RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 ADGRL3Q9HAR2 1447 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 ANKHQ9HCJ1 492 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 CNGB3Q9NQW8 809 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 SIRT7Q9NRC8 400 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 RNF146Q9NTX7 359 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 C1orf123Q9NWV4 160 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 TECRQ9NZ01 308 aaKnown RBP3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 PRG3Q9Y2Y8 225 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 NSG2Q9Y328 171 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 LOXL2Q9Y4K0 774 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 MMP24Q9Y5R2 645 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 MRPS18BQ9Y676 258 aaKnown RBP3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 V9GYQ6 96 aa3.23□□□□□ -1.89
HMGB1P12-201ENST00000438594 TRBV5-7A0A0A0MS05 114 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 A0A1W2PQL4 384 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 GOLGA6L10A6NI86 522 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 SRRM4A7MD48 611 aaKnown RBP3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 TMEM114B3SHH9 223 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 POC1B-GALNT4F8VUJ3 575 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 M0R3G1 203 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 CCL24O00175 119 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 CLIC1O00299 241 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 PRKAB2O43741 272 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 SYNGR3O43761 229 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 PCDH7O60245 1069 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 N4BP1O75113 896 aaKnown RBP3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 PRKRAO75569 313 aaKnown RBP3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 ZMPSTE24O75844 475 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 NEURL1O76050 574 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 JTBO76095 146 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 SNAPINO95295 136 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 TMEM50AO95807 157 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 F10P00742 488 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 IGF1P05019 195 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 GNAO1P09471 354 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 MYL2P10916 166 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 UNGP13051 313 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 CD59P13987 128 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 CBR1P16152 277 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 ENGP17813 658 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 BCKDHBP21953 392 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 CCNE1P24864 410 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 HTR2CP28335 458 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 EPHA2P29317 976 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 OR1E1P30953 314 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 CALCRP30988 508 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 STX2P32856 288 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 PCK1P35558 622 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 PPP3CCP48454 512 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 KPNA2P52292 529 aaKnown RBP3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 ERVK-8P63133 956 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 KCNJ2P63252 427 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 FAM27E3Q08E93 113 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 ZNF415Q09FC8 603 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 CTTNQ14247 550 aaKnown RBP3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 KRT81Q14533 505 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 KCTD19Q17RG1 926 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 KLHL38Q2WGJ6 581 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 TMEM249Q2WGJ8 235 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 HLA-BQ31612 363 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 NDUFAF6Q330K2 333 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 COX19Q49B96 90 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 GPR33Q49SQ1 333 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 YIF1BQ5BJH7 314 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 ZNF542PQ5EBM4 170 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 RNASE12Q5GAN4 147 aaKnown RBP3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 SAMD4BQ5PRF9 694 aaKnown RBP3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 BEND3Q5T5X7 828 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 DENND2CQ68D51 928 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 C22orf42Q6IC83 251 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 RTL6Q6ICC9 239 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 ADAM5Q6NVV9 412 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 ARMCX5Q6P1M9 558 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 PAQR6Q6TCH4 344 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 ZNF562Q6V9R5 426 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 GDPD4Q6W3E5 623 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 Q6ZSR3 168 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 FCRLAQ7L513 359 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 SLC29A4Q7RTT9 530 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 GPBP1Q86WP2 473 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 COMMD2Q86X83 199 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 MARCH9Q86YJ5 346 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 HPS6Q86YV9 775 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 ERI1Q8IV48 349 aaKnown RBP3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 SFTPA2Q8IWL1 248 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 SFTPA1Q8IWL2 248 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 ZNF444Q8N0Y2 327 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 RNF149Q8NC42 400 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 CCDC112Q8NEF3 446 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 OR2L2Q8NH16 312 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 PRSS3P2Q8NHM4 247 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 HMGCLL1Q8TB92 370 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 LGALS14Q8TCE9 139 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 LRRC15Q8TF66 581 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 SLC35F5Q8WV83 523 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 RNF133Q8WVZ7 376 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 TM9SF4Q92544 642 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 MYLPFQ96A32 169 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 NTAN1Q96AB6 310 aa3.22□□□□□ -1.89
HMGB1P12-201ENST00000438594 FKBP10Q96AY3 582 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms