RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 SLITRK3O94933 977 aa4.12□□□□□ -1.75
CKAP2-204ENST00000459902 UGT1A5P35504 534 aa4.12□□□□□ -1.75
CKAP2-204ENST00000459902 HPCAL1P37235 193 aa4.12□□□□□ -1.75
CKAP2-204ENST00000459902 POLR2FP61218 127 aaKnown RBP4.12□□□□□ -1.75
CKAP2-204ENST00000459902 CSTF1Q05048 431 aaKnown RBP4.12□□□□□ -1.75
CKAP2-204ENST00000459902 MXD4Q14582 209 aaPredicted RBP4.12□□□□□ -1.75
CKAP2-204ENST00000459902 BLOC1S2Q6QNY1 142 aa4.12□□□□□ -1.75
CKAP2-204ENST00000459902 ARMCX2Q7L311 632 aa4.12□□□□□ -1.75
CKAP2-204ENST00000459902 EGFL6Q8IUX8 553 aa4.12□□□□□ -1.75
CKAP2-204ENST00000459902 NRMQ8IXM6 262 aa4.12□□□□□ -1.75
CKAP2-204ENST00000459902 RAET1EQ8TD07 263 aa4.12□□□□□ -1.75
CKAP2-204ENST00000459902 SPRYD4Q8WW59 207 aaPredicted RBP4.12□□□□□ -1.75
CKAP2-204ENST00000459902 OR1E3Q8WZA6 343 aa4.12□□□□□ -1.75
CKAP2-204ENST00000459902 C16orf45Q96MC5 204 aaPredicted RBP4.12□□□□□ -1.75
CKAP2-204ENST00000459902 ARHGDIGQ99819 225 aa4.12□□□□□ -1.75
CKAP2-204ENST00000459902 EBF4Q9BQW3 602 aa4.12□□□□□ -1.75
CKAP2-204ENST00000459902 NAT10Q9H0A0 1025 aaKnown RBP4.12□□□□□ -1.75
CKAP2-204ENST00000459902 ZNF385DQ9H6B1 395 aa4.12□□□□□ -1.75
CKAP2-204ENST00000459902 AIPL1Q9NZN9 384 aa4.12□□□□□ -1.75
CKAP2-204ENST00000459902 PINLYPA6NC86 204 aa4.11□□□□□ -1.75
CKAP2-204ENST00000459902 G3V4G9 280 aa4.11□□□□□ -1.75
CKAP2-204ENST00000459902 PRKYO43930 277 aa4.11□□□□□ -1.75
CKAP2-204ENST00000459902 PRKXP51817 358 aa4.11□□□□□ -1.75
CKAP2-204ENST00000459902 AP3M2P53677 418 aa4.11□□□□□ -1.75
CKAP2-204ENST00000459902 TIMM10P62072 90 aa4.11□□□□□ -1.75
CKAP2-204ENST00000459902 IRX3P78415 501 aaPredicted RBP4.11□□□□□ -1.75
CKAP2-204ENST00000459902 CHRNB3Q05901 458 aa4.11□□□□□ -1.75
CKAP2-204ENST00000459902 CCDC173Q0VFZ6 552 aa4.11□□□□□ -1.75
CKAP2-204ENST00000459902 ZNF630Q2M218 657 aaPredicted RBP4.11□□□□□ -1.75
CKAP2-204ENST00000459902 GGTA1PQ4G0N0 100 aa4.11□□□□□ -1.75
CKAP2-204ENST00000459902 RIPPLY2Q5TAB7 128 aa4.11□□□□□ -1.75
CKAP2-204ENST00000459902 ATL3Q6DD88 541 aa4.11□□□□□ -1.75
CKAP2-204ENST00000459902 FAM71F2Q6NXP2 309 aa4.11□□□□□ -1.75
CKAP2-204ENST00000459902 ARCQ7LC44 396 aa4.11□□□□□ -1.75
CKAP2-204ENST00000459902 ACOT1Q86TX2 421 aa4.11□□□□□ -1.75
CKAP2-204ENST00000459902 TPRA1Q86W33 373 aa4.11□□□□□ -1.75
CKAP2-204ENST00000459902 SVOPLQ8N434 492 aa4.11□□□□□ -1.75
CKAP2-204ENST00000459902 DCAF4L2Q8NA75 395 aa4.11□□□□□ -1.75
CKAP2-204ENST00000459902 RPL3LQ92901 407 aaKnown RBP4.11□□□□□ -1.75
CKAP2-204ENST00000459902 KLHDC3Q9BQ90 382 aa4.11□□□□□ -1.75
CKAP2-204ENST00000459902 TMEM117Q9H0C3 514 aa4.11□□□□□ -1.75
CKAP2-204ENST00000459902 MAGT1Q9H0U3 335 aa4.11□□□□□ -1.75
CKAP2-204ENST00000459902 NXF5Q9H1B4 397 aaKnown RBP4.11□□□□□ -1.75
CKAP2-204ENST00000459902 SH2D2AQ9NP31 389 aa4.11□□□□□ -1.75
CKAP2-204ENST00000459902 LAMP5Q9UJQ1 280 aa4.11□□□□□ -1.75
CKAP2-204ENST00000459902 ERVW-1Q9UQF0 538 aa4.11□□□□□ -1.75
CKAP2-204ENST00000459902 A0A1B0GWJ7 208 aa4.1□□□□□ -1.75
CKAP2-204ENST00000459902 NR2C1P13056 603 aa4.1□□□□□ -1.75
CKAP2-204ENST00000459902 KRT13P13646 458 aa4.1□□□□□ -1.75
CKAP2-204ENST00000459902 MDKP21741 143 aaPredicted RBP4.1□□□□□ -1.75
CKAP2-204ENST00000459902 DRD5P21918 477 aa4.1□□□□□ -1.75
CKAP2-204ENST00000459902 CD1BP29016 333 aa4.1□□□□□ -1.75
CKAP2-204ENST00000459902 APOC4P55056 127 aa4.1□□□□□ -1.75
CKAP2-204ENST00000459902 CCDC137Q6PK04 289 aaKnown RBP4.1□□□□□ -1.75
CKAP2-204ENST00000459902 LINC01555Q8NAE3 123 aa4.1□□□□□ -1.75
CKAP2-204ENST00000459902 FAM3CQ92520 227 aa4.1□□□□□ -1.75
CKAP2-204ENST00000459902 TMEM101Q96IK0 257 aa4.1□□□□□ -1.75
CKAP2-204ENST00000459902 PGLYRP4Q96LB8 373 aa4.1□□□□□ -1.75
CKAP2-204ENST00000459902 RHBGQ9H310 441 aa4.1□□□□□ -1.75
CKAP2-204ENST00000459902 NANOGQ9H9S0 305 aa4.1□□□□□ -1.75
CKAP2-204ENST00000459902 SLC35D1Q9NTN3 355 aa4.1□□□□□ -1.75
CKAP2-204ENST00000459902 SIGLEC8Q9NYZ4 499 aa4.1□□□□□ -1.75
CKAP2-204ENST00000459902 NEU3Q9UQ49 428 aa4.1□□□□□ -1.75
CKAP2-204ENST00000459902 UGT2A1Q9Y4X1 527 aa4.1□□□□□ -1.75
CKAP2-204ENST00000459902 MAD1L1Q9Y6D9 718 aa4.1□□□□□ -1.75
CKAP2-204ENST00000459902 TTC21BQ7Z4L5 1316 aa4.1□□□□□ -1.75
CKAP2-204ENST00000459902 A0A0G2JRQ6 117 aa4.09□□□□□ -1.75
CKAP2-204ENST00000459902 A0A1W2PNV4 684 aa4.09□□□□□ -1.75
CKAP2-204ENST00000459902 E7ESA3 106 aa4.09□□□□□ -1.75
CKAP2-204ENST00000459902 H2BFMP0C1H6 154 aa4.09□□□□□ -1.75
CKAP2-204ENST00000459902 EPB41P11171 864 aaKnown RBP4.09□□□□□ -1.75
CKAP2-204ENST00000459902 CCNE1P24864 410 aa4.09□□□□□ -1.75
CKAP2-204ENST00000459902 CA8P35219 290 aa4.09□□□□□ -1.75
CKAP2-204ENST00000459902 PLK1P53350 603 aa4.09□□□□□ -1.75
CKAP2-204ENST00000459902 HSPA2P54652 639 aa4.09□□□□□ -1.75
CKAP2-204ENST00000459902 DAZ2Q13117 558 aaKnown RBP4.09□□□□□ -1.75
CKAP2-204ENST00000459902 HSP90AB3PQ58FF7 597 aa4.09□□□□□ -1.75
CKAP2-204ENST00000459902 ACOT7LQ6ZUV0 252 aa4.09□□□□□ -1.75
CKAP2-204ENST00000459902 VRK2Q86Y07 508 aa4.09□□□□□ -1.75
CKAP2-204ENST00000459902 CLDN19Q8N6F1 224 aa4.09□□□□□ -1.75
CKAP2-204ENST00000459902 OR10A7Q8NGE5 316 aa4.09□□□□□ -1.75
CKAP2-204ENST00000459902 OR56B4Q8NH76 319 aa4.09□□□□□ -1.75
CKAP2-204ENST00000459902 TCTEX1D2Q8WW35 142 aa4.09□□□□□ -1.75
CKAP2-204ENST00000459902 ZNF799Q96GE5 643 aa4.09□□□□□ -1.75
CKAP2-204ENST00000459902 MYCBPQ99417 103 aaPredicted RBP4.09□□□□□ -1.75
CKAP2-204ENST00000459902 NARFLQ9H6Q4 476 aa4.09□□□□□ -1.75
CKAP2-204ENST00000459902 APMAPQ9HDC9 416 aa4.09□□□□□ -1.75
CKAP2-204ENST00000459902 DAZ3Q9NR90 486 aaKnown RBP4.09□□□□□ -1.75
CKAP2-204ENST00000459902 CDH10Q9Y6N8 788 aa4.09□□□□□ -1.75
CKAP2-204ENST00000459902 PLEKHG1Q9ULL1 1385 aa4.09□□□□□ -1.75
CKAP2-204ENST00000459902 GTF3C1Q12789 2109 aa4.09□□□□□ -1.76
CKAP2-204ENST00000459902 PSMB11A5LHX3 300 aa4.08□□□□□ -1.76
CKAP2-204ENST00000459902 VSTM2BA6NLU5 285 aa4.08□□□□□ -1.76
CKAP2-204ENST00000459902 NPIPA7E9PJI5 369 aa4.08□□□□□ -1.76
CKAP2-204ENST00000459902 RS1O15537 224 aa4.08□□□□□ -1.76
CKAP2-204ENST00000459902 BCAS1O75363 584 aaPredicted RBP4.08□□□□□ -1.76
CKAP2-204ENST00000459902 SNAPINO95295 136 aa4.08□□□□□ -1.76
CKAP2-204ENST00000459902 NPIPA8P0DM63 369 aa4.08□□□□□ -1.76
CKAP2-204ENST00000459902 PAX7P23759 505 aa4.08□□□□□ -1.76
CKAP2-204ENST00000459902 NUP107P57740 925 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms