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms