RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 M0R1B8 84 aa12.61□□□□□ -0.39
HMGN1-208ENST00000443046 NUDT14O95848 222 aa12.61□□□□□ -0.39
HMGN1-208ENST00000443046 TGFAP01135 160 aa12.61□□□□□ -0.39
HMGN1-208ENST00000443046 ZNF23P17027 643 aa12.61□□□□□ -0.39
HMGN1-208ENST00000443046 ITGA2P17301 1181 aa12.61□□□□□ -0.39
HMGN1-208ENST00000443046 FOXG1P55316 489 aaPredicted RBP12.61□□□□□ -0.39
HMGN1-208ENST00000443046 PHC1P78364 1004 aa12.61□□□□□ -0.39
HMGN1-208ENST00000443046 NDUFAF6Q330K2 333 aa12.61□□□□□ -0.39
HMGN1-208ENST00000443046 OR7E24Q6IFN5 339 aa12.61□□□□□ -0.39
HMGN1-208ENST00000443046 TIFABQ6ZNK6 161 aa12.61□□□□□ -0.39
HMGN1-208ENST00000443046 LCA5Q86VQ0 697 aa12.61□□□□□ -0.39
HMGN1-208ENST00000443046 ZFP28Q8NHY6 868 aa12.61□□□□□ -0.39
HMGN1-208ENST00000443046 CDS1Q92903 461 aa12.61□□□□□ -0.39
HMGN1-208ENST00000443046 FAM120BQ96EK7 910 aaKnown RBP12.61□□□□□ -0.39
HMGN1-208ENST00000443046 FCRL1Q96LA6 429 aa12.61□□□□□ -0.39
HMGN1-208ENST00000443046 SORCS2Q96PQ0 1159 aa12.61□□□□□ -0.39
HMGN1-208ENST00000443046 IQCGQ9H095 443 aaKnown RBP12.61□□□□□ -0.39
HMGN1-208ENST00000443046 CDC42EP4Q9H3Q1 356 aaKnown RBP12.61□□□□□ -0.39
HMGN1-208ENST00000443046 PIGUQ9H490 435 aa12.61□□□□□ -0.39
HMGN1-208ENST00000443046 MID1IP1Q9NPA3 183 aa12.61□□□□□ -0.39
HMGN1-208ENST00000443046 SIRT3Q9NTG7 399 aaPredicted RBP12.61□□□□□ -0.39
HMGN1-208ENST00000443046 TAS2R16Q9NYV7 291 aa12.61□□□□□ -0.39
HMGN1-208ENST00000443046 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.61□□□□□ -0.392e-11■■■■■ 38.2
HMGN1-208ENST00000443046 NUP214P35658 2090 aaPredicted RBP12.6□□□□□ -0.39
HMGN1-208ENST00000443046 CIB4A0PJX0 185 aa12.6□□□□□ -0.39
HMGN1-208ENST00000443046 EIF4E2O60573 245 aaKnown RBP12.6□□□□□ -0.39
HMGN1-208ENST00000443046 IGHV3-9P01782 118 aa12.6□□□□□ -0.39
HMGN1-208ENST00000443046 HMGN2P05204 90 aaKnown RBP12.6□□□□□ -0.39
HMGN1-208ENST00000443046 ITGA5P08648 1049 aa12.6□□□□□ -0.39
HMGN1-208ENST00000443046 DIO1P49895 249 aa12.6□□□□□ -0.39
HMGN1-208ENST00000443046 RNF144AP50876 292 aaPredicted RBP12.6□□□□□ -0.39
HMGN1-208ENST00000443046 ATP12AP54707 1039 aa12.6□□□□□ -0.39
HMGN1-208ENST00000443046 MLC1Q15049 377 aa12.6□□□□□ -0.39
HMGN1-208ENST00000443046 QPRTQ15274 297 aa12.6□□□□□ -0.39
HMGN1-208ENST00000443046 IMPG1Q17R60 797 aa12.6□□□□□ -0.39
HMGN1-208ENST00000443046 ZSWIM7Q19AV6 140 aa12.6□□□□□ -0.39
HMGN1-208ENST00000443046 C1QTNF12Q5T7M4 302 aa12.6□□□□□ -0.39
HMGN1-208ENST00000443046 C3orf33Q6P1S2 294 aa12.6□□□□□ -0.39
HMGN1-208ENST00000443046 TMPPEQ6ZT21 453 aa12.6□□□□□ -0.39
HMGN1-208ENST00000443046 ZNF572Q7Z3I7 529 aaPredicted RBP12.6□□□□□ -0.39
HMGN1-208ENST00000443046 MTDHQ86UE4 582 aaKnown RBP12.6□□□□□ -0.39
HMGN1-208ENST00000443046 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.6□□□□□ -0.39
HMGN1-208ENST00000443046 ZNF527Q8NB42 609 aa12.6□□□□□ -0.39
HMGN1-208ENST00000443046 OR5W2Q8NH69 310 aa12.6□□□□□ -0.39
HMGN1-208ENST00000443046 APH1AQ96BI3 265 aa12.6□□□□□ -0.39
HMGN1-208ENST00000443046 OR5B2Q96R09 309 aa12.6□□□□□ -0.39
HMGN1-208ENST00000443046 C1QTNF6Q9BXI9 259 aa12.6□□□□□ -0.39
HMGN1-208ENST00000443046 REEP4Q9H6H4 257 aa12.6□□□□□ -0.39
HMGN1-208ENST00000443046 FKRPQ9H9S5 495 aa12.6□□□□□ -0.39
HMGN1-208ENST00000443046 TNFRSF12AQ9NP84 129 aa12.6□□□□□ -0.39
HMGN1-208ENST00000443046 MYOZ1Q9NP98 299 aaPredicted RBP12.6□□□□□ -0.39
HMGN1-208ENST00000443046 RRAGDQ9NQL2 400 aaPredicted RBP12.6□□□□□ -0.39
HMGN1-208ENST00000443046 ASB6Q9NWX5 421 aa12.6□□□□□ -0.39
HMGN1-208ENST00000443046 EMC3Q9P0I2 261 aa12.6□□□□□ -0.39
HMGN1-208ENST00000443046 DTNAQ9Y4J8 743 aa12.6□□□□□ -0.39
HMGN1-208ENST00000443046 ATP23Q9Y6H3 246 aa12.6□□□□□ -0.39
HMGN1-208ENST00000443046 NPIPA5A0A0B4J1W7 369 aa12.59□□□□□ -0.39
HMGN1-208ENST00000443046 CCT8L1PA6NM43 557 aa12.59□□□□□ -0.39
HMGN1-208ENST00000443046 NPIPA7E9PJI5 369 aa12.59□□□□□ -0.39
HMGN1-208ENST00000443046 POC1B-GALNT4F8VUJ3 575 aa12.59□□□□□ -0.39
HMGN1-208ENST00000443046 H3BNH8 94 aa12.59□□□□□ -0.39
HMGN1-208ENST00000443046 KIAA0513O60268 411 aa12.59□□□□□ -0.39
HMGN1-208ENST00000443046 SEC22BO75396 215 aa12.59□□□□□ -0.39
HMGN1-208ENST00000443046 SNRPAP09012 282 aaKnown RBP12.59□□□□□ -0.39
HMGN1-208ENST00000443046 NPIPA8P0DM63 369 aa12.59□□□□□ -0.39
HMGN1-208ENST00000443046 SLC16A1P53985 500 aa12.59□□□□□ -0.39
HMGN1-208ENST00000443046 SLC25A3Q00325 362 aa12.59□□□□□ -0.39
HMGN1-208ENST00000443046 SLC7A5Q01650 507 aa12.59□□□□□ -0.39
HMGN1-208ENST00000443046 TIGD2Q4W5G0 525 aa12.59□□□□□ -0.39
HMGN1-208ENST00000443046 C12orf54Q6X4T0 127 aa12.59□□□□□ -0.39
HMGN1-208ENST00000443046 UBE2J2Q8N2K1 259 aa12.59□□□□□ -0.39
HMGN1-208ENST00000443046 TOR1AIP2Q8NFQ8 470 aa12.59□□□□□ -0.39
HMGN1-208ENST00000443046 PPCDCQ96CD2 204 aa12.59□□□□□ -0.39
HMGN1-208ENST00000443046 CCT7Q99832 543 aa12.59□□□□□ -0.39
HMGN1-208ENST00000443046 NOSIPQ9Y314 301 aaKnown RBP12.59□□□□□ -0.39
HMGN1-208ENST00000443046 TRAF6Q9Y4K3 522 aa12.59□□□□□ -0.39
HMGN1-208ENST00000443046 FKBP7Q9Y680 259 aa12.59□□□□□ -0.39
HMGN1-208ENST00000443046 KCNE3Q9Y6H6 103 aa12.59□□□□□ -0.39
HMGN1-208ENST00000443046 ATP6V1G2-DDX39BF2Z307 99 aa12.58□□□□□ -0.4
HMGN1-208ENST00000443046 H3BQF6 201 aa12.58□□□□□ -0.4
HMGN1-208ENST00000443046 GTPBP1O00178 669 aaKnown RBP12.58□□□□□ -0.4
HMGN1-208ENST00000443046 ZNF264O43296 627 aa12.58□□□□□ -0.4
HMGN1-208ENST00000443046 KCNAB3O43448 404 aa12.58□□□□□ -0.4
HMGN1-208ENST00000443046 EGR1P18146 543 aa12.58□□□□□ -0.4
HMGN1-208ENST00000443046 SDC1P18827 310 aa12.58□□□□□ -0.4
HMGN1-208ENST00000443046 ATP6V1C1P21283 382 aa12.58□□□□□ -0.4
HMGN1-208ENST00000443046 GCAP28676 217 aa12.58□□□□□ -0.4
HMGN1-208ENST00000443046 COMPP49747 757 aaPredicted RBP12.58□□□□□ -0.4
HMGN1-208ENST00000443046 CSNK2A1P68400 391 aaPredicted RBP12.58□□□□□ -0.4
HMGN1-208ENST00000443046 CBFBQ13951 182 aa12.58□□□□□ -0.4
HMGN1-208ENST00000443046 LASP1Q14847 261 aaKnown RBP12.58□□□□□ -0.4
HMGN1-208ENST00000443046 DCST2Q5T1A1 773 aa12.58□□□□□ -0.4
HMGN1-208ENST00000443046 CDC73Q6P1J9 531 aa12.58□□□□□ -0.4
HMGN1-208ENST00000443046 SZRD1Q7Z422 152 aa12.58□□□□□ -0.4
HMGN1-208ENST00000443046 C17orf78Q8N4C9 275 aa12.58□□□□□ -0.4
HMGN1-208ENST00000443046 ZNF540Q8NDQ6 660 aa12.58□□□□□ -0.4
HMGN1-208ENST00000443046 C1orf162Q8NEQ5 155 aaPredicted RBP12.58□□□□□ -0.4
HMGN1-208ENST00000443046 ZFAND2BQ8WV99 257 aa12.58□□□□□ -0.4
HMGN1-208ENST00000443046 ST8SIA1Q92185 356 aa12.58□□□□□ -0.4
HMGN1-208ENST00000443046 C3orf49Q96BT1 292 aa12.58□□□□□ -0.4
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