RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 SERPINA4P29622 427 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 FMO3P31513 532 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 RPL22P35268 128 aaKnown RBP3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 CD200P41217 278 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 MNDAP41218 407 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 BUD31P41223 144 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 MAGEA2P43356 314 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 GABRA4P48169 554 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 CCR4P51679 360 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 TDGF1P3P51864 188 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 WNT4P56705 351 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 LOXL3P58215 753 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 RAC3P60763 192 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 ZP1P60852 638 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 RPS20P60866 119 aaKnown RBP3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 ARF6P62330 175 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 MC2RQ01718 297 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 TNFRSF17Q02223 184 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 SPOCK1Q08629 439 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 ELP6Q0PNE2 266 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 MAMLD1Q13495 774 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 HLXQ14774 488 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 PGM5Q15124 567 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 RPS6KA2Q15349 733 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 SHHQ15465 462 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 TRAM1Q15629 374 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 MPPED2Q15777 294 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 TSTQ16762 297 aaKnown RBP3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 DUOXA1Q1HG43 343 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 C14orf28Q4W4Y0 310 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 SGO1Q5FBB7 561 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 GLRA4Q5JXX5 417 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 LCE5AQ5TCM9 118 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 ZNF470Q6ECI4 717 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 TBC1D3CQ6IPX1 549 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 TCTN3Q6NUS6 607 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 DENND1BQ6P3S1 775 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 ULK3Q6PHR2 472 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 KLHL24Q6TFL4 600 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 LAYNQ6UX15 382 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 METTL7BQ6UX53 244 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 WASH2PQ6VEQ5 465 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 SLC39A5Q6ZMH5 540 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 PTCHD4Q6ZW05 846 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 ZNF534Q76KX8 674 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 SYT13Q7L8C5 426 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 C5orf24Q7Z6I8 188 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 NAA40Q86UY6 237 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 SLC47A2Q86VL8 602 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 LRRC28Q86X40 367 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 NUDT13Q86X67 352 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 VRK3Q8IV63 474 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 DCUN1D3Q8IWE4 304 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 LAX1Q8IWV1 398 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 GPR135Q8IZ08 494 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 TBC1D3Q8IZP1 549 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 ZNF555Q8NEP9 628 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 BPIFCQ8NFQ6 507 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR9Q2Q8NGE9 314 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR52N4Q8NGI2 321 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR6K3Q8NGY3 331 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR5J2Q8NH18 312 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 BBS10Q8TAM1 723 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 DNAJB14Q8TBM8 379 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 TRMT10AQ8TBZ6 339 aaKnown RBP3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 TMEM163Q8TC26 289 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 ADAMTS17Q8TE56 1095 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 ABHD5Q8WTS1 349 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 APH1BQ8WW43 257 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 HPSE2Q8WWQ2 592 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 ASB13Q8WXK3 278 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR1E3Q8WZA6 343 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 CNOT9Q92600 299 aaKnown RBP3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 LPAR1Q92633 364 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 HIST1H2BAQ96A08 127 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 SLC25A46Q96AG3 418 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 TMEM125Q96AQ2 219 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 PHYHIPLQ96FC7 376 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 MED8Q96G25 268 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 ZNF845Q96IR2 970 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 FCRL1Q96LA6 429 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 YPEL4Q96NS1 127 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 PKMYT1Q99640 499 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 CPNE1Q99829 537 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 PRRT1Q99946 306 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 CPPED1Q9BRF8 314 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 GATA5Q9BWX5 397 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 CDCA4Q9BXL8 241 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 SEC11CQ9BY50 192 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 POLDIP3Q9BY77 421 aaKnown RBP3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 HDHD2Q9H0R4 259 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 MED28Q9H204 178 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 MTIF3Q9H2K0 278 aaKnown RBP3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 MAGIXQ9H6Y5 334 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 SFXN1Q9H9B4 322 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 BRF2Q9HAW0 419 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 SPON1Q9HCB6 807 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 PDE7BQ9NP56 450 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 TREM1Q9NP99 234 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 CHST11Q9NPF2 352 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms