RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 ZFP90Q8TF47 636 aa11.98□□□□□ -0.49
VCX3A-202ENST00000398729 TMEM234Q8WY98 164 aa11.98□□□□□ -0.49
VCX3A-202ENST00000398729 ROBO4Q8WZ75 1007 aa11.98□□□□□ -0.49
VCX3A-202ENST00000398729 ROPN1LQ96C74 230 aa11.98□□□□□ -0.49
VCX3A-202ENST00000398729 TLCD1Q96CP7 247 aa11.98□□□□□ -0.49
VCX3A-202ENST00000398729 OR52E6Q96RD3 313 aa11.98□□□□□ -0.49
VCX3A-202ENST00000398729 THUMPD3Q9BV44 507 aaKnown RBP11.98□□□□□ -0.49
VCX3A-202ENST00000398729 WDR55Q9H6Y2 383 aaPredicted RBP11.98□□□□□ -0.49
VCX3A-202ENST00000398729 MANSC1Q9H8J5 431 aa11.98□□□□□ -0.49
VCX3A-202ENST00000398729 C6orf203Q9P0P8 240 aaPredicted RBP11.98□□□□□ -0.49
VCX3A-202ENST00000398729 SLC35A3Q9Y2D2 325 aa11.98□□□□□ -0.49
VCX3A-202ENST00000398729 GPR45Q9Y5Y3 372 aa11.98□□□□□ -0.49
VCX3A-202ENST00000398729 ARID1AO14497 2285 aa11.97□□□□□ -0.49
VCX3A-202ENST00000398729 CENPVL1A0A0U1RR11 272 aa11.97□□□□□ -0.49
VCX3A-202ENST00000398729 CCDC154A6NI56 674 aa11.97□□□□□ -0.49
VCX3A-202ENST00000398729 C9JVG2 144 aa11.97□□□□□ -0.49
VCX3A-202ENST00000398729 ETV2O00321 342 aaPredicted RBP11.97□□□□□ -0.49
VCX3A-202ENST00000398729 ATE1O95260 518 aa11.97□□□□□ -0.49
VCX3A-202ENST00000398729 UBTFL6P0CB48 400 aaPredicted RBP11.97□□□□□ -0.49
VCX3A-202ENST00000398729 IDO1P14902 403 aa11.97□□□□□ -0.49
VCX3A-202ENST00000398729 PGCP20142 388 aa11.97□□□□□ -0.49
VCX3A-202ENST00000398729 CRYGSP22914 178 aa11.97□□□□□ -0.49
VCX3A-202ENST00000398729 IL12AP29459 219 aa11.97□□□□□ -0.49
VCX3A-202ENST00000398729 AGTR1P30556 359 aa11.97□□□□□ -0.49
VCX3A-202ENST00000398729 ANXA11P50995 505 aaKnown RBP11.97□□□□□ -0.49
VCX3A-202ENST00000398729 TXNL4AP83876 142 aaKnown RBP11.97□□□□□ -0.49
VCX3A-202ENST00000398729 GPAT3Q53EU6 434 aa11.97□□□□□ -0.49
VCX3A-202ENST00000398729 TMEM201Q5SNT2 666 aa11.97□□□□□ -0.49
VCX3A-202ENST00000398729 C3orf33Q6P1S2 294 aa11.97□□□□□ -0.49
VCX3A-202ENST00000398729 ZNF621Q6ZSS3 439 aa11.97□□□□□ -0.49
VCX3A-202ENST00000398729 PRIMA1Q86XR5 153 aa11.97□□□□□ -0.49
VCX3A-202ENST00000398729 KRTAP1-3Q8IUG1 177 aa11.97□□□□□ -0.49
VCX3A-202ENST00000398729 ZNF619Q8N2I2 560 aa11.97□□□□□ -0.49
VCX3A-202ENST00000398729 GLB1L3Q8NCI6 653 aaPredicted RBP11.97□□□□□ -0.49
VCX3A-202ENST00000398729 ABHD3Q8WU67 409 aa11.97□□□□□ -0.49
VCX3A-202ENST00000398729 ST8SIA1Q92185 356 aa11.97□□□□□ -0.49
VCX3A-202ENST00000398729 ZNF524Q96C55 264 aa11.97□□□□□ -0.49
VCX3A-202ENST00000398729 ZC3HAV1LQ96H79 300 aaKnown RBP11.97□□□□□ -0.49
VCX3A-202ENST00000398729 SRXN1Q9BYN0 137 aa11.97□□□□□ -0.49
VCX3A-202ENST00000398729 SAP130Q9H0E3 1048 aa11.97□□□□□ -0.49
VCX3A-202ENST00000398729 C12orf49Q9H741 205 aa11.97□□□□□ -0.49
VCX3A-202ENST00000398729 SERINC1Q9NRX5 453 aa11.97□□□□□ -0.49
VCX3A-202ENST00000398729 HEATR5AQ86XA9 2040 aa11.97□□□□□ -0.49
VCX3A-202ENST00000398729 NBEAL1Q6ZS30 2694 aa11.97□□□□□ -0.49
VCX3A-202ENST00000398729 A0A1W2PPR1 153 aa11.96□□□□□ -0.49
VCX3A-202ENST00000398729 KIAA1324LA8MWY0 1029 aaPredicted RBP11.96□□□□□ -0.49
VCX3A-202ENST00000398729 DEFB108AA8MXU0 73 aa11.96□□□□□ -0.49
VCX3A-202ENST00000398729 DNAJA2O60884 412 aa11.96□□□□□ -0.49
VCX3A-202ENST00000398729 NID1P14543 1247 aa11.96□□□□□ -0.49
VCX3A-202ENST00000398729 PPP3CBP16298 524 aa11.96□□□□□ -0.49
VCX3A-202ENST00000398729 PGM1P36871 562 aa11.96□□□□□ -0.49
VCX3A-202ENST00000398729 SESN3P58005 492 aa11.96□□□□□ -0.49
VCX3A-202ENST00000398729 RAC3P60763 192 aa11.96□□□□□ -0.49
VCX3A-202ENST00000398729 FUT5Q11128 374 aa11.96□□□□□ -0.49
VCX3A-202ENST00000398729 MAPK14Q16539 360 aa11.96□□□□□ -0.49
VCX3A-202ENST00000398729 DEFB113Q30KQ7 82 aa11.96□□□□□ -0.49
VCX3A-202ENST00000398729 TIGD2Q4W5G0 525 aa11.96□□□□□ -0.49
VCX3A-202ENST00000398729 PDCD4Q53EL6 469 aaKnown RBP11.96□□□□□ -0.49
VCX3A-202ENST00000398729 AP1ARQ63HQ0 302 aa11.96□□□□□ -0.49
VCX3A-202ENST00000398729 ANKRD34AQ69YU3 496 aa11.96□□□□□ -0.49
VCX3A-202ENST00000398729 FRRS1Q6ZNA5 592 aa11.96□□□□□ -0.49
VCX3A-202ENST00000398729 FCRLAQ7L513 359 aa11.96□□□□□ -0.49
VCX3A-202ENST00000398729 RNF130Q86XS8 419 aa11.96□□□□□ -0.49
VCX3A-202ENST00000398729 SLC43A2Q8N370 569 aa11.96□□□□□ -0.49
VCX3A-202ENST00000398729 FAM71CQ8NEG0 241 aa11.96□□□□□ -0.49
VCX3A-202ENST00000398729 PIWIL2Q8TC59 973 aaKnown RBP11.96□□□□□ -0.49
VCX3A-202ENST00000398729 PIK3IP1Q96FE7 263 aa11.96□□□□□ -0.49
VCX3A-202ENST00000398729 MAELQ96JY0 434 aaKnown RBP11.96□□□□□ -0.49
VCX3A-202ENST00000398729 C18orf12Q96KH6 178 aa11.96□□□□□ -0.49
VCX3A-202ENST00000398729 INPP5KQ9BT40 448 aa11.96□□□□□ -0.49
VCX3A-202ENST00000398729 COQ10BQ9H8M1 238 aa11.96□□□□□ -0.49
VCX3A-202ENST00000398729 GP6Q9HCN6 339 aa11.96□□□□□ -0.49
VCX3A-202ENST00000398729 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.96□□□□□ -0.49
VCX3A-202ENST00000398729 KLHL13Q9P2N7 655 aa11.96□□□□□ -0.49
VCX3A-202ENST00000398729 LIPT1Q9Y234 373 aa11.96□□□□□ -0.49
VCX3A-202ENST00000398729 MXRA5Q9NR99 2828 aa11.95□□□□□ -0.5
VCX3A-202ENST00000398729 A0A1W2PNR3 127 aa11.95□□□□□ -0.5
VCX3A-202ENST00000398729 HMGN4O00479 90 aa11.95□□□□□ -0.5
VCX3A-202ENST00000398729 RFXANKO14593 260 aa11.95□□□□□ -0.5
VCX3A-202ENST00000398729 KLF11O14901 512 aa11.95□□□□□ -0.5
VCX3A-202ENST00000398729 SIAH2O43255 324 aa11.95□□□□□ -0.5
VCX3A-202ENST00000398729 SLC22A3O75751 556 aa11.95□□□□□ -0.5
VCX3A-202ENST00000398729 PRKD3O94806 890 aa11.95□□□□□ -0.5
VCX3A-202ENST00000398729 H6PDO95479 791 aa11.95□□□□□ -0.5
VCX3A-202ENST00000398729 IL6P05231 212 aa11.95□□□□□ -0.5
VCX3A-202ENST00000398729 CDKN2CP42773 168 aa11.95□□□□□ -0.5
VCX3A-202ENST00000398729 KCNJ10P78508 379 aa11.95□□□□□ -0.5
VCX3A-202ENST00000398729 MERTKQ12866 999 aa11.95□□□□□ -0.5
VCX3A-202ENST00000398729 GSTA3Q16772 222 aa11.95□□□□□ -0.5
VCX3A-202ENST00000398729 SLC9B1Q4ZJI4 515 aa11.95□□□□□ -0.5
VCX3A-202ENST00000398729 AGBL2Q5U5Z8 902 aa11.95□□□□□ -0.5
VCX3A-202ENST00000398729 STAC2Q6ZMT1 411 aa11.95□□□□□ -0.5
VCX3A-202ENST00000398729 TUSC5Q8IXB3 177 aa11.95□□□□□ -0.5
VCX3A-202ENST00000398729 ZNF563Q8TA94 476 aa11.95□□□□□ -0.5
VCX3A-202ENST00000398729 ZG16BQ96DA0 208 aa11.95□□□□□ -0.5
VCX3A-202ENST00000398729 TRNT1Q96Q11 434 aaKnown RBP11.95□□□□□ -0.5
VCX3A-202ENST00000398729 OR5B2Q96R09 309 aa11.95□□□□□ -0.5
VCX3A-202ENST00000398729 TACO1Q9BSH4 297 aaKnown RBP11.95□□□□□ -0.5
VCX3A-202ENST00000398729 QRSL1Q9H0R6 528 aaKnown RBP11.95□□□□□ -0.5
VCX3A-202ENST00000398729 ACER3Q9NUN7 267 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms