RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 LRRC70Q7Z2Q7 622 aa2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 OR2AP1Q8NGE2 309 aa2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 OR52M1Q8NGK5 317 aa2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 CCDC110Q8TBZ0 833 aa2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 PAQR8Q8TEZ7 354 aa2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 ANKRD49Q8WVL7 239 aa2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 RPUSD4Q96CM3 377 aaKnown RBP2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 TCEANC2Q96MN5 208 aa2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 SRXN1Q9BYN0 137 aa2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 SLC25A39Q9BZJ4 359 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 ECT2Q9H8V3 914 aa2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 CALHM2Q9HA72 323 aa2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 PALMDQ9NP74 551 aa2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 MRPL39Q9NYK5 338 aaKnown RBP2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 ATXN10Q9UBB4 475 aa2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 IFT52Q9Y366 437 aa2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 PLEKHG1Q9ULL1 1385 aa2.73□□□□□ -1.97
HMGB1P49-201ENST00000418882 A0A1B0GWB2 263 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 GPR89AB7ZAQ6 455 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 H0YCG3 227 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 BOLA2-SMG1P6H3BVE0 249 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 UBXN8O00124 270 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 CXCL11O14625 94 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 ANGPT2O15123 496 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 OPN1LWP04000 364 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 OPN1MWP04001 364 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 GPR89BP0CG08 455 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 OPN1MW2P0DN77 364 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 OPN1MW3P0DN78 364 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 GCFC2P16383 781 aaKnown RBP2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 SERPINA2P20848 420 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 HTR1EP28566 365 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 NTSP30990 170 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 UGT1A5P35504 534 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 PRPHP41219 470 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 RPS10P46783 165 aaKnown RBP2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 SULT1E1P49888 294 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 GBX2P52951 348 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 OSTNP61366 133 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 CUL1Q13616 776 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 ATXN7L3Q14CW9 347 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 NDUFA9Q16795 377 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 CFAP221Q4G0U5 840 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 BOLA3Q53S33 107 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 CCDC183Q5T5S1 534 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 RIPPLY2Q5TAB7 128 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 AGBL2Q5U5Z8 902 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 RAET1GQ6H3X3 334 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 CENPPQ6IPU0 288 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 CES3Q6UWW8 571 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 IL1F10Q8WWZ1 152 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 HPDLQ96IR7 371 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 OR5B2Q96R09 309 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 ARHGDIGQ99819 225 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 THUMPD2Q9BTF0 503 aaKnown RBP2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 RAB33BQ9H082 229 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 RWDD1Q9H446 243 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 ZDHHC11Q9H8X9 412 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 MMP26Q9NRE1 261 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 CHRNA9Q9UGM1 479 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 KLK12Q9UKR0 248 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 CDH10Q9Y6N8 788 aa2.72□□□□□ -1.97
HMGB1P49-201ENST00000418882 A0A0G2JRQ6 117 aa2.71□□□□□ -1.98
HMGB1P49-201ENST00000418882 A0A1B0GWJ7 208 aa2.71□□□□□ -1.98
HMGB1P49-201ENST00000418882 HCN1O60741 890 aa2.71□□□□□ -1.98
HMGB1P49-201ENST00000418882 VPS26AO75436 327 aa2.71□□□□□ -1.98
HMGB1P49-201ENST00000418882 THRBP10828 461 aa2.71□□□□□ -1.98
HMGB1P49-201ENST00000418882 TOP1P11387 765 aaKnown RBP2.71□□□□□ -1.98
HMGB1P49-201ENST00000418882 GZMAP12544 262 aa2.71□□□□□ -1.98
HMGB1P49-201ENST00000418882 ARF4P18085 180 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P49-201ENST00000418882 CCND2P30279 289 aa2.71□□□□□ -1.98
HMGB1P49-201ENST00000418882 SOX6P35712 828 aa2.71□□□□□ -1.98
HMGB1P49-201ENST00000418882 PEX19P40855 299 aa2.71□□□□□ -1.98
HMGB1P49-201ENST00000418882 CCNA1P78396 465 aa2.71□□□□□ -1.98
HMGB1P49-201ENST00000418882 HSF2Q03933 536 aa2.71□□□□□ -1.98
HMGB1P49-201ENST00000418882 GPM6BQ13491 265 aa2.71□□□□□ -1.98
HMGB1P49-201ENST00000418882 EBI3Q14213 229 aa2.71□□□□□ -1.98
HMGB1P49-201ENST00000418882 MPPED2Q15777 294 aa2.71□□□□□ -1.98
HMGB1P49-201ENST00000418882 MAPK6Q16659 721 aa2.71□□□□□ -1.98
HMGB1P49-201ENST00000418882 SLC5A12Q1EHB4 618 aa2.71□□□□□ -1.98
HMGB1P49-201ENST00000418882 ZYG11AQ6WRX3 759 aa2.71□□□□□ -1.98
HMGB1P49-201ENST00000418882 DNM1P46Q6ZS02 220 aa2.71□□□□□ -1.98
HMGB1P49-201ENST00000418882 GRAMD2AQ8IUY3 354 aa2.71□□□□□ -1.98
HMGB1P49-201ENST00000418882 ZNF740Q8NDX6 193 aa2.71□□□□□ -1.98
HMGB1P49-201ENST00000418882 NEIL3Q8TAT5 605 aa2.71□□□□□ -1.98
HMGB1P49-201ENST00000418882 GIPC3Q8TF64 312 aa2.71□□□□□ -1.98
HMGB1P49-201ENST00000418882 OR1E3Q8WZA6 343 aa2.71□□□□□ -1.98
HMGB1P49-201ENST00000418882 MS4A14Q96JA4 679 aa2.71□□□□□ -1.98
HMGB1P49-201ENST00000418882 MBOAT4Q96T53 435 aa2.71□□□□□ -1.98
HMGB1P49-201ENST00000418882 SLC30A2Q9BRI3 323 aa2.71□□□□□ -1.98
HMGB1P49-201ENST00000418882 GORASP2Q9H8Y8 452 aa2.71□□□□□ -1.98
HMGB1P49-201ENST00000418882 SMPD3Q9NY59 655 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P49-201ENST00000418882 SMC3Q9UQE7 1217 aa2.71□□□□□ -1.98
HMGB1P49-201ENST00000418882 CHADO15335 359 aa2.7□□□□□ -1.98
HMGB1P49-201ENST00000418882 OR4F21O95013 312 aa2.7□□□□□ -1.98
HMGB1P49-201ENST00000418882 MBD3O95983 291 aa2.7□□□□□ -1.98
HMGB1P49-201ENST00000418882 RCC1P18754 421 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P49-201ENST00000418882 PAX7P23759 505 aa2.7□□□□□ -1.98
HMGB1P49-201ENST00000418882 DPP4P27487 766 aa2.7□□□□□ -1.98
HMGB1P49-201ENST00000418882 EPHX2P34913 555 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms