RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 TCN1P20061 433 aaPredicted RBP9.56□□□□□ -0.88
RPAIN-204ENST00000405578 KDELR2P33947 212 aa9.56□□□□□ -0.88
RPAIN-204ENST00000405578 CPOXP36551 454 aa9.56□□□□□ -0.88
RPAIN-204ENST00000405578 PGM1P36871 562 aa9.56□□□□□ -0.88
RPAIN-204ENST00000405578 SMSP52788 366 aa9.56□□□□□ -0.88
RPAIN-204ENST00000405578 EEF1A1P68104 462 aaKnown RBP9.56□□□□□ -0.88
RPAIN-204ENST00000405578 BNIP2Q12982 314 aa9.56□□□□□ -0.88
RPAIN-204ENST00000405578 SKP2Q13309 424 aa9.56□□□□□ -0.88
RPAIN-204ENST00000405578 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.56□□□□□ -0.88
RPAIN-204ENST00000405578 CMPK2Q5EBM0 449 aa9.56□□□□□ -0.88
RPAIN-204ENST00000405578 RNFT1Q5M7Z0 435 aa9.56□□□□□ -0.88
RPAIN-204ENST00000405578 RAET1LQ5VY80 246 aa9.56□□□□□ -0.88
RPAIN-204ENST00000405578 C6orf89Q6UWU4 347 aa9.56□□□□□ -0.88
RPAIN-204ENST00000405578 ZNF836Q6ZNA1 936 aa9.56□□□□□ -0.88
RPAIN-204ENST00000405578 RINLQ6ZS11 566 aa9.56□□□□□ -0.88
RPAIN-204ENST00000405578 GRAMD2AQ8IUY3 354 aa9.56□□□□□ -0.88
RPAIN-204ENST00000405578 SIAH3Q8IW03 269 aa9.56□□□□□ -0.88
RPAIN-204ENST00000405578 RNF148Q8N7C7 305 aa9.56□□□□□ -0.88
RPAIN-204ENST00000405578 FAM71CQ8NEG0 241 aa9.56□□□□□ -0.88
RPAIN-204ENST00000405578 FBXO27Q8NI29 283 aa9.56□□□□□ -0.88
RPAIN-204ENST00000405578 NANOS1Q8WY41 292 aaKnown RBP9.56□□□□□ -0.88
RPAIN-204ENST00000405578 CNOT9Q92600 299 aaKnown RBP9.56□□□□□ -0.88
RPAIN-204ENST00000405578 PROX1Q92786 737 aa9.56□□□□□ -0.88
RPAIN-204ENST00000405578 FAM162AQ96A26 154 aa9.56□□□□□ -0.88
RPAIN-204ENST00000405578 MCUR1Q96AQ8 359 aa9.56□□□□□ -0.88
RPAIN-204ENST00000405578 ARSGQ96EG1 525 aa9.56□□□□□ -0.88
RPAIN-204ENST00000405578 SFXN2Q96NB2 322 aa9.56□□□□□ -0.88
RPAIN-204ENST00000405578 PIGQQ9BRB3 760 aa9.56□□□□□ -0.88
RPAIN-204ENST00000405578 RTN4RQ9BZR6 473 aa9.56□□□□□ -0.88
RPAIN-204ENST00000405578 OR2B2Q9GZK3 357 aa9.56□□□□□ -0.88
RPAIN-204ENST00000405578 MUC13Q9H3R2 512 aa9.56□□□□□ -0.88
RPAIN-204ENST00000405578 TAS2R1Q9NYW7 299 aa9.56□□□□□ -0.88
RPAIN-204ENST00000405578 RPS6KA6Q9UK32 745 aa9.56□□□□□ -0.88
RPAIN-204ENST00000405578 ICAM5Q9UMF0 924 aa9.56□□□□□ -0.88
RPAIN-204ENST00000405578 SLC9A8Q9Y2E8 581 aa9.56□□□□□ -0.88
RPAIN-204ENST00000405578 AKAP6Q13023 2319 aa9.56□□□□□ -0.88
RPAIN-204ENST00000405578 ZNF469Q96JG9 3925 aaPredicted RBP9.55□□□□□ -0.88
RPAIN-204ENST00000405578 RTTNQ86VV8 2226 aa9.55□□□□□ -0.88
RPAIN-204ENST00000405578 OR14I1A6ND48 311 aa9.55□□□□□ -0.88
RPAIN-204ENST00000405578 CLDN24A6NM45 220 aa9.55□□□□□ -0.88
RPAIN-204ENST00000405578 SYT5O00445 386 aa9.55□□□□□ -0.88
RPAIN-204ENST00000405578 CLDN14O95500 239 aa9.55□□□□□ -0.88
RPAIN-204ENST00000405578 ACTL6AO96019 429 aa9.55□□□□□ -0.88
RPAIN-204ENST00000405578 IGHG3P01860 377 aa9.55□□□□□ -0.88
RPAIN-204ENST00000405578 C8BP07358 591 aa9.55□□□□□ -0.88
RPAIN-204ENST00000405578 ZNF17P17021 662 aa9.55□□□□□ -0.88
RPAIN-204ENST00000405578 AGAP20933 346 aa9.55□□□□□ -0.88
RPAIN-204ENST00000405578 ME2P23368 584 aa9.55□□□□□ -0.88
RPAIN-204ENST00000405578 MST1P26927 711 aa9.55□□□□□ -0.88
RPAIN-204ENST00000405578 ADH6P28332 368 aa9.55□□□□□ -0.88
RPAIN-204ENST00000405578 RYKP34925 604 aa9.55□□□□□ -0.88
RPAIN-204ENST00000405578 HTR3AP46098 478 aa9.55□□□□□ -0.88
RPAIN-204ENST00000405578 CASP6P55212 293 aa9.55□□□□□ -0.88
RPAIN-204ENST00000405578 RGS8P57771 180 aaPredicted RBP9.55□□□□□ -0.88
RPAIN-204ENST00000405578 GLYATQ6IB77 296 aa9.55□□□□□ -0.88
RPAIN-204ENST00000405578 CBLN3Q6UW01 205 aa9.55□□□□□ -0.88
RPAIN-204ENST00000405578 ENPP6Q6UWR7 440 aa9.55□□□□□ -0.88
RPAIN-204ENST00000405578 MEX3BQ6ZN04 569 aaKnown RBP9.55□□□□□ -0.88
RPAIN-204ENST00000405578 TRILQ7L0X0 811 aa9.55□□□□□ -0.88
RPAIN-204ENST00000405578 YRDCQ86U90 279 aaKnown RBP9.55□□□□□ -0.88
RPAIN-204ENST00000405578 RANBP3LQ86VV4 465 aaPredicted RBP9.55□□□□□ -0.88
RPAIN-204ENST00000405578 SMYD1Q8NB12 490 aa9.55□□□□□ -0.88
RPAIN-204ENST00000405578 FAM83FQ8NEG4 500 aaPredicted RBP9.55□□□□□ -0.88
RPAIN-204ENST00000405578 NEIL3Q8TAT5 605 aa9.55□□□□□ -0.88
RPAIN-204ENST00000405578 ST8SIA1Q92185 356 aa9.55□□□□□ -0.88
RPAIN-204ENST00000405578 POP5Q969H6 163 aaKnown RBP9.55□□□□□ -0.88
RPAIN-204ENST00000405578 SARAFQ96BY9 339 aa9.55□□□□□ -0.88
RPAIN-204ENST00000405578 SPOCK3Q9BQ16 436 aa9.55□□□□□ -0.88
RPAIN-204ENST00000405578 THTPAQ9BU02 230 aa9.55□□□□□ -0.88
RPAIN-204ENST00000405578 GSX1Q9H4S2 264 aaPredicted RBP9.55□□□□□ -0.88
RPAIN-204ENST00000405578 SERINC1Q9NRX5 453 aa9.55□□□□□ -0.88
RPAIN-204ENST00000405578 MED17Q9NVC6 651 aa9.55□□□□□ -0.88
RPAIN-204ENST00000405578 RLIMQ9NVW2 624 aa9.55□□□□□ -0.88
RPAIN-204ENST00000405578 DNAJB12Q9NXW2 375 aaKnown RBP9.55□□□□□ -0.88
RPAIN-204ENST00000405578 SELENONQ9NZV5 590 aa9.55□□□□□ -0.88
RPAIN-204ENST00000405578 ACAD8Q9UKU7 415 aa9.55□□□□□ -0.88
RPAIN-204ENST00000405578 VDAC3Q9Y277 283 aa9.55□□□□□ -0.88
RPAIN-204ENST00000405578 RPH3AQ9Y2J0 694 aaPredicted RBP9.55□□□□□ -0.88
RPAIN-204ENST00000405578 SNX13Q9Y5W8 968 aa9.55□□□□□ -0.88
RPAIN-204ENST00000405578 C7orf72A4D263 438 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 C17orf51A8MQB3 221 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 FAAHO00519 579 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 AQP7O14520 342 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 PRRG2O14669 202 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 ADAM10O14672 748 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 BCKDKO14874 412 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 DNAJC8O75937 253 aaPredicted RBP9.54□□□□□ -0.88
RPAIN-204ENST00000405578 ZNF682O95780 498 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 OPN1SWP03999 348 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 CELA3AP09093 270 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 ABOP16442 354 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 GGT1P19440 569 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 CHMP24386 653 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 IFNA8P32881 189 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 PTGS2P35354 604 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 KCNJ5P48544 419 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 GABPB1Q06547 395 aaPredicted RBP9.54□□□□□ -0.88
RPAIN-204ENST00000405578 DMTNQ08495 405 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 QPRTQ15274 297 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 SF3B4Q15427 424 aaKnown RBP eCLIP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms