RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 ZNF20P17024 532 aa4.94□□□□□ -1.62
SMNDC1-202ENST00000369603 MMP11P24347 488 aa4.94□□□□□ -1.62
SMNDC1-202ENST00000369603 PCBP4P57723 403 aaKnown RBP4.94□□□□□ -1.62
SMNDC1-202ENST00000369603 ERV3-1Q14264 604 aa4.94□□□□□ -1.62
SMNDC1-202ENST00000369603 SF3B4Q15427 424 aaKnown RBP eCLIP4.94□□□□□ -1.626e-7■■■■□ 20.9
SMNDC1-202ENST00000369603 ELAVL1Q15717 326 aaKnown RBP4.94□□□□□ -1.62
SMNDC1-202ENST00000369603 ZIC1Q15915 447 aa4.94□□□□□ -1.62
SMNDC1-202ENST00000369603 TRMT12Q53H54 448 aaKnown RBP4.94□□□□□ -1.62
SMNDC1-202ENST00000369603 FAM219BQ5XKK7 198 aa4.94□□□□□ -1.62
SMNDC1-202ENST00000369603 ZNF425Q6IV72 752 aa4.94□□□□□ -1.62
SMNDC1-202ENST00000369603 LRRN1Q6UXK5 716 aa4.94□□□□□ -1.62
SMNDC1-202ENST00000369603 TMEM92Q6UXU6 159 aa4.94□□□□□ -1.62
SMNDC1-202ENST00000369603 ZNF836Q6ZNA1 936 aa4.94□□□□□ -1.62
SMNDC1-202ENST00000369603 LINGO2Q7L985 606 aa4.94□□□□□ -1.62
SMNDC1-202ENST00000369603 ABI3BPQ7Z7G0 1075 aa4.94□□□□□ -1.62
SMNDC1-202ENST00000369603 ELMOD2Q8IZ81 293 aa4.94□□□□□ -1.62
SMNDC1-202ENST00000369603 MEIOBQ8N635 442 aa4.94□□□□□ -1.62
SMNDC1-202ENST00000369603 DIO2Q92813 273 aa4.94□□□□□ -1.62
SMNDC1-202ENST00000369603 RPL3LQ92901 407 aaKnown RBP4.94□□□□□ -1.62
SMNDC1-202ENST00000369603 KIAA1143Q96AT1 154 aaPredicted RBP4.94□□□□□ -1.62
SMNDC1-202ENST00000369603 IER2Q9BTL4 223 aa4.94□□□□□ -1.62
SMNDC1-202ENST00000369603 FN3KQ9H479 309 aa4.94□□□□□ -1.62
SMNDC1-202ENST00000369603 EGLN3Q9H6Z9 239 aa4.94□□□□□ -1.62
SMNDC1-202ENST00000369603 SEC61A2Q9H9S3 476 aa4.94□□□□□ -1.62
SMNDC1-202ENST00000369603 SRA1Q9HD15 236 aaKnown RBP4.94□□□□□ -1.62
SMNDC1-202ENST00000369603 A0A1B0GWA3 101 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 AGAP5A6NIR3 686 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 ZSCAN5BA6NJL1 495 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 ZAR1LA6NP61 321 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 HCRTR1O43613 425 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 SCRG1O75711 98 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 SULT1C4O75897 302 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 CHRM4P08173 479 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 FCARP24071 287 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 CRABP1P29762 137 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 GPR3P46089 330 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 DCDP81605 110 aaKnown RBP4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 RUNX2Q13950 521 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 SEC23BQ15437 767 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 SGCBQ16585 318 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 NKG7Q16617 165 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 FAM69BQ5VUD6 431 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 Q6ZS52 159 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 SHFQ7M4L6 423 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 CCDC28AQ8IWP9 274 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 CARFQ8N187 725 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 TOMM5Q8N4H5 51 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 FAM26EQ8N5C1 309 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 OR5T3Q8NGG3 340 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 OR4C15Q8NGM1 316 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 LILRB4Q8NHJ6 448 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 S100A16Q96FQ6 103 aaKnown RBP4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 SENP5Q96HI0 755 aaPredicted RBP4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 C7orf34Q96L11 122 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 NAA11Q9BSU3 229 aaPredicted RBP4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 HDHD5Q9BXW7 423 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 MED28Q9H204 178 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 TMEM138Q9NPI0 162 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 TAS2R10Q9NYW0 307 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 ZNF224Q9NZL3 707 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 UPB1Q9UBR1 384 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 HSPB11Q9Y547 144 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 PCDHGB2Q9Y5G2 931 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 FAM227AF5H4B4 570 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 PRAMEF4O60810 478 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 IL1AP01583 271 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 IFNA6P05013 189 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 SCG5P05408 212 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 SPARCP09486 303 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 GLB1P16278 677 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 UGT2B10P36537 528 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 CAPZA1P52907 286 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 CLRN1P58418 232 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 HSF2Q03933 536 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 FXNQ16595 210 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 PRAMEF9Q5VWM5 478 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 FBXO42Q6P3S6 717 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 ZNF793Q6ZN11 406 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 SLC46A3Q7Z3Q1 461 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 TMEM179BQ7Z7N9 219 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 FAM160A2Q8N612 972 aaPredicted RBP4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 GDPD1Q8N9F7 314 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 ASB15Q8WXK1 588 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 KLHL15Q96M94 604 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 FRMD6Q96NE9 622 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 ZNF582Q96NG8 517 aaPredicted RBP4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 OR2A5Q96R48 311 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 LRRC61Q9BV99 259 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 OR51E2Q9H255 320 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 RLIMQ9NVW2 624 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 BABAM2Q9NXR7 383 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 A3GALT2U3KPV4 340 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 DOCK4Q8N1I0 1966 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 MYOFQ9NZM1 2061 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 PIKFYVEQ9Y2I7 2098 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 A0A087WUU8 490 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 METTL21EPA6NDL7 271 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 A6NL46 340 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 GJE1A6NN92 205 aa4.93□□□□□ -1.62
SMNDC1-202ENST00000369603 CDC40O60508 579 aaKnown RBP eCLIP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms