RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 SCML4Q8N228 414 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 OR5W2Q8NH69 310 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 LGALS12Q96DT0 336 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 DEFB127Q9H1M4 99 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 MAGIXQ9H6Y5 334 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 PLEKHJ1Q9NW61 149 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 PTBP2Q9UKA9 531 aaKnown RBP9.08□□□□□ -0.96
SNX13-203ENST00000428135 CBX7O95931 251 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 ZNF44P15621 663 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 GSTM2P28161 218 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 NKX3-2P78367 333 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 KCNJ10P78508 379 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 C6orf89Q6UWU4 347 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 C4orf36Q96KX1 117 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 MKRN2Q9H000 416 aaKnown RBP9.08□□□□□ -0.96
SNX13-203ENST00000428135 STUB1Q9UNE7 303 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 TMEM184BQ9Y519 407 aaPredicted RBP9.08□□□□□ -0.96
SNX13-203ENST00000428135 CXCL10P02778 98 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 AMY2AP04746 511 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 TACR3P29371 465 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 CRABP1P29762 137 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 TUBA1BP68363 451 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 TUBA4AP68366 448 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 SEMA3BQ13214 749 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 VWA2Q5GFL6 755 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 OPN5Q6U736 354 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 MED25Q71SY5 747 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 TUBA1AQ71U36 451 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 RTL10Q7L3V2 364 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 ZNF300Q96RE9 604 aaPredicted RBP9.08□□□□□ -0.96
SNX13-203ENST00000428135 SLC35A3Q9Y2D2 325 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 HSPB11Q9Y547 144 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 H0YAE9 185 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 TMX2-CTNND1H3BSU7 103 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 SERPINA5P05154 406 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 FGF4P08620 206 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 HTR5AP47898 357 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 ART1P52961 327 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 RAB38P57729 211 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 PHC1P78364 1004 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 SPATS1Q496A3 300 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 OR4F15Q8NGB8 312 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 ACOT12Q8WYK0 555 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 KHSRPQ92945 711 aaKnown RBP eCLIP9.08□□□□□ -0.961e-6■■■■□ 21.4
SNX13-203ENST00000428135 ZNF578Q96N58 590 aaPredicted RBP9.08□□□□□ -0.96
SNX13-203ENST00000428135 HSFX1Q9UBD0 423 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 HIF3AQ9Y2N7 669 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 PCDHGB6Q9Y5F9 930 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 GPR45Q9Y5Y3 372 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 SLC19A2O60779 497 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 DDAH2O95865 285 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 DLSTP36957 453 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 BMXP51813 675 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 COX20Q5RI15 118 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 LCN8Q6JVE9 175 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 MEX3BQ6ZN04 569 aaKnown RBP9.07□□□□□ -0.96
SNX13-203ENST00000428135 MUCL1Q96DR8 90 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 KLHL15Q96M94 604 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 SEMA6CQ9H3T2 930 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 B3GNT2Q9NY97 397 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 NOSIPQ9Y314 301 aaKnown RBP9.07□□□□□ -0.96
SNX13-203ENST00000428135 COL4A1P02462 1669 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 INMT-MINDY4F8WBC2 141 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 NUDT1P36639 197 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 PPA1Q15181 289 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 C14orf28Q4W4Y0 310 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 HAGHLQ6PII5 290 aaPredicted RBP9.07□□□□□ -0.96
SNX13-203ENST00000428135 INTS14Q96SY0 518 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 OR52D1Q9H346 318 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 OR2W5A6NFC9 320 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 TTLL8A6PVC2 850 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 ZNF81P51508 661 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 AIMP2Q13155 320 aaKnown RBP9.07□□□□□ -0.96
SNX13-203ENST00000428135 OR5H2Q8NGV7 314 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 MRGPRX1Q96LB2 322 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 HCAR1Q9BXC0 346 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 SYT4Q9H2B2 425 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 ATG4BQ9Y4P1 393 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 SRPX2O60687 465 aaPredicted RBP9.07□□□□□ -0.96
SNX13-203ENST00000428135 TPPPO94811 219 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 GCAP28676 217 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 LCN1P31025 176 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 SRSF5Q13243 272 aaKnown RBP9.07□□□□□ -0.96
SNX13-203ENST00000428135 SLC6A19Q695T7 634 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 SLC29A1Q99808 456 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 FUNDC2Q9BWH2 189 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 FSCN3Q9NQT6 498 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 SACM1LQ9NTJ5 587 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 MGAT4CQ9UBM8 478 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 SPEF1Q9Y4P9 236 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 TRBV4-1A0A0J9YWV2 114 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 FBP2O00757 339 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 ZNF264O43296 627 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 NCR1O76036 304 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 UTS2O95399 124 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 HSD17B1P14061 328 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 GNMTQ14749 295 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 SLC16A14Q7RTX9 510 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 LINC00346Q8IVM7 164 aa9.07□□□□□ -0.96
SNX13-203ENST00000428135 ETFBKMTQ8IXQ9 262 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms