RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 FAM214BQ7L5A3 538 aa16.7■□□□□ 0.26
CCDC188-202ENST00000444532 GTF2IRD2Q86UP8 949 aa16.7■□□□□ 0.26
CCDC188-202ENST00000444532 PEX5LQ8IYB4 626 aa16.7■□□□□ 0.26
CCDC188-202ENST00000444532 FAM222BQ8WU58 562 aa16.7■□□□□ 0.26
CCDC188-202ENST00000444532 THOC1Q96FV9 657 aaKnown RBP16.7■□□□□ 0.26
CCDC188-202ENST00000444532 GMPPAQ96IJ6 420 aaPredicted RBP16.7■□□□□ 0.26
CCDC188-202ENST00000444532 SERINC1Q9NRX5 453 aa16.7■□□□□ 0.26
CCDC188-202ENST00000444532 GLRX2Q9NS18 164 aa16.7■□□□□ 0.26
CCDC188-202ENST00000444532 ACER3Q9NUN7 267 aa16.7■□□□□ 0.26
CCDC188-202ENST00000444532 ATP8B1O43520 1251 aa16.69■□□□□ 0.26
CCDC188-202ENST00000444532 PABPC4LP0CB38 370 aaKnown RBP16.69■□□□□ 0.26
CCDC188-202ENST00000444532 NID1P14543 1247 aa16.69■□□□□ 0.26
CCDC188-202ENST00000444532 PPIBP23284 216 aaKnown RBP16.69■□□□□ 0.26
CCDC188-202ENST00000444532 SHC1P29353 583 aa16.69■□□□□ 0.26
CCDC188-202ENST00000444532 SNTB1Q13884 538 aaKnown RBP16.69■□□□□ 0.26
CCDC188-202ENST00000444532 RGNQ15493 299 aa16.69■□□□□ 0.26
CCDC188-202ENST00000444532 MAPK11Q15759 364 aa16.69■□□□□ 0.26
CCDC188-202ENST00000444532 PPP4R4Q6NUP7 873 aa16.69■□□□□ 0.26
CCDC188-202ENST00000444532 C3orf33Q6P1S2 294 aa16.69■□□□□ 0.26
CCDC188-202ENST00000444532 VWA1Q6PCB0 445 aa16.69■□□□□ 0.26
CCDC188-202ENST00000444532 BTLAQ7Z6A9 289 aa16.69■□□□□ 0.26
CCDC188-202ENST00000444532 HMGN2P46Q86SG4 172 aa16.69■□□□□ 0.26
CCDC188-202ENST00000444532 SLC38A5Q8WUX1 472 aa16.69■□□□□ 0.26
CCDC188-202ENST00000444532 WDR60Q8WVS4 1066 aa16.69■□□□□ 0.26
CCDC188-202ENST00000444532 CPNE4Q96A23 557 aaPredicted RBP16.69■□□□□ 0.26
CCDC188-202ENST00000444532 GALNT8Q9NY28 637 aa16.69■□□□□ 0.26
CCDC188-202ENST00000444532 CRIM1Q9NZV1 1036 aa16.69■□□□□ 0.26
CCDC188-202ENST00000444532 PRDM4Q9UKN5 801 aa16.69■□□□□ 0.26
CCDC188-202ENST00000444532 DSPPQ9NZW4 1301 aa16.69■□□□□ 0.26
CCDC188-202ENST00000444532 A0A0G2JND7 137 aa16.68■□□□□ 0.26
CCDC188-202ENST00000444532 A0A0G2JPF8 293 aa16.68■□□□□ 0.26
CCDC188-202ENST00000444532 A0A1W2PP18 115 aa16.68■□□□□ 0.26
CCDC188-202ENST00000444532 TUBAL3A6NHL2 446 aa16.68■□□□□ 0.26
CCDC188-202ENST00000444532 CLDN24A6NM45 220 aa16.68■□□□□ 0.26
CCDC188-202ENST00000444532 HNRNPCL2B2RXH8 293 aa16.68■□□□□ 0.26
CCDC188-202ENST00000444532 HNRNPCL3B7ZW38 293 aa16.68■□□□□ 0.26
CCDC188-202ENST00000444532 HNRNPCL1O60812 293 aaKnown RBP16.68■□□□□ 0.26
CCDC188-202ENST00000444532 BCAS1O75363 584 aaPredicted RBP16.68■□□□□ 0.26
CCDC188-202ENST00000444532 SMNDC1O75940 238 aaKnown RBP eCLIP16.68■□□□□ 0.26
CCDC188-202ENST00000444532 PLGP00747 810 aaPredicted RBP16.68■□□□□ 0.26
CCDC188-202ENST00000444532 CGAP01215 116 aa16.68■□□□□ 0.26
CCDC188-202ENST00000444532 BCHEP06276 602 aa16.68■□□□□ 0.26
CCDC188-202ENST00000444532 HNRNPCL4P0DMR1 293 aa16.68■□□□□ 0.26
CCDC188-202ENST00000444532 CD8BP10966 210 aa16.68■□□□□ 0.26
CCDC188-202ENST00000444532 BMP2P12643 396 aa16.68■□□□□ 0.26
CCDC188-202ENST00000444532 APOBEC1P41238 236 aaKnown RBP16.68■□□□□ 0.26
CCDC188-202ENST00000444532 MERTKQ12866 999 aa16.68■□□□□ 0.26
CCDC188-202ENST00000444532 PAGE3Q5JUK9 113 aa16.68■□□□□ 0.26
CCDC188-202ENST00000444532 PLEKHM3Q6ZWE6 761 aa16.68■□□□□ 0.26
CCDC188-202ENST00000444532 ZZZ3Q8IYH5 903 aa16.68■□□□□ 0.26
CCDC188-202ENST00000444532 ATP6V1C2Q8NEY4 427 aa16.68■□□□□ 0.26
CCDC188-202ENST00000444532 ZNF563Q8TA94 476 aa16.68■□□□□ 0.26
CCDC188-202ENST00000444532 CNOT9Q92600 299 aaKnown RBP16.68■□□□□ 0.26
CCDC188-202ENST00000444532 REXO5Q96IC2 774 aaKnown RBP16.68■□□□□ 0.26
CCDC188-202ENST00000444532 ZNF385DQ9H6B1 395 aa16.68■□□□□ 0.26
CCDC188-202ENST00000444532 MED4Q9NPJ6 270 aa16.68■□□□□ 0.26
CCDC188-202ENST00000444532 EMC9Q9Y3B6 208 aa16.68■□□□□ 0.26
CCDC188-202ENST00000444532 GMEB1Q9Y692 573 aa16.68■□□□□ 0.26
CCDC188-202ENST00000444532 PDZD2O15018 2839 aa16.68■□□□□ 0.26
CCDC188-202ENST00000444532 SS18L1O75177 396 aaPredicted RBP16.67■□□□□ 0.26
CCDC188-202ENST00000444532 FKBP2P26885 142 aaKnown RBP16.67■□□□□ 0.26
CCDC188-202ENST00000444532 SLC7A1P30825 629 aa16.67■□□□□ 0.26
CCDC188-202ENST00000444532 RYKP34925 604 aa16.67■□□□□ 0.26
CCDC188-202ENST00000444532 CTBP2P56545 445 aa16.67■□□□□ 0.26
CCDC188-202ENST00000444532 SIRPAP78324 504 aa16.67■□□□□ 0.26
CCDC188-202ENST00000444532 PLAURQ03405 335 aa16.67■□□□□ 0.26
CCDC188-202ENST00000444532 ZNF239Q16600 458 aaKnown RBP16.67■□□□□ 0.26
CCDC188-202ENST00000444532 ZSWIM7Q19AV6 140 aa16.67■□□□□ 0.26
CCDC188-202ENST00000444532 PRAMEF8Q5VWM4 474 aa16.67■□□□□ 0.26
CCDC188-202ENST00000444532 PRAMEF7Q5VXH5 474 aa16.67■□□□□ 0.26
CCDC188-202ENST00000444532 ZNF440Q8IYI8 595 aa16.67■□□□□ 0.26
CCDC188-202ENST00000444532 OR52P1PQ8NH57 321 aa16.67■□□□□ 0.26
CCDC188-202ENST00000444532 SLC25A43Q8WUT9 341 aaPredicted RBP16.67■□□□□ 0.26
CCDC188-202ENST00000444532 SLC39A3Q9BRY0 314 aa16.67■□□□□ 0.26
CCDC188-202ENST00000444532 A4GALTQ9NPC4 353 aa16.67■□□□□ 0.26
CCDC188-202ENST00000444532 DNAJB12Q9NXW2 375 aaKnown RBP16.67■□□□□ 0.26
CCDC188-202ENST00000444532 ELOVL5Q9NYP7 299 aa16.67■□□□□ 0.26
CCDC188-202ENST00000444532 SLC25A37Q9NYZ2 338 aa16.67■□□□□ 0.26
CCDC188-202ENST00000444532 SLAMF8Q9P0V8 285 aa16.67■□□□□ 0.26
CCDC188-202ENST00000444532 ZNF232Q9UNY5 417 aa16.67■□□□□ 0.26
CCDC188-202ENST00000444532 FAAHO00519 579 aa16.66■□□□□ 0.26
CCDC188-202ENST00000444532 TROVE2P10155 538 aaKnown RBP eCLIP16.66■□□□□ 0.26
CCDC188-202ENST00000444532 EPXP11678 715 aa16.66■□□□□ 0.26
CCDC188-202ENST00000444532 HTR3AP46098 478 aa16.66■□□□□ 0.26
CCDC188-202ENST00000444532 KRTAP10-9P60411 292 aa16.66■□□□□ 0.26
CCDC188-202ENST00000444532 RAC3P60763 192 aa16.66■□□□□ 0.26
CCDC188-202ENST00000444532 DAZAP2Q15038 168 aaPredicted RBP16.66■□□□□ 0.26
CCDC188-202ENST00000444532 RNPS1Q15287 305 aaKnown RBP16.66■□□□□ 0.26
CCDC188-202ENST00000444532 LIN52Q52LA3 116 aa16.66■□□□□ 0.26
CCDC188-202ENST00000444532 MRPL2Q5T653 305 aaKnown RBP16.66■□□□□ 0.26
CCDC188-202ENST00000444532 GRINAQ7Z429 371 aa16.66■□□□□ 0.26
CCDC188-202ENST00000444532 MSRB3Q8IXL7 192 aa16.66■□□□□ 0.26
CCDC188-202ENST00000444532 OR6K3Q8NGY3 331 aa16.66■□□□□ 0.26
CCDC188-202ENST00000444532 TSPEARQ8WU66 669 aa16.66■□□□□ 0.26
CCDC188-202ENST00000444532 ROBO4Q8WZ75 1007 aa16.66■□□□□ 0.26
CCDC188-202ENST00000444532 TMEM19Q96HH6 336 aa16.66■□□□□ 0.26
CCDC188-202ENST00000444532 CCDC106Q9BWC9 280 aa16.66■□□□□ 0.26
CCDC188-202ENST00000444532 SRXN1Q9BYN0 137 aa16.66■□□□□ 0.26
CCDC188-202ENST00000444532 COQ10BQ9H8M1 238 aa16.66■□□□□ 0.26
CCDC188-202ENST00000444532 BCL2L10Q9HD36 194 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms