RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 BBS10Q8TAM1 723 aa17.25■□□□□ 0.35
RTN4-207ENST00000402434 FIG4Q92562 907 aa17.25■□□□□ 0.35
RTN4-207ENST00000402434 ENKD1Q9H0I2 346 aa17.25■□□□□ 0.35
RTN4-207ENST00000402434 TMEM185BQ9H7F4 350 aa17.25■□□□□ 0.35
RTN4-207ENST00000402434 ZNF232Q9UNY5 417 aa17.25■□□□□ 0.35
RTN4-207ENST00000402434 IFT52Q9Y366 437 aa17.25■□□□□ 0.35
RTN4-207ENST00000402434 CHST2Q9Y4C5 530 aa17.25■□□□□ 0.35
RTN4-207ENST00000402434 CAPN7Q9Y6W3 813 aa17.25■□□□□ 0.35
RTN4-207ENST00000402434 NBPF19A0A087WUL8 3843 aa17.25■□□□□ 0.35
RTN4-207ENST00000402434 CELSR2Q9HCU4 2923 aa17.25■□□□□ 0.35
RTN4-207ENST00000402434 BBIP1A8MTZ0 92 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 C5orf58C9J3I9 102 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 FAAHO00519 579 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 NPPAP01160 153 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 OPN1LWP04000 364 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 CRHP06850 196 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 TMIGD3P0DMS9 266 aaPredicted RBP17.24■□□□□ 0.35
RTN4-207ENST00000402434 BMP5P22003 454 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 SHC1P29353 583 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 RYKP34925 604 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 OPRM1P35372 400 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 GYS2P54840 703 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 CDK6Q00534 326 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 LARS2Q15031 903 aaKnown RBP17.24■□□□□ 0.35
RTN4-207ENST00000402434 PON3Q15166 354 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 SGCBQ16585 318 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 TRMT5Q32P41 509 aaKnown RBP17.24■□□□□ 0.35
RTN4-207ENST00000402434 ZNF836Q6ZNA1 936 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 OR2V1Q8NHB1 315 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 NFKBIDQ8NI38 313 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 FNDC9Q8TBE3 224 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 KLHL15Q96M94 604 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 ELAC2Q9BQ52 826 aaKnown RBP17.24■□□□□ 0.35
RTN4-207ENST00000402434 CCDC106Q9BWC9 280 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 KAT8Q9H7Z6 458 aaKnown RBP17.24■□□□□ 0.35
RTN4-207ENST00000402434 RNF122Q9H9V4 155 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 NPDC1Q9NQX5 325 aaPredicted RBP17.24■□□□□ 0.35
RTN4-207ENST00000402434 ZNF443Q9Y2A4 671 aaPredicted RBP17.24■□□□□ 0.35
RTN4-207ENST00000402434 LOC100653049A0A140TA62 436 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 GMNCA6NCL1 334 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 GJE1A6NN92 205 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 CCDC22O60826 627 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 KRT34O76011 436 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 IGFBP2P18065 325 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 DRD4P21917 467 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 APOBEC1P41238 236 aaKnown RBP17.24■□□□□ 0.35
RTN4-207ENST00000402434 EIF1AXP47813 144 aaKnown RBP17.24■□□□□ 0.35
RTN4-207ENST00000402434 SELENBP1Q13228 472 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 CYLC2Q14093 348 aaPredicted RBP17.24■□□□□ 0.35
RTN4-207ENST00000402434 SELPLGQ14242 412 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 ZNF787Q6DD87 383 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 OR2A2Q6IF42 318 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 PLEKHM3Q6ZWE6 761 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 SNX32Q86XE0 403 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 ZNF440Q8IYI8 595 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 INTS12Q96CB8 462 aaKnown RBP17.24■□□□□ 0.35
RTN4-207ENST00000402434 SFXN3Q9BWM7 321 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 SPATA9Q9BWV2 254 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 RSPO3Q9BXY4 272 aaPredicted RBP17.24■□□□□ 0.35
RTN4-207ENST00000402434 TRIM8Q9BZR9 551 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 ARMCX1Q9P291 453 aa17.24■□□□□ 0.35
RTN4-207ENST00000402434 CFAP73A6NFT4 308 aa17.23■□□□□ 0.35
RTN4-207ENST00000402434 FXYD1O00168 92 aa17.23■□□□□ 0.35
RTN4-207ENST00000402434 TNFSF11O14788 317 aa17.23■□□□□ 0.35
RTN4-207ENST00000402434 SNX3O60493 162 aa17.23■□□□□ 0.35
RTN4-207ENST00000402434 PABPC4LP0CB38 370 aaKnown RBP17.23■□□□□ 0.35
RTN4-207ENST00000402434 SLC6A2P23975 617 aa17.23■□□□□ 0.35
RTN4-207ENST00000402434 SFTPDP35247 375 aa17.23■□□□□ 0.35
RTN4-207ENST00000402434 ACAA2P42765 397 aaKnown RBP17.23■□□□□ 0.35
RTN4-207ENST00000402434 IDH2P48735 452 aaKnown RBP17.23■□□□□ 0.35
RTN4-207ENST00000402434 CARD18P57730 90 aa17.23■□□□□ 0.35
RTN4-207ENST00000402434 MTPNP58546 118 aa17.23■□□□□ 0.35
RTN4-207ENST00000402434 RBBP4Q09028 425 aa17.23■□□□□ 0.35
RTN4-207ENST00000402434 MERTKQ12866 999 aa17.23■□□□□ 0.35
RTN4-207ENST00000402434 EPS8Q12929 822 aa17.23■□□□□ 0.35
RTN4-207ENST00000402434 SCARB2Q14108 478 aa17.23■□□□□ 0.35
RTN4-207ENST00000402434 CAPRIN1Q14444 709 aaKnown RBP17.23■□□□□ 0.35
RTN4-207ENST00000402434 TMEM176BQ3YBM2 270 aaPredicted RBP17.23■□□□□ 0.35
RTN4-207ENST00000402434 FBXL19-AS1Q494R0 122 aa17.23■□□□□ 0.35
RTN4-207ENST00000402434 PDSS1Q5T2R2 415 aa17.23■□□□□ 0.35
RTN4-207ENST00000402434 EEF1A1P5Q5VTE0 462 aa17.23■□□□□ 0.35
RTN4-207ENST00000402434 HBMQ6B0K9 141 aa17.23■□□□□ 0.35
RTN4-207ENST00000402434 NANOGP8Q6NSW7 305 aa17.23■□□□□ 0.35
RTN4-207ENST00000402434 C3orf33Q6P1S2 294 aa17.23■□□□□ 0.35
RTN4-207ENST00000402434 GRINAQ7Z429 371 aa17.23■□□□□ 0.35
RTN4-207ENST00000402434 P4HA3Q7Z4N8 544 aa17.23■□□□□ 0.35
RTN4-207ENST00000402434 PTOV1Q86YD1 416 aa17.23■□□□□ 0.35
RTN4-207ENST00000402434 GCNT2Q8N0V5 402 aa17.23■□□□□ 0.35
RTN4-207ENST00000402434 CLIP4Q8N3C7 705 aa17.23■□□□□ 0.35
RTN4-207ENST00000402434 ZNF563Q8TA94 476 aa17.23■□□□□ 0.35
RTN4-207ENST00000402434 OSTF1Q92882 214 aa17.23■□□□□ 0.35
RTN4-207ENST00000402434 LRRC58Q96CX6 371 aa17.23■□□□□ 0.35
RTN4-207ENST00000402434 SPOCK3Q9BQ16 436 aa17.23■□□□□ 0.35
RTN4-207ENST00000402434 ARMC7Q9H6L4 198 aa17.23■□□□□ 0.35
RTN4-207ENST00000402434 NANOGQ9H9S0 305 aa17.23■□□□□ 0.35
RTN4-207ENST00000402434 SERINC1Q9NRX5 453 aa17.23■□□□□ 0.35
RTN4-207ENST00000402434 JKAMPQ9P055 326 aa17.23■□□□□ 0.35
RTN4-207ENST00000402434 SYT5O00445 386 aa17.22■□□□□ 0.35
RTN4-207ENST00000402434 AP3D1O14617 1153 aa17.22■□□□□ 0.35
RTN4-207ENST00000402434 MRASO14807 208 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms