RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 SPATA19Q7Z5L4 167 aa17.19■□□□□ 0.34
SMARCB1-204ENST00000407422 TUSC5Q8IXB3 177 aa17.19■□□□□ 0.34
SMARCB1-204ENST00000407422 BTNL2Q9UIR0 455 aa17.19■□□□□ 0.34
SMARCB1-204ENST00000407422 H6PDO95479 791 aa17.18■□□□□ 0.34
SMARCB1-204ENST00000407422 PGRP06401 933 aa17.18■□□□□ 0.34
SMARCB1-204ENST00000407422 PABPC4LP0CB38 370 aaKnown RBP17.18■□□□□ 0.34
SMARCB1-204ENST00000407422 PGM1P36871 562 aa17.18■□□□□ 0.34
SMARCB1-204ENST00000407422 CDKN2CP42773 168 aa17.18■□□□□ 0.34
SMARCB1-204ENST00000407422 KHKP50053 298 aa17.18■□□□□ 0.34
SMARCB1-204ENST00000407422 SESN3P58005 492 aa17.18■□□□□ 0.34
SMARCB1-204ENST00000407422 EIF3MQ7L2H7 374 aaKnown RBP17.18■□□□□ 0.34
SMARCB1-204ENST00000407422 RNF130Q86XS8 419 aa17.18■□□□□ 0.34
SMARCB1-204ENST00000407422 WFDC11Q8NEX6 87 aa17.18■□□□□ 0.34
SMARCB1-204ENST00000407422 SAP130Q9H0E3 1048 aa17.18■□□□□ 0.34
SMARCB1-204ENST00000407422 KLHL13Q9P2N7 655 aa17.18■□□□□ 0.34
SMARCB1-204ENST00000407422 RAI1Q7Z5J4 1906 aaPredicted RBP17.18■□□□□ 0.34
SMARCB1-204ENST00000407422 CCDC154A6NI56 674 aa17.18■□□□□ 0.34
SMARCB1-204ENST00000407422 CLDN24A6NM45 220 aa17.18■□□□□ 0.34
SMARCB1-204ENST00000407422 HMGN4O00479 90 aa17.18■□□□□ 0.34
SMARCB1-204ENST00000407422 DIAPH2O60879 1101 aa17.18■□□□□ 0.34
SMARCB1-204ENST00000407422 SLC7A1P30825 629 aa17.18■□□□□ 0.34
SMARCB1-204ENST00000407422 SLC18A1P54219 525 aa17.18■□□□□ 0.34
SMARCB1-204ENST00000407422 CHRNEQ04844 493 aa17.18■□□□□ 0.34
SMARCB1-204ENST00000407422 RNPS1Q15287 305 aaKnown RBP17.18■□□□□ 0.34
SMARCB1-204ENST00000407422 TMEM201Q5SNT2 666 aa17.18■□□□□ 0.34
SMARCB1-204ENST00000407422 BEND6Q5SZJ8 279 aaPredicted RBP17.18■□□□□ 0.34
SMARCB1-204ENST00000407422 BEND4Q6ZU67 534 aa17.18■□□□□ 0.34
SMARCB1-204ENST00000407422 STK32CQ86UX6 486 aa17.18■□□□□ 0.34
SMARCB1-204ENST00000407422 CXorf67Q86X51 503 aaPredicted RBP17.18■□□□□ 0.34
SMARCB1-204ENST00000407422 FAM71CQ8NEG0 241 aa17.18■□□□□ 0.34
SMARCB1-204ENST00000407422 TLCD1Q96CP7 247 aa17.18■□□□□ 0.34
SMARCB1-204ENST00000407422 OR52E6Q96RD3 313 aa17.18■□□□□ 0.34
SMARCB1-204ENST00000407422 PANX1Q96RD7 426 aa17.18■□□□□ 0.34
SMARCB1-204ENST00000407422 TMBIM4Q9HC24 238 aa17.18■□□□□ 0.34
SMARCB1-204ENST00000407422 TRPC5OSA6NMA1 111 aa17.17■□□□□ 0.34
SMARCB1-204ENST00000407422 PRKD3O94806 890 aa17.17■□□□□ 0.34
SMARCB1-204ENST00000407422 GSNP06396 782 aa17.17■□□□□ 0.34
SMARCB1-204ENST00000407422 GUSBP08236 651 aa17.17■□□□□ 0.34
SMARCB1-204ENST00000407422 RAC3P60763 192 aa17.17■□□□□ 0.34
SMARCB1-204ENST00000407422 PLAURQ03405 335 aa17.17■□□□□ 0.34
SMARCB1-204ENST00000407422 MERTKQ12866 999 aa17.17■□□□□ 0.34
SMARCB1-204ENST00000407422 GPAT3Q53EU6 434 aa17.17■□□□□ 0.34
SMARCB1-204ENST00000407422 AP1ARQ63HQ0 302 aa17.17■□□□□ 0.34
SMARCB1-204ENST00000407422 ATG16L1Q676U5 607 aa17.17■□□□□ 0.34
SMARCB1-204ENST00000407422 NXNQ6DKJ4 435 aa17.17■□□□□ 0.34
SMARCB1-204ENST00000407422 MAVSQ7Z434 540 aa17.17■□□□□ 0.34
SMARCB1-204ENST00000407422 LSRQ86X29 649 aaPredicted RBP17.17■□□□□ 0.34
SMARCB1-204ENST00000407422 ZNF619Q8N2I2 560 aa17.17■□□□□ 0.34
SMARCB1-204ENST00000407422 ST8SIA1Q92185 356 aa17.17■□□□□ 0.34
SMARCB1-204ENST00000407422 OR5B2Q96R09 309 aa17.17■□□□□ 0.34
SMARCB1-204ENST00000407422 ACTR6Q9GZN1 396 aa17.17■□□□□ 0.34
SMARCB1-204ENST00000407422 MANSC1Q9H8J5 431 aa17.17■□□□□ 0.34
SMARCB1-204ENST00000407422 UBTD1Q9HAC8 227 aa17.17■□□□□ 0.34
SMARCB1-204ENST00000407422 POLE3Q9NRF9 147 aa17.17■□□□□ 0.34
SMARCB1-204ENST00000407422 ING1Q9UK53 422 aaPredicted RBP17.17■□□□□ 0.34
SMARCB1-204ENST00000407422 KLF4O43474 513 aa17.16■□□□□ 0.34
SMARCB1-204ENST00000407422 PGCP20142 388 aa17.16■□□□□ 0.34
SMARCB1-204ENST00000407422 HOXC12P31275 282 aa17.16■□□□□ 0.34
SMARCB1-204ENST00000407422 TSC22D1Q15714 1073 aa17.16■□□□□ 0.34
SMARCB1-204ENST00000407422 SYPL1Q16563 259 aa17.16■□□□□ 0.34
SMARCB1-204ENST00000407422 SLC9B1Q4ZJI4 515 aa17.16■□□□□ 0.34
SMARCB1-204ENST00000407422 C3orf33Q6P1S2 294 aa17.16■□□□□ 0.34
SMARCB1-204ENST00000407422 TFAP2EQ6VUC0 442 aa17.16■□□□□ 0.34
SMARCB1-204ENST00000407422 ZNF621Q6ZSS3 439 aa17.16■□□□□ 0.34
SMARCB1-204ENST00000407422 PLEKHM3Q6ZWE6 761 aa17.16■□□□□ 0.34
SMARCB1-204ENST00000407422 KRTAP1-3Q8IUG1 177 aa17.16■□□□□ 0.34
SMARCB1-204ENST00000407422 ANKFN1Q8N957 763 aa17.16■□□□□ 0.34
SMARCB1-204ENST00000407422 PNPT1Q8TCS8 783 aaKnown RBP17.16■□□□□ 0.34
SMARCB1-204ENST00000407422 DLL4Q9NR61 685 aa17.16■□□□□ 0.34
SMARCB1-204ENST00000407422 ACER3Q9NUN7 267 aa17.16■□□□□ 0.34
SMARCB1-204ENST00000407422 BEX4Q9NWD9 120 aaPredicted RBP17.16■□□□□ 0.34
SMARCB1-204ENST00000407422 NKIRAS1Q9NYS0 192 aa17.16■□□□□ 0.34
SMARCB1-204ENST00000407422 SLC35A3Q9Y2D2 325 aa17.16■□□□□ 0.34
SMARCB1-204ENST00000407422 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.15■□□□□ 0.34
SMARCB1-204ENST00000407422 ADAM11O75078 769 aa17.15■□□□□ 0.34
SMARCB1-204ENST00000407422 YES1P07947 543 aa17.15■□□□□ 0.34
SMARCB1-204ENST00000407422 PPP3CBP16298 524 aa17.15■□□□□ 0.34
SMARCB1-204ENST00000407422 RYKP34925 604 aa17.15■□□□□ 0.34
SMARCB1-204ENST00000407422 COX20Q5RI15 118 aa17.15■□□□□ 0.34
SMARCB1-204ENST00000407422 GABRG1Q8N1C3 465 aa17.15■□□□□ 0.34
SMARCB1-204ENST00000407422 TMEM234Q8WY98 164 aa17.15■□□□□ 0.34
SMARCB1-204ENST00000407422 MAELQ96JY0 434 aaKnown RBP17.15■□□□□ 0.34
SMARCB1-204ENST00000407422 SLC6A13Q9NSD5 602 aa17.15■□□□□ 0.34
SMARCB1-204ENST00000407422 SMAD9O15198 467 aaKnown RBP17.14■□□□□ 0.33
SMARCB1-204ENST00000407422 ERLIN1O75477 346 aa17.14■□□□□ 0.33
SMARCB1-204ENST00000407422 GCM2O75603 506 aaPredicted RBP17.14■□□□□ 0.33
SMARCB1-204ENST00000407422 CHRM4P08173 479 aa17.14■□□□□ 0.33
SMARCB1-204ENST00000407422 PSMB1P20618 241 aaKnown RBP17.14■□□□□ 0.33
SMARCB1-204ENST00000407422 KCNJ10P78508 379 aa17.14■□□□□ 0.33
SMARCB1-204ENST00000407422 HPCAP84074 193 aa17.14■□□□□ 0.33
SMARCB1-204ENST00000407422 ACKR1Q16570 336 aa17.14■□□□□ 0.33
SMARCB1-204ENST00000407422 WFDC8Q8IUA0 241 aa17.14■□□□□ 0.33
SMARCB1-204ENST00000407422 SLC43A2Q8N370 569 aa17.14■□□□□ 0.33
SMARCB1-204ENST00000407422 TRIML2Q8N7C3 387 aa17.14■□□□□ 0.33
SMARCB1-204ENST00000407422 RAB3IL1Q8TBN0 382 aa17.14■□□□□ 0.33
SMARCB1-204ENST00000407422 ZNF775Q96BV0 537 aaPredicted RBP17.14■□□□□ 0.33
SMARCB1-204ENST00000407422 ZBTB18Q99592 522 aa17.14■□□□□ 0.33
SMARCB1-204ENST00000407422 PSD2Q9BQI7 771 aa17.14■□□□□ 0.33
SMARCB1-204ENST00000407422 SLC38A1Q9H2H9 487 aa17.14■□□□□ 0.33
SMARCB1-204ENST00000407422 GP6Q9HCN6 339 aa17.14■□□□□ 0.33
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