RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 SAT2Q96F10 170 aaPredicted RBP13.97□□□□□ -0.17
LMX1B-201ENST00000355497 CBX7O95931 251 aa13.97□□□□□ -0.17
LMX1B-201ENST00000355497 XCR1P46094 333 aa13.97□□□□□ -0.17
LMX1B-201ENST00000355497 DEFA6Q01524 100 aa13.97□□□□□ -0.17
LMX1B-201ENST00000355497 HEPHL1Q6MZM0 1159 aa13.97□□□□□ -0.17
LMX1B-201ENST00000355497 MEX3DQ86XN8 651 aaKnown RBP13.97□□□□□ -0.17
LMX1B-201ENST00000355497 CMIPQ8IY22 773 aa13.97□□□□□ -0.17
LMX1B-201ENST00000355497 RBMXL1Q96E39 390 aaKnown RBP13.97□□□□□ -0.17
LMX1B-201ENST00000355497 FKRPQ9H9S5 495 aa13.97□□□□□ -0.17
LMX1B-201ENST00000355497 SCML1Q9UN30 329 aa13.97□□□□□ -0.17
LMX1B-201ENST00000355497 ZNF443Q9Y2A4 671 aaPredicted RBP13.97□□□□□ -0.17
LMX1B-201ENST00000355497 MEIS3P2A8K0S8 358 aa13.96□□□□□ -0.17
LMX1B-201ENST00000355497 NFKBIEO00221 500 aa13.96□□□□□ -0.17
LMX1B-201ENST00000355497 ZIC2O95409 532 aaPredicted RBP13.96□□□□□ -0.17
LMX1B-201ENST00000355497 HOXB5P09067 269 aa13.96□□□□□ -0.17
LMX1B-201ENST00000355497 HNRNPA2B1P22626 353 aaKnown RBP13.96□□□□□ -0.17
LMX1B-201ENST00000355497 VIPR2P41587 438 aa13.96□□□□□ -0.17
LMX1B-201ENST00000355497 WDR5P61964 334 aaKnown RBP13.96□□□□□ -0.17
LMX1B-201ENST00000355497 TLE1Q04724 770 aa13.96□□□□□ -0.17
LMX1B-201ENST00000355497 SPOCK1Q08629 439 aa13.96□□□□□ -0.17
LMX1B-201ENST00000355497 GALEQ14376 348 aa13.96□□□□□ -0.17
LMX1B-201ENST00000355497 MPEG1Q2M385 716 aa13.96□□□□□ -0.17
LMX1B-201ENST00000355497 ZNF322Q6U7Q0 402 aaPredicted RBP13.96□□□□□ -0.17
LMX1B-201ENST00000355497 SKA3Q8IX90 412 aa13.96□□□□□ -0.17
LMX1B-201ENST00000355497 CHST14Q8NCH0 376 aa13.96□□□□□ -0.17
LMX1B-201ENST00000355497 SIMC1Q8NDZ2 872 aa13.96□□□□□ -0.17
LMX1B-201ENST00000355497 OR7G3Q8NG95 312 aa13.96□□□□□ -0.17
LMX1B-201ENST00000355497 OR52R1Q8NGF1 315 aa13.96□□□□□ -0.17
LMX1B-201ENST00000355497 OR2M2Q96R28 347 aa13.96□□□□□ -0.17
LMX1B-201ENST00000355497 PITHD1Q9GZP4 211 aaPredicted RBP13.96□□□□□ -0.17
LMX1B-201ENST00000355497 ZNF286AQ9HBT8 521 aa13.96□□□□□ -0.17
LMX1B-201ENST00000355497 MYO5BQ9ULV0 1848 aa13.96□□□□□ -0.17
LMX1B-201ENST00000355497 TRAV27A0A087WT01 109 aa13.96□□□□□ -0.17
LMX1B-201ENST00000355497 CPOXP36551 454 aa13.96□□□□□ -0.17
LMX1B-201ENST00000355497 ETV6P41212 452 aa13.96□□□□□ -0.17
LMX1B-201ENST00000355497 UBE2KP61086 200 aa13.96□□□□□ -0.17
LMX1B-201ENST00000355497 SLC10A1Q14973 349 aa13.96□□□□□ -0.17
LMX1B-201ENST00000355497 PDLIM3Q53GG5 364 aaPredicted RBP13.96□□□□□ -0.17
LMX1B-201ENST00000355497 B3GNT8Q7Z7M8 397 aa13.96□□□□□ -0.17
LMX1B-201ENST00000355497 ASB17Q8WXJ9 295 aa13.96□□□□□ -0.17
LMX1B-201ENST00000355497 TCEAL2Q9H3H9 227 aaPredicted RBP13.96□□□□□ -0.17
LMX1B-201ENST00000355497 APOA2P02652 100 aa13.96□□□□□ -0.17
LMX1B-201ENST00000355497 ARG2P78540 354 aa13.96□□□□□ -0.17
LMX1B-201ENST00000355497 BTBD2Q9BX70 525 aa13.96□□□□□ -0.17
LMX1B-201ENST00000355497 FN3KRPQ9HA64 309 aa13.96□□□□□ -0.17
LMX1B-201ENST00000355497 CDHR4A6H8M9 788 aa13.96□□□□□ -0.17
LMX1B-201ENST00000355497 SORBS2O94875 1100 aaKnown RBP13.96□□□□□ -0.17
LMX1B-201ENST00000355497 PCBD1P61457 104 aa13.96□□□□□ -0.17
LMX1B-201ENST00000355497 C3orf38Q5JPI3 329 aa13.96□□□□□ -0.17
LMX1B-201ENST00000355497 MUL1Q969V5 352 aa13.96□□□□□ -0.17
LMX1B-201ENST00000355497 PCYT2Q99447 389 aa13.96□□□□□ -0.17
LMX1B-201ENST00000355497 RTP3Q9BQQ7 232 aa13.96□□□□□ -0.17
LMX1B-201ENST00000355497 PIAS3Q9Y6X2 628 aa13.96□□□□□ -0.17
LMX1B-201ENST00000355497 SLC22A23A1A5C7 686 aa13.96□□□□□ -0.18
LMX1B-201ENST00000355497 C20orf202A1L168 122 aa13.96□□□□□ -0.18
LMX1B-201ENST00000355497 A6NHS1 94 aa13.96□□□□□ -0.18
LMX1B-201ENST00000355497 ACPPP15309 386 aa13.96□□□□□ -0.18
LMX1B-201ENST00000355497 GDF1P27539 372 aa13.96□□□□□ -0.18
LMX1B-201ENST00000355497 TNK1Q13470 666 aa13.96□□□□□ -0.18
LMX1B-201ENST00000355497 IRF4Q15306 451 aa13.96□□□□□ -0.18
LMX1B-201ENST00000355497 DLK2Q6UY11 383 aa13.96□□□□□ -0.18
LMX1B-201ENST00000355497 ZNF852Q6ZMS4 543 aa13.96□□□□□ -0.18
LMX1B-201ENST00000355497 ZNF546Q86UE3 836 aa13.96□□□□□ -0.18
LMX1B-201ENST00000355497 TPSD1Q9BZJ3 242 aa13.96□□□□□ -0.18
LMX1B-201ENST00000355497 OBP2BQ9NPH6 170 aa13.96□□□□□ -0.18
LMX1B-201ENST00000355497 AGPAT4Q9NRZ5 378 aa13.96□□□□□ -0.18
LMX1B-201ENST00000355497 A0A0D9SG52 128 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 ZCWPW2A0A1B0GU75 182 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 SORDQ00796 357 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 APOOLQ6UXV4 268 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 TMEM184AQ6ZMB5 413 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 RFPL4BQ6ZWI9 263 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 SLC35F3Q8IY50 421 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 PARP16Q8N5Y8 322 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 METTL9Q9H1A3 318 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 OR52D1Q9H346 318 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 KLHL42Q9P2K6 505 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 AGAP14A8MT82 685 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 OR7A17O14581 309 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 MSTNO14793 375 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 RAB40ALP0C0E4 278 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 SDC1P18827 310 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 HOXC8P31273 242 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 ACTBL2Q562R1 376 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 CCNJQ5T5M9 372 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 ZNF691Q5VV52 312 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 LACC1Q8IV20 430 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 GIMAP1Q8WWP7 306 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 RAB40AQ8WXH6 277 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 TSSK2Q96PF2 358 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 MKRN2Q9H000 416 aaKnown RBP13.95□□□□□ -0.18
LMX1B-201ENST00000355497 GORASP2Q9H8Y8 452 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 SH3BGRL2Q9UJC5 107 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 SLC16A7O60669 478 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 EMP2P54851 167 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 PGGHGQ32M88 737 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 BEX5Q5H9J7 111 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 ENTPD8Q5MY95 495 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 BPIFB2Q8N4F0 458 aa13.95□□□□□ -0.18
LMX1B-201ENST00000355497 FAM160A2Q8N612 972 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 257.9 ms