RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 CCDC80Q76M96 950 aa12.74□□□□□ -0.37
SSBP3-208ENST00000444533 P4HA3Q7Z4N8 544 aa12.74□□□□□ -0.37
SSBP3-208ENST00000444533 CHERPQ8IWX8 916 aaKnown RBP12.74□□□□□ -0.37
SSBP3-208ENST00000444533 LILRA2Q8N149 483 aa12.74□□□□□ -0.37
SSBP3-208ENST00000444533 CADM2Q8N3J6 435 aa12.74□□□□□ -0.37
SSBP3-208ENST00000444533 SMYD1Q8NB12 490 aa12.74□□□□□ -0.37
SSBP3-208ENST00000444533 OR10Q1Q8NGQ4 319 aa12.74□□□□□ -0.37
SSBP3-208ENST00000444533 ZPLD1Q8TCW7 415 aa12.74□□□□□ -0.37
SSBP3-208ENST00000444533 SLC25A43Q8WUT9 341 aaPredicted RBP12.74□□□□□ -0.37
SSBP3-208ENST00000444533 FIG4Q92562 907 aa12.74□□□□□ -0.37
SSBP3-208ENST00000444533 RND1Q92730 232 aa12.74□□□□□ -0.37
SSBP3-208ENST00000444533 WDYHV1Q96HA8 205 aa12.74□□□□□ -0.37
SSBP3-208ENST00000444533 TRIB1Q96RU8 372 aa12.74□□□□□ -0.37
SSBP3-208ENST00000444533 CMTM6Q9NX76 183 aa12.74□□□□□ -0.37
SSBP3-208ENST00000444533 ZNF407Q9C0G0 2248 aa12.74□□□□□ -0.37
SSBP3-208ENST00000444533 DNAJC13O75165 2243 aa12.73□□□□□ -0.37
SSBP3-208ENST00000444533 B4DXG7 233 aa12.73□□□□□ -0.37
SSBP3-208ENST00000444533 SHISA8B8ZZ34 492 aa12.73□□□□□ -0.37
SSBP3-208ENST00000444533 SYT5O00445 386 aa12.73□□□□□ -0.37
SSBP3-208ENST00000444533 NME4O00746 187 aa12.73□□□□□ -0.37
SSBP3-208ENST00000444533 EIF1AYO14602 144 aaKnown RBP12.73□□□□□ -0.37
SSBP3-208ENST00000444533 AP3D1O14617 1153 aa12.73□□□□□ -0.37
SSBP3-208ENST00000444533 SYNGR4O95473 234 aa12.73□□□□□ -0.37
SSBP3-208ENST00000444533 STAMBPO95630 424 aa12.73□□□□□ -0.37
SSBP3-208ENST00000444533 IL2RAP01589 272 aa12.73□□□□□ -0.37
SSBP3-208ENST00000444533 OPN1SWP03999 348 aa12.73□□□□□ -0.37
SSBP3-208ENST00000444533 GKN3PP0CG01 181 aa12.73□□□□□ -0.37
SSBP3-208ENST00000444533 ZNF708P17019 499 aa12.73□□□□□ -0.37
SSBP3-208ENST00000444533 CXCR1P25024 350 aa12.73□□□□□ -0.37
SSBP3-208ENST00000444533 SLC1A3P43003 542 aa12.73□□□□□ -0.37
SSBP3-208ENST00000444533 GZMMP51124 257 aa12.73□□□□□ -0.37
SSBP3-208ENST00000444533 POLR2HP52434 150 aaKnown RBP12.73□□□□□ -0.37
SSBP3-208ENST00000444533 MAP2K6P52564 334 aa12.73□□□□□ -0.37
SSBP3-208ENST00000444533 TOMM34Q15785 309 aaPredicted RBP12.73□□□□□ -0.37
SSBP3-208ENST00000444533 TMEM44Q2T9K0 475 aa12.73□□□□□ -0.37
SSBP3-208ENST00000444533 SLC25A53Q5H9E4 307 aa12.73□□□□□ -0.37
SSBP3-208ENST00000444533 PPP4R4Q6NUP7 873 aa12.73□□□□□ -0.37
SSBP3-208ENST00000444533 C8orf82Q6P1X6 216 aaPredicted RBP12.73□□□□□ -0.37
SSBP3-208ENST00000444533 ESPNLQ6ZVH7 1005 aa12.73□□□□□ -0.37
SSBP3-208ENST00000444533 LACC1Q8IV20 430 aa12.73□□□□□ -0.37
SSBP3-208ENST00000444533 DEFB107AQ8IZN7 70 aa12.73□□□□□ -0.37
SSBP3-208ENST00000444533 ARHGAP24Q8N264 748 aa12.73□□□□□ -0.37
SSBP3-208ENST00000444533 CLIP4Q8N3C7 705 aa12.73□□□□□ -0.37
SSBP3-208ENST00000444533 ATP6V1C2Q8NEY4 427 aa12.73□□□□□ -0.37
SSBP3-208ENST00000444533 PHF10Q8WUB8 498 aaKnown RBP12.73□□□□□ -0.37
SSBP3-208ENST00000444533 FAM162AQ96A26 154 aa12.73□□□□□ -0.37
SSBP3-208ENST00000444533 DDIT4LQ96D03 193 aa12.73□□□□□ -0.37
SSBP3-208ENST00000444533 ZNF559Q9BR84 538 aa12.73□□□□□ -0.37
SSBP3-208ENST00000444533 PRRG4Q9BZD6 226 aa12.73□□□□□ -0.37
SSBP3-208ENST00000444533 TRIM2Q9C040 744 aa12.73□□□□□ -0.37
SSBP3-208ENST00000444533 CALHM2Q9HA72 323 aa12.73□□□□□ -0.37
SSBP3-208ENST00000444533 TMEM27Q9HBJ8 222 aa12.73□□□□□ -0.37
SSBP3-208ENST00000444533 TMEM181Q9P2C4 612 aa12.73□□□□□ -0.37
SSBP3-208ENST00000444533 ABCD2Q9UBJ2 740 aa12.73□□□□□ -0.37
SSBP3-208ENST00000444533 TESQ9UGI8 421 aaKnown RBP12.73□□□□□ -0.37
SSBP3-208ENST00000444533 ERRFI1Q9UJM3 462 aaPredicted RBP12.73□□□□□ -0.37
SSBP3-208ENST00000444533 MCTS1Q9ULC4 181 aaKnown RBP12.73□□□□□ -0.37
SSBP3-208ENST00000444533 NCKAP5O14513 1909 aa12.72□□□□□ -0.37
SSBP3-208ENST00000444533 CXCR6O00574 342 aa12.72□□□□□ -0.37
SSBP3-208ENST00000444533 EPPINO95925 133 aa12.72□□□□□ -0.37
SSBP3-208ENST00000444533 TFPIP10646 304 aa12.72□□□□□ -0.37
SSBP3-208ENST00000444533 FCGR2AP12318 317 aa12.72□□□□□ -0.37
SSBP3-208ENST00000444533 IFNA8P32881 189 aa12.72□□□□□ -0.37
SSBP3-208ENST00000444533 KDELR2P33947 212 aa12.72□□□□□ -0.37
SSBP3-208ENST00000444533 SFTPDP35247 375 aa12.72□□□□□ -0.37
SSBP3-208ENST00000444533 EIF1AXP47813 144 aaKnown RBP12.72□□□□□ -0.37
SSBP3-208ENST00000444533 GSK3BP49841 420 aa12.72□□□□□ -0.37
SSBP3-208ENST00000444533 RASSF2P50749 326 aa12.72□□□□□ -0.37
SSBP3-208ENST00000444533 SLC25A3Q00325 362 aa12.72□□□□□ -0.37
SSBP3-208ENST00000444533 PMPCAQ10713 525 aa12.72□□□□□ -0.37
SSBP3-208ENST00000444533 GTF3C1Q12789 2109 aa12.72□□□□□ -0.37
SSBP3-208ENST00000444533 ACSF3Q4G176 576 aaPredicted RBP12.72□□□□□ -0.37
SSBP3-208ENST00000444533 DCST1Q5T197 706 aa12.72□□□□□ -0.37
SSBP3-208ENST00000444533 HBMQ6B0K9 141 aa12.72□□□□□ -0.37
SSBP3-208ENST00000444533 PLEKHM3Q6ZWE6 761 aa12.72□□□□□ -0.37
SSBP3-208ENST00000444533 OR52E4Q8NGH9 312 aa12.72□□□□□ -0.37
SSBP3-208ENST00000444533 RNF217Q8TC41 542 aa12.72□□□□□ -0.37
SSBP3-208ENST00000444533 SSC4DQ8WTU2 575 aa12.72□□□□□ -0.37
SSBP3-208ENST00000444533 KLHL15Q96M94 604 aa12.72□□□□□ -0.37
SSBP3-208ENST00000444533 CDRT15Q96T59 188 aa12.72□□□□□ -0.37
SSBP3-208ENST00000444533 TM9SF2Q99805 663 aa12.72□□□□□ -0.37
SSBP3-208ENST00000444533 TMEM185BQ9H7F4 350 aa12.72□□□□□ -0.37
SSBP3-208ENST00000444533 CHRNA9Q9UGM1 479 aa12.72□□□□□ -0.37
SSBP3-208ENST00000444533 RPS6KA6Q9UK32 745 aa12.72□□□□□ -0.37
SSBP3-208ENST00000444533 POLEQ07864 2286 aa12.71□□□□□ -0.37
SSBP3-208ENST00000444533 CD8B2A6NJW9 211 aa12.71□□□□□ -0.37
SSBP3-208ENST00000444533 ETV2O00321 342 aaPredicted RBP12.71□□□□□ -0.37
SSBP3-208ENST00000444533 BCAS1O75363 584 aaPredicted RBP12.71□□□□□ -0.37
SSBP3-208ENST00000444533 HTR1EP28566 365 aa12.71□□□□□ -0.37
SSBP3-208ENST00000444533 KCNJ5P48544 419 aa12.71□□□□□ -0.37
SSBP3-208ENST00000444533 CLK1P49759 484 aaKnown RBP12.71□□□□□ -0.37
SSBP3-208ENST00000444533 CLDN15P56746 228 aa12.71□□□□□ -0.37
SSBP3-208ENST00000444533 CLDN18P56856 261 aa12.71□□□□□ -0.37
SSBP3-208ENST00000444533 CARD18P57730 90 aa12.71□□□□□ -0.37
SSBP3-208ENST00000444533 CSNK2A1P68400 391 aaPredicted RBP12.71□□□□□ -0.37
SSBP3-208ENST00000444533 DMTNQ08495 405 aa12.71□□□□□ -0.37
SSBP3-208ENST00000444533 TMEM176BQ3YBM2 270 aaPredicted RBP12.71□□□□□ -0.37
SSBP3-208ENST00000444533 EMC4Q5J8M3 183 aa12.71□□□□□ -0.37
SSBP3-208ENST00000444533 NSUN5P2Q63ZY6 315 aa12.71□□□□□ -0.37
SSBP3-208ENST00000444533 GTF2IRD2BQ6EKJ0 949 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms