RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 DUXAA6NLW8 204 aa16.12■□□□□ 0.17
VCP-202ENST00000417448 SHISA8B8ZZ34 492 aa16.12■□□□□ 0.17
VCP-202ENST00000417448 CCKARP32238 428 aa16.12■□□□□ 0.17
VCP-202ENST00000417448 CLK3P49761 638 aaKnown RBP16.12■□□□□ 0.17
VCP-202ENST00000417448 CHRNEQ04844 493 aa16.12■□□□□ 0.17
VCP-202ENST00000417448 SELPLGQ14242 412 aa16.12■□□□□ 0.17
VCP-202ENST00000417448 MAPK11Q15759 364 aa16.12■□□□□ 0.17
VCP-202ENST00000417448 MAPK14Q16539 360 aa16.12■□□□□ 0.17
VCP-202ENST00000417448 PDZK1Q5T2W1 519 aa16.12■□□□□ 0.17
VCP-202ENST00000417448 ATAD3BQ5T9A4 648 aa16.12■□□□□ 0.17
VCP-202ENST00000417448 ADGRE4PQ86SQ3 457 aa16.12■□□□□ 0.17
VCP-202ENST00000417448 MTDHQ86UE4 582 aaKnown RBP16.12■□□□□ 0.17
VCP-202ENST00000417448 SNX32Q86XE0 403 aa16.12■□□□□ 0.17
VCP-202ENST00000417448 MEIOBQ8N635 442 aa16.12■□□□□ 0.17
VCP-202ENST00000417448 FAM83FQ8NEG4 500 aaPredicted RBP16.12■□□□□ 0.17
VCP-202ENST00000417448 OR2M3Q8NG83 312 aa16.12■□□□□ 0.17
VCP-202ENST00000417448 UBQLN4Q9NRR5 601 aa16.12■□□□□ 0.17
VCP-202ENST00000417448 EXD2Q9NVH0 621 aa16.12■□□□□ 0.17
VCP-202ENST00000417448 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.12■□□□□ 0.17
VCP-202ENST00000417448 LEF1Q9UJU2 399 aaPredicted RBP16.12■□□□□ 0.17
VCP-202ENST00000417448 ABCG2Q9UNQ0 655 aa16.12■□□□□ 0.17
VCP-202ENST00000417448 NDUFAF1Q9Y375 327 aa16.12■□□□□ 0.17
VCP-202ENST00000417448 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.11■□□□□ 0.172e-6■■■■■ 39.2
VCP-202ENST00000417448 TRBV5-3A0A0A0MS03 114 aa16.11■□□□□ 0.17
VCP-202ENST00000417448 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.11■□□□□ 0.17
VCP-202ENST00000417448 RNF223E7ERA6 249 aa16.11■□□□□ 0.17
VCP-202ENST00000417448 SCDO00767 359 aa16.11■□□□□ 0.17
VCP-202ENST00000417448 ANGPT2O15123 496 aa16.11■□□□□ 0.17
VCP-202ENST00000417448 NDUFB5O43674 189 aa16.11■□□□□ 0.17
VCP-202ENST00000417448 TNFRSF21O75509 655 aa16.11■□□□□ 0.17
VCP-202ENST00000417448 STX11O75558 287 aa16.11■□□□□ 0.17
VCP-202ENST00000417448 CBR3O75828 277 aa16.11■□□□□ 0.17
VCP-202ENST00000417448 TNFSF13O75888 250 aa16.11■□□□□ 0.17
VCP-202ENST00000417448 H6PDO95479 791 aa16.11■□□□□ 0.17
VCP-202ENST00000417448 CHRM4P08173 479 aa16.11■□□□□ 0.17
VCP-202ENST00000417448 HPGDP15428 266 aa16.11■□□□□ 0.17
VCP-202ENST00000417448 ATP12AP54707 1039 aa16.11■□□□□ 0.17
VCP-202ENST00000417448 RPS26P11Q5JNZ5 115 aaPredicted RBP16.11■□□□□ 0.17
VCP-202ENST00000417448 LRIF1Q5T3J3 769 aa16.11■□□□□ 0.17
VCP-202ENST00000417448 TYW3Q6IPR3 259 aaKnown RBP16.11■□□□□ 0.17
VCP-202ENST00000417448 FRRS1Q6ZNA5 592 aa16.11■□□□□ 0.17
VCP-202ENST00000417448 DHDDSQ86SQ9 333 aa16.11■□□□□ 0.17
VCP-202ENST00000417448 PHOSPHO1Q8TCT1 267 aa16.11■□□□□ 0.17
VCP-202ENST00000417448 MAL2Q969L2 176 aa16.11■□□□□ 0.17
VCP-202ENST00000417448 ZFP3Q96NJ6 502 aa16.11■□□□□ 0.17
VCP-202ENST00000417448 NPAS1Q99742 590 aa16.11■□□□□ 0.17
VCP-202ENST00000417448 PIGMQ9H3S5 423 aa16.11■□□□□ 0.17
VCP-202ENST00000417448 ZNF701Q9NV72 531 aaPredicted RBP16.11■□□□□ 0.17
VCP-202ENST00000417448 ZNF226Q9NYT6 803 aa16.11■□□□□ 0.17
VCP-202ENST00000417448 PACSIN3Q9UKS6 424 aa16.11■□□□□ 0.17
VCP-202ENST00000417448 CLDN24A6NM45 220 aa16.1■□□□□ 0.17
VCP-202ENST00000417448 ALG1L2C9J202 215 aa16.1■□□□□ 0.17
VCP-202ENST00000417448 NPIPB9F8W1W9 429 aa16.1■□□□□ 0.17
VCP-202ENST00000417448 ZIC3O60481 467 aa16.1■□□□□ 0.17
VCP-202ENST00000417448 SNX3O60493 162 aa16.1■□□□□ 0.17
VCP-202ENST00000417448 BCAS1O75363 584 aaPredicted RBP16.1■□□□□ 0.17
VCP-202ENST00000417448 NR2F1P10589 423 aa16.1■□□□□ 0.17
VCP-202ENST00000417448 DPP4P27487 766 aa16.1■□□□□ 0.17
VCP-202ENST00000417448 STARP49675 285 aa16.1■□□□□ 0.17
VCP-202ENST00000417448 DSTNP60981 165 aa16.1■□□□□ 0.17
VCP-202ENST00000417448 IRX1P78414 480 aaPredicted RBP16.1■□□□□ 0.17
VCP-202ENST00000417448 NFYCQ13952 458 aa16.1■□□□□ 0.17
VCP-202ENST00000417448 RGNQ15493 299 aa16.1■□□□□ 0.17
VCP-202ENST00000417448 KLHL26Q53HC5 615 aa16.1■□□□□ 0.17
VCP-202ENST00000417448 C22orf34Q6ZV56 151 aa16.1■□□□□ 0.17
VCP-202ENST00000417448 TREML1Q86YW5 311 aa16.1■□□□□ 0.17
VCP-202ENST00000417448 FADS6Q8N9I5 356 aa16.1■□□□□ 0.17
VCP-202ENST00000417448 OR14L1PQ8NHC6 308 aa16.1■□□□□ 0.17
VCP-202ENST00000417448 TM9SF2Q99805 663 aa16.1■□□□□ 0.17
VCP-202ENST00000417448 SLC39A3Q9BRY0 314 aa16.1■□□□□ 0.17
VCP-202ENST00000417448 ZNF350Q9GZX5 532 aa16.1■□□□□ 0.17
VCP-202ENST00000417448 SDHAF3Q9NRP4 125 aa16.1■□□□□ 0.17
VCP-202ENST00000417448 TMEM45AQ9NWC5 275 aa16.1■□□□□ 0.17
VCP-202ENST00000417448 CLCF1Q9UBD9 225 aa16.1■□□□□ 0.17
VCP-202ENST00000417448 DKKL1Q9UK85 242 aa16.1■□□□□ 0.17
VCP-202ENST00000417448 CARD8Q9Y2G2 431 aa16.1■□□□□ 0.17
VCP-202ENST00000417448 WDR45Q9Y484 360 aa16.1■□□□□ 0.17
VCP-202ENST00000417448 CAPN7Q9Y6W3 813 aa16.1■□□□□ 0.17
VCP-202ENST00000417448 WIPF1O43516 503 aa16.09■□□□□ 0.17
VCP-202ENST00000417448 UGT2B17O75795 530 aa16.09■□□□□ 0.17
VCP-202ENST00000417448 BCHEP06276 602 aa16.09■□□□□ 0.17
VCP-202ENST00000417448 HK1P19367 917 aa16.09■□□□□ 0.17
VCP-202ENST00000417448 MTPNP58546 118 aa16.09■□□□□ 0.17
VCP-202ENST00000417448 ZNF117Q03924 483 aa16.09■□□□□ 0.17
VCP-202ENST00000417448 C17orf67Q0P5P2 114 aa16.09■□□□□ 0.17
VCP-202ENST00000417448 KRTAP24-1Q3LI83 254 aa16.09■□□□□ 0.17
VCP-202ENST00000417448 RUNDC3AQ59EK9 446 aa16.09■□□□□ 0.17
VCP-202ENST00000417448 CBLN3Q6UW01 205 aa16.09■□□□□ 0.17
VCP-202ENST00000417448 PLEKHM3Q6ZWE6 761 aa16.09■□□□□ 0.17
VCP-202ENST00000417448 ZNF550Q7Z398 422 aa16.09■□□□□ 0.17
VCP-202ENST00000417448 ZNF524Q96C55 264 aa16.09■□□□□ 0.17
VCP-202ENST00000417448 CPPED1Q9BRF8 314 aaPredicted RBP16.09■□□□□ 0.17
VCP-202ENST00000417448 MED18Q9BUE0 208 aa16.09■□□□□ 0.17
VCP-202ENST00000417448 NSRP1Q9H0G5 558 aaKnown RBP16.09■□□□□ 0.17
VCP-202ENST00000417448 SLC38A1Q9H2H9 487 aa16.09■□□□□ 0.17
VCP-202ENST00000417448 TAS2R10Q9NYW0 307 aa16.09■□□□□ 0.17
VCP-202ENST00000417448 DTNAQ9Y4J8 743 aa16.09■□□□□ 0.17
VCP-202ENST00000417448 GTPBP1O00178 669 aaKnown RBP16.08■□□□□ 0.16
VCP-202ENST00000417448 CYP7B1O75881 506 aa16.08■□□□□ 0.16
VCP-202ENST00000417448 AGR2O95994 175 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms