RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 SPEF1Q9Y4P9 236 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 A0A096LPE4 126 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 A0A096LPK6 155 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 A0A1W2PPZ6 126 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 GJE1A6NN92 205 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 M0R1B8 84 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 MANBAO00462 879 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 KCNK2O95069 426 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 KCNH1O95259 989 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 SLU7O95391 586 aaKnown RBP6.71□□□□□ -1.34
SMC3-202ENST00000462899 H6PDO95479 791 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 ESRRBO95718 433 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 OTCP00480 354 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 IGFBP1P08833 259 aaPredicted RBP6.71□□□□□ -1.34
SMC3-202ENST00000462899 SBK3P0C264 359 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 ACP2P11117 423 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 PRKCAP17252 672 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 LCN1P31025 176 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 GABRA3P34903 492 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 GSTM5P46439 218 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 PPOXP50336 477 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 NCBP2P52298 156 aaKnown RBP eCLIP6.71□□□□□ -1.34
SMC3-202ENST00000462899 CHN2P52757 468 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 SELENBP1Q13228 472 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 NAB1Q13506 487 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 PDK3Q15120 406 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 ZNHIT3Q15649 155 aaPredicted RBP6.71□□□□□ -1.34
SMC3-202ENST00000462899 EFNB3Q15768 340 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 TMEM176BQ3YBM2 270 aaPredicted RBP6.71□□□□□ -1.34
SMC3-202ENST00000462899 IQCCQ4KMZ1 466 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 SPIN4Q56A73 249 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 FAM71E1Q6IPT2 247 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 RINLQ6ZS11 566 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 C3orf62Q6ZUJ4 267 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 GALNT5Q7Z7M9 940 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 PEG10Q86TG7 708 aaKnown RBP6.71□□□□□ -1.34
SMC3-202ENST00000462899 CTAGE3PQ8IX95 158 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 LRRC17Q8N6Y2 441 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 PPM1NQ8N819 430 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 ZNF527Q8NB42 609 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 ZNF540Q8NDQ6 660 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 B4GALNT2Q8NHY0 566 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 FBXO27Q8NI29 283 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 FBF1Q8TES7 1133 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 BOD1Q96IK1 185 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 BBS4Q96RK4 519 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 ZNF747Q9BV97 191 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 PLK3Q9H4B4 646 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 METTL17Q9H7H0 456 aaPredicted RBP6.71□□□□□ -1.34
SMC3-202ENST00000462899 ANKZF1Q9H8Y5 726 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 C3orf14Q9HBI5 128 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 TPSG1Q9NRR2 321 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 GIMAP4Q9NUV9 329 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 TAS2R16Q9NYV7 291 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 ARMCX1Q9P291 453 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 SNX6Q9UNH7 406 aa6.71□□□□□ -1.34
SMC3-202ENST00000462899 GNG14A0A1W2PPG7 69 aa6.7□□□□□ -1.34
SMC3-202ENST00000462899 C9JVG2 144 aa6.7□□□□□ -1.34
SMC3-202ENST00000462899 DNAJA2O60884 412 aa6.7□□□□□ -1.34
SMC3-202ENST00000462899 PDE5AO76074 875 aa6.7□□□□□ -1.34
SMC3-202ENST00000462899 OR4F21O95013 312 aa6.7□□□□□ -1.34
SMC3-202ENST00000462899 PGCP20142 388 aa6.7□□□□□ -1.34
SMC3-202ENST00000462899 APEX1P27695 318 aaKnown RBP6.7□□□□□ -1.34
SMC3-202ENST00000462899 ARL1P40616 181 aaPredicted RBP6.7□□□□□ -1.34
SMC3-202ENST00000462899 KHKP50053 298 aa6.7□□□□□ -1.34
SMC3-202ENST00000462899 HTR6P50406 440 aa6.7□□□□□ -1.34
SMC3-202ENST00000462899 SLC16A1P53985 500 aa6.7□□□□□ -1.34
SMC3-202ENST00000462899 SUMO3P55854 103 aaPredicted RBP6.7□□□□□ -1.34
SMC3-202ENST00000462899 SNRPD2P62316 118 aaKnown RBP6.7□□□□□ -1.34
SMC3-202ENST00000462899 GUCY2DQ02846 1103 aa6.7□□□□□ -1.34
SMC3-202ENST00000462899 CHRNEQ04844 493 aa6.7□□□□□ -1.34
SMC3-202ENST00000462899 ZNF763Q0D2J5 394 aa6.7□□□□□ -1.34
SMC3-202ENST00000462899 TRIP10Q15642 601 aa6.7□□□□□ -1.34
SMC3-202ENST00000462899 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.7□□□□□ -1.34
SMC3-202ENST00000462899 C1QTNF12Q5T7M4 302 aa6.7□□□□□ -1.34
SMC3-202ENST00000462899 OR7E24Q6IFN5 339 aa6.7□□□□□ -1.34
SMC3-202ENST00000462899 MTERF4Q7Z6M4 381 aaKnown RBP6.7□□□□□ -1.34
SMC3-202ENST00000462899 GAS2L3Q86XJ1 694 aa6.7□□□□□ -1.34
SMC3-202ENST00000462899 SLC35F6Q8N357 371 aa6.7□□□□□ -1.34
SMC3-202ENST00000462899 C17orf78Q8N4C9 275 aa6.7□□□□□ -1.34
SMC3-202ENST00000462899 SLC16A11Q8NCK7 471 aa6.7□□□□□ -1.34
SMC3-202ENST00000462899 C1orf162Q8NEQ5 155 aaPredicted RBP6.7□□□□□ -1.34
SMC3-202ENST00000462899 NUP43Q8NFH3 380 aa6.7□□□□□ -1.34
SMC3-202ENST00000462899 OR6Y1Q8NGX8 325 aa6.7□□□□□ -1.34
SMC3-202ENST00000462899 GPR119Q8TDV5 335 aa6.7□□□□□ -1.34
SMC3-202ENST00000462899 WFDC12Q8WWY7 111 aa6.7□□□□□ -1.34
SMC3-202ENST00000462899 GCDHQ92947 438 aaPredicted RBP6.7□□□□□ -1.34
SMC3-202ENST00000462899 FBXO17Q96EF6 278 aa6.7□□□□□ -1.34
SMC3-202ENST00000462899 RBM4Q9BWF3 364 aaKnown RBP6.7□□□□□ -1.34
SMC3-202ENST00000462899 EBPLQ9BY08 206 aa6.7□□□□□ -1.34
SMC3-202ENST00000462899 TRIM31Q9BZY9 425 aa6.7□□□□□ -1.34
SMC3-202ENST00000462899 FKRPQ9H9S5 495 aa6.7□□□□□ -1.34
SMC3-202ENST00000462899 ESM1Q9NQ30 184 aa6.7□□□□□ -1.34
SMC3-202ENST00000462899 SLC17A5Q9NRA2 495 aa6.7□□□□□ -1.34
SMC3-202ENST00000462899 UBQLN4Q9NRR5 601 aa6.7□□□□□ -1.34
SMC3-202ENST00000462899 NMRK1Q9NWW6 199 aa6.7□□□□□ -1.34
SMC3-202ENST00000462899 GRHL1Q9NZI5 618 aa6.7□□□□□ -1.34
SMC3-202ENST00000462899 TMCO1Q9UM00 188 aa6.7□□□□□ -1.34
SMC3-202ENST00000462899 SNX24Q9Y343 169 aa6.7□□□□□ -1.34
SMC3-202ENST00000462899 ATP23Q9Y6H3 246 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms