RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 NKX6-2Q9C056 277 aaPredicted RBP8.29□□□□□ -1.08
SHROOM4-202ENST00000376020 CARS2Q9HA77 564 aaKnown RBP8.29□□□□□ -1.08
SHROOM4-202ENST00000376020 ZMAT5Q9UDW3 170 aaKnown RBP8.29□□□□□ -1.08
SHROOM4-202ENST00000376020 CHRM2P08172 466 aa8.29□□□□□ -1.08
SHROOM4-202ENST00000376020 CX3CR1P49238 355 aa8.29□□□□□ -1.08
SHROOM4-202ENST00000376020 FXYD6P3P58550 94 aa8.29□□□□□ -1.08
SHROOM4-202ENST00000376020 RPS21P63220 83 aaKnown RBP8.29□□□□□ -1.08
SHROOM4-202ENST00000376020 PDCD11Q14690 1871 aaKnown RBP8.29□□□□□ -1.08
SHROOM4-202ENST00000376020 OR4C11Q6IEV9 310 aa8.29□□□□□ -1.08
SHROOM4-202ENST00000376020 ZNF322Q6U7Q0 402 aaPredicted RBP8.29□□□□□ -1.08
SHROOM4-202ENST00000376020 NRMQ8IXM6 262 aa8.29□□□□□ -1.08
SHROOM4-202ENST00000376020 TM9SF4Q92544 642 aa8.29□□□□□ -1.08
SHROOM4-202ENST00000376020 NDRG1Q92597 394 aaKnown RBP8.29□□□□□ -1.08
SHROOM4-202ENST00000376020 NEURL2Q9BR09 285 aa8.29□□□□□ -1.08
SHROOM4-202ENST00000376020 DMRT3Q9NQL9 472 aa8.29□□□□□ -1.08
SHROOM4-202ENST00000376020 DRGXA6NNA5 263 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 A8MX80 341 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 ZNF195O14628 629 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 LILRB3O75022 631 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 ALDH3B1P43353 468 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 CLCNKAP51800 687 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 F2RL1P55085 397 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 ERVK-21P61565 698 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 TOMM20Q15388 145 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 PRICKLE2Q7Z3G6 844 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 SPICQ8N5J4 248 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 OR4K17Q8NGC6 315 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 KCNG3Q8TAE7 436 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 SPTSSAQ969W0 71 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 MCOLN1Q9GZU1 580 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 QRSL1Q9H0R6 528 aaKnown RBP8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 TAL1P17542 331 aaPredicted RBP8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 EMC4Q5J8M3 183 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 GRHL3Q8TE85 626 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 KHSRPQ92945 711 aaKnown RBP eCLIP8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 FAM46AQ96IP4 442 aaKnown RBP8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 COL24A1Q17RW2 1714 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 ZNF561Q8N587 486 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 OR6F1Q8NGZ6 308 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 FIBINQ8TAL6 211 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 ZBTB8AQ96BR9 441 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 PKMYT1Q99640 499 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 C2orf42Q9NWW7 574 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 EVX1P49640 407 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 EPHA4P54764 986 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 MZT1Q08AG7 82 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 APOOLQ6UXV4 268 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 PCYT2Q99447 389 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 SLC6A17Q9H1V8 727 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 RNF215Q9Y6U7 377 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 H7C1Q1 480 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 K7EPK0 472 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 CH25HO95992 272 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 H2BFMP0C1H6 154 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 KIR2DS3Q14952 304 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 LTB4RQ15722 352 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 PUS10Q3MIT2 529 aaKnown RBP8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 GTDC1Q4AE62 458 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 PAN3Q58A45 887 aaKnown RBP8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 FAM71E2Q8N5Q1 922 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 OR6M1Q8NGM8 313 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 OR13C3Q8NGS6 347 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 OIT3Q8WWZ8 545 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 ICKQ9UPZ9 632 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 STRAPQ9Y3F4 350 aaKnown RBP8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 SIRPAP78324 504 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 MSMO1Q15800 293 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 LSMEM2Q8N112 164 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 STPG2Q8N412 459 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 CASTOR1Q8WTX7 329 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 APH1BQ8WW43 257 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 SMPDL3BQ92485 455 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 YIPF6Q96EC8 236 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 MICU1Q9BPX6 476 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 MARCH4Q9P2E8 410 aaPredicted RBP8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 HMSDA8MTL9 139 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 SYT7O43581 403 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 KLK8O60259 260 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 AOAHP28039 575 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 PIGFQ07326 219 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 TMEM31Q5JXX7 168 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 CREB3L4Q8TEY5 395 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 SMIM4Q8WVI0 70 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 TBX5Q99593 518 aa8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 ZNF107Q9UII5 783 aaPredicted RBP8.28□□□□□ -1.08
SHROOM4-202ENST00000376020 PCNX1Q96RV3 2341 aa8.27□□□□□ -1.08
SHROOM4-202ENST00000376020 TRAV1-2A0A0B4J238 106 aa8.27□□□□□ -1.08
SHROOM4-202ENST00000376020 MBLAC1A4D2B0 266 aaPredicted RBP8.27□□□□□ -1.08
SHROOM4-202ENST00000376020 BLOC1S5-TXNDC5H3BN57 136 aa8.27□□□□□ -1.08
SHROOM4-202ENST00000376020 PQBP1O60828 265 aaKnown RBP8.27□□□□□ -1.08
SHROOM4-202ENST00000376020 RPP14O95059 124 aaKnown RBP8.27□□□□□ -1.08
SHROOM4-202ENST00000376020 HNF1BP35680 557 aa8.27□□□□□ -1.08
SHROOM4-202ENST00000376020 MMP15P51511 669 aa8.27□□□□□ -1.08
SHROOM4-202ENST00000376020 LUMP51884 338 aaPredicted RBP8.27□□□□□ -1.08
SHROOM4-202ENST00000376020 SNRPD2P62316 118 aaKnown RBP8.27□□□□□ -1.08
SHROOM4-202ENST00000376020 RPL23AP62750 156 aaKnown RBP8.27□□□□□ -1.08
SHROOM4-202ENST00000376020 SORDQ00796 357 aa8.27□□□□□ -1.08
SHROOM4-202ENST00000376020 SP2Q02086 613 aa8.27□□□□□ -1.08
SHROOM4-202ENST00000376020 CTF1Q16619 201 aa8.27□□□□□ -1.08
SHROOM4-202ENST00000376020 TEX261Q6UWH6 196 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms