RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 SIGLEC7Q9Y286 467 aa13.13□□□□□ -0.31
TPM3P9-201ENST00000424846 AK6Q9Y3D8 172 aaKnown RBP13.13□□□□□ -0.31
TPM3P9-201ENST00000424846 ALPK2Q86TB3 2170 aa13.13□□□□□ -0.31
TPM3P9-201ENST00000424846 TRAPPC13A5PLN9 417 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 G3V3Q6 166 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 LDB3O75112 727 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 TFP02787 698 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 BMP7P18075 431 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 F8A1P23610 371 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 MAT2AP31153 395 aaKnown RBP13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 CTNNB1P35222 781 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 ZNF425Q6IV72 752 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 PYHIN1Q6K0P9 492 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 ADGRD2Q7Z7M1 963 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 LRRC25Q8N386 305 aaPredicted RBP13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 OR52L1Q8NGH7 329 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 BPIFA2Q96DR5 249 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 ZMYND19Q96E35 227 aaPredicted RBP13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 MS4A4EQ96PG1 132 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 SLC6A17Q9H1V8 727 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 IL21RQ9HBE5 538 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 CMC2Q9NRP2 79 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 C1QTNF3-AMACRE9PGA6 284 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 GMDSO60547 372 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 FGF19O95750 216 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 RAF1P04049 648 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 NGFRP08138 427 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 PTHLHP12272 177 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 RAB3BP20337 219 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 CRYZQ08257 329 aaKnown RBP13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 RPE65Q16518 533 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 GSG1Q2KHT4 349 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 DEFB115Q30KQ5 88 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 DMKNQ6E0U4 476 aaPredicted RBP13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 RAB42Q8N4Z0 105 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 TMEM52Q8NDY8 209 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 SPPL3Q8TCT6 385 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 PIGKQ92643 395 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 DERL3Q96Q80 235 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 FN3KQ9H479 309 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 KCMF1Q9P0J7 381 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 ST6GALNAC2Q9UJ37 374 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 ING4Q9UNL4 249 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 MRPS2Q9Y399 296 aaKnown RBP13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 ZNF593O00488 134 aaPredicted RBP13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 GPR171O14626 319 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 GNB5O14775 395 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 ANXA3P12429 323 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 SLC2A5P22732 501 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 SELENOPP49908 381 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 CAMK2DQ13557 499 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 EXOSC7Q15024 291 aaKnown RBP13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 ARHGAP11BQ3KRB8 267 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 WDR45BQ5MNZ6 344 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 MTSS1LQ765P7 747 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 GLRX5Q86SX6 157 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 MFSD9Q8NBP5 474 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 HAVCR2Q8TDQ0 301 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 HMGB4Q8WW32 186 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 NR4A3Q92570 626 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 WDR89Q96FK6 387 aaPredicted RBP13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 PTCHD1Q96NR3 888 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 TNFRSF13CQ96RJ3 184 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 BRD7Q9NPI1 651 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 GLTPQ9NZD2 209 aa13.12□□□□□ -0.31
TPM3P9-201ENST00000424846 GXYLT2A0PJZ3 443 aa13.11□□□□□ -0.31
TPM3P9-201ENST00000424846 LRRN3E7EW58 273 aa13.11□□□□□ -0.31
TPM3P9-201ENST00000424846 NAA10P41227 235 aaPredicted RBP13.11□□□□□ -0.31
TPM3P9-201ENST00000424846 ARFIP1P53367 373 aa13.11□□□□□ -0.31
TPM3P9-201ENST00000424846 SHC2P98077 582 aa13.11□□□□□ -0.31
TPM3P9-201ENST00000424846 SFRP4Q6FHJ7 346 aaPredicted RBP13.11□□□□□ -0.31
TPM3P9-201ENST00000424846 ASPGQ86U10 573 aa13.11□□□□□ -0.31
TPM3P9-201ENST00000424846 OR2L13Q8N349 312 aa13.11□□□□□ -0.31
TPM3P9-201ENST00000424846 SLC44A3Q8N4M1 653 aa13.11□□□□□ -0.31
TPM3P9-201ENST00000424846 PDCD1LG2Q9BQ51 273 aa13.11□□□□□ -0.31
TPM3P9-201ENST00000424846 LRRN3Q9H3W5 708 aa13.11□□□□□ -0.31
TPM3P9-201ENST00000424846 EMC7Q9NPA0 242 aa13.11□□□□□ -0.31
TPM3P9-201ENST00000424846 EIF3KQ9UBQ5 218 aaKnown RBP13.11□□□□□ -0.31
TPM3P9-201ENST00000424846 IDSB3KWA1 339 aa13.11□□□□□ -0.31
TPM3P9-201ENST00000424846 ZNF81P51508 661 aa13.11□□□□□ -0.31
TPM3P9-201ENST00000424846 DUSP8Q13202 625 aa13.11□□□□□ -0.31
TPM3P9-201ENST00000424846 SRSF5Q13243 272 aaKnown RBP13.11□□□□□ -0.31
TPM3P9-201ENST00000424846 GXYLT1Q4G148 440 aa13.11□□□□□ -0.31
TPM3P9-201ENST00000424846 GARNL3Q5VVW2 1013 aa13.11□□□□□ -0.31
TPM3P9-201ENST00000424846 ZNF782Q6ZMW2 699 aaPredicted RBP13.11□□□□□ -0.31
TPM3P9-201ENST00000424846 HDDC3Q8N4P3 179 aa13.11□□□□□ -0.31
TPM3P9-201ENST00000424846 ZNF527Q8NB42 609 aa13.11□□□□□ -0.31
TPM3P9-201ENST00000424846 CEP76Q8TAP6 659 aa13.11□□□□□ -0.31
TPM3P9-201ENST00000424846 KCTD12Q96CX2 325 aaKnown RBP13.11□□□□□ -0.31
TPM3P9-201ENST00000424846 OR14A2Q96R54 314 aa13.11□□□□□ -0.31
TPM3P9-201ENST00000424846 PHF11Q9UIL8 331 aa13.11□□□□□ -0.31
TPM3P9-201ENST00000424846 RPS10-NUDT3A0A1W2PQS6 291 aa13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 PSMD9O00233 223 aa13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 CTSVO60911 334 aa13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 FKTNO75072 461 aa13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 HRGP04196 525 aa13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 TPOP07202 933 aa13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 EPXP11678 715 aa13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 AK4P27144 223 aaPredicted RBP13.1□□□□□ -0.31
TPM3P9-201ENST00000424846 PSMB10P40306 273 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms