RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 SMAP2Q8WU79 429 aaPredicted RBP12.63□□□□□ -0.39
SMARCE1-205ENST00000431889 SLC35G5Q96KT7 338 aa12.63□□□□□ -0.39
SMARCE1-205ENST00000431889 OR51I1Q9H343 314 aa12.63□□□□□ -0.39
SMARCE1-205ENST00000431889 ATAD3AQ9NVI7 634 aa12.63□□□□□ -0.39
SMARCE1-205ENST00000431889 MKS1Q9NXB0 559 aa12.63□□□□□ -0.39
SMARCE1-205ENST00000431889 LIPT1Q9Y234 373 aa12.63□□□□□ -0.39
SMARCE1-205ENST00000431889 SERINC4A6NH21 518 aa12.62□□□□□ -0.39
SMARCE1-205ENST00000431889 GJE1A6NN92 205 aa12.62□□□□□ -0.39
SMARCE1-205ENST00000431889 ADAM11O75078 769 aa12.62□□□□□ -0.39
SMARCE1-205ENST00000431889 UGT2B17O75795 530 aa12.62□□□□□ -0.39
SMARCE1-205ENST00000431889 HSPA4LO95757 839 aa12.62□□□□□ -0.39
SMARCE1-205ENST00000431889 FESP07332 822 aa12.62□□□□□ -0.39
SMARCE1-205ENST00000431889 OR12D1P0DN82 309 aa12.62□□□□□ -0.39
SMARCE1-205ENST00000431889 TFPIP10646 304 aa12.62□□□□□ -0.39
SMARCE1-205ENST00000431889 DDX5P17844 614 aaKnown RBP12.62□□□□□ -0.39
SMARCE1-205ENST00000431889 ELK4P28324 431 aa12.62□□□□□ -0.39
SMARCE1-205ENST00000431889 LCN1P31025 176 aa12.62□□□□□ -0.39
SMARCE1-205ENST00000431889 RPL3P39023 403 aaKnown RBP12.62□□□□□ -0.39
SMARCE1-205ENST00000431889 SESN3P58005 492 aa12.62□□□□□ -0.39
SMARCE1-205ENST00000431889 SPOCK1Q08629 439 aa12.62□□□□□ -0.39
SMARCE1-205ENST00000431889 SELENBP1Q13228 472 aa12.62□□□□□ -0.39
SMARCE1-205ENST00000431889 SKP2Q13309 424 aa12.62□□□□□ -0.39
SMARCE1-205ENST00000431889 CBFBQ13951 182 aa12.62□□□□□ -0.39
SMARCE1-205ENST00000431889 SEZ6L2Q6UXD5 910 aa12.62□□□□□ -0.39
SMARCE1-205ENST00000431889 PSMA8Q8TAA3 256 aa12.62□□□□□ -0.39
SMARCE1-205ENST00000431889 ZNF75CPQ92670 426 aaPredicted RBP12.62□□□□□ -0.39
SMARCE1-205ENST00000431889 FBXW5Q969U6 566 aa12.62□□□□□ -0.39
SMARCE1-205ENST00000431889 ZG16BQ96DA0 208 aa12.62□□□□□ -0.39
SMARCE1-205ENST00000431889 C1QTNF6Q9BXI9 259 aa12.62□□□□□ -0.39
SMARCE1-205ENST00000431889 BHLHE41Q9C0J9 482 aaPredicted RBP12.62□□□□□ -0.39
SMARCE1-205ENST00000431889 C20orf27Q9GZN8 174 aa12.62□□□□□ -0.39
SMARCE1-205ENST00000431889 HOXD1Q9GZZ0 328 aa12.62□□□□□ -0.39
SMARCE1-205ENST00000431889 PPCSQ9HAB8 311 aa12.62□□□□□ -0.39
SMARCE1-205ENST00000431889 FANCFQ9NPI8 374 aa12.62□□□□□ -0.39
SMARCE1-205ENST00000431889 CADP27708 2225 aa12.62□□□□□ -0.39
SMARCE1-205ENST00000431889 A0A1W2PP18 115 aa12.61□□□□□ -0.39
SMARCE1-205ENST00000431889 CSTAP01040 98 aa12.61□□□□□ -0.39
SMARCE1-205ENST00000431889 DANCRP0C864 163 aa12.61□□□□□ -0.39
SMARCE1-205ENST00000431889 PABPC4LP0CB38 370 aaKnown RBP12.61□□□□□ -0.39
SMARCE1-205ENST00000431889 PRPS1L1P21108 318 aa12.61□□□□□ -0.39
SMARCE1-205ENST00000431889 IGHV1-2P23083 117 aa12.61□□□□□ -0.39
SMARCE1-205ENST00000431889 ADH6P28332 368 aa12.61□□□□□ -0.39
SMARCE1-205ENST00000431889 FOXG1P55316 489 aaPredicted RBP12.61□□□□□ -0.39
SMARCE1-205ENST00000431889 ITGADQ13349 1161 aa12.61□□□□□ -0.39
SMARCE1-205ENST00000431889 PGGHGQ32M88 737 aa12.61□□□□□ -0.39
SMARCE1-205ENST00000431889 ZNF672Q499Z4 452 aaPredicted RBP12.61□□□□□ -0.39
SMARCE1-205ENST00000431889 C9orf135Q5VTT2 229 aa12.61□□□□□ -0.39
SMARCE1-205ENST00000431889 C16orf62Q7Z3J2 963 aa12.61□□□□□ -0.39
SMARCE1-205ENST00000431889 SFXN5Q8TD22 340 aa12.61□□□□□ -0.39
SMARCE1-205ENST00000431889 XAGE5Q8WWM1 108 aa12.61□□□□□ -0.39
SMARCE1-205ENST00000431889 MRGPRX4Q96LA9 322 aa12.61□□□□□ -0.39
SMARCE1-205ENST00000431889 PRPF18Q99633 342 aaKnown RBP12.61□□□□□ -0.39
SMARCE1-205ENST00000431889 OR11A1Q9GZK7 315 aa12.61□□□□□ -0.39
SMARCE1-205ENST00000431889 ESRP2Q9H6T0 727 aaKnown RBP12.61□□□□□ -0.39
SMARCE1-205ENST00000431889 AKTIPQ9H8T0 292 aa12.61□□□□□ -0.39
SMARCE1-205ENST00000431889 NPAP1Q9NZP6 1156 aa12.61□□□□□ -0.39
SMARCE1-205ENST00000431889 HIVEP2P31629 2446 aa12.61□□□□□ -0.39
SMARCE1-205ENST00000431889 RAD51DO75771 328 aa12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 IGHV4-39P01824 125 aa12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 NTF4P34130 210 aa12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 OR3A2P47893 321 aa12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 DIO1P49895 249 aa12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 SUMO3P55854 103 aaPredicted RBP12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 RAC3P60763 192 aa12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 PHC1P78364 1004 aa12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 CHRNEQ04844 493 aa12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 FUT5Q11128 374 aa12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 CHI3L2Q15782 390 aa12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 NUDCD3Q8IVD9 361 aa12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 CCDC103Q8IW40 242 aa12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 UBE2J2Q8N2K1 259 aa12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 EIF1ADQ8N9N8 165 aaKnown RBP12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 OR52N5Q8NH56 324 aa12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 HSD17B8Q92506 261 aa12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 HDHD5Q9BXW7 423 aa12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 CTPS2Q9NRF8 586 aa12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 LGALS13Q9UHV8 139 aa12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 ACTL7BQ9Y614 415 aa12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 SULT2B1O00204 365 aa12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 CYTIPO60759 359 aa12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 STX11O75558 287 aa12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 KRT16P08779 473 aa12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 CLDN8P56748 225 aa12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 PPA1Q15181 289 aa12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 C3orf33Q6P1S2 294 aa12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 ZNF100Q8IYN0 542 aa12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 ZNF563Q8TA94 476 aa12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 PIWIL2Q8TC59 973 aaKnown RBP12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 TRIM44Q96DX7 344 aaPredicted RBP12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 ARL5BQ96KC2 179 aa12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 LAT2Q9GZY6 243 aa12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 BCO1Q9HAY6 547 aa12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 CISD1Q9NZ45 108 aaKnown RBP12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 KLHL9Q9P2J3 617 aa12.6□□□□□ -0.39
SMARCE1-205ENST00000431889 CHD3Q12873 2000 aaKnown RBP12.59□□□□□ -0.39
SMARCE1-205ENST00000431889 ALPK2Q86TB3 2170 aa12.59□□□□□ -0.39
SMARCE1-205ENST00000431889 RTTNQ86VV8 2226 aa12.59□□□□□ -0.39
SMARCE1-205ENST00000431889 PRAMEF27A3QJZ7 478 aa12.59□□□□□ -0.39
SMARCE1-205ENST00000431889 OVOL3O00110 214 aa12.59□□□□□ -0.39
SMARCE1-205ENST00000431889 AP3D1O14617 1153 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms